RNA–Protein interactions for RNA: ENST00000520850.5

TNPO1-212, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 863 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-212ENST00000520850 IMUPQ9GZP8 106 aa7.69□□□□□ -1.18
TNPO1-212ENST00000520850 K7ERU9 68 aa7.68□□□□□ -1.18
TNPO1-212ENST00000520850 C5orf47Q569G3 176 aa7.68□□□□□ -1.18
TNPO1-212ENST00000520850 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
TNPO1-212ENST00000520850 S4R3F8 94 aa7.68□□□□□ -1.18
TNPO1-212ENST00000520850 MP68P56378 58 aa7.65□□□□□ -1.18
TNPO1-212ENST00000520850 CSAG1Q6PB30 78 aa7.65□□□□□ -1.18
TNPO1-212ENST00000520850 H3BPC8 53 aa7.63□□□□□ -1.19
TNPO1-212ENST00000520850 LCA10Q71F78 164 aa7.63□□□□□ -1.19
TNPO1-212ENST00000520850 LINC00208Q96KT6 92 aa7.62□□□□□ -1.19
TNPO1-212ENST00000520850 KRTAP4-2Q9BYR5 136 aa7.6□□□□□ -1.19
TNPO1-212ENST00000520850 USH2AO75445 5202 aa7.59□□□□□ -1.19
TNPO1-212ENST00000520850 A8MUN3 132 aa7.59□□□□□ -1.19
TNPO1-212ENST00000520850 SCGB1A1P11684 91 aa7.59□□□□□ -1.19
TNPO1-212ENST00000520850 KLKP1Q107X0 134 aa7.54□□□□□ -1.2
TNPO1-212ENST00000520850 MT-ATP8P03928 68 aa7.53□□□□□ -1.2
TNPO1-212ENST00000520850 SMIM20Q8N5G0 67 aa7.52□□□□□ -1.21
TNPO1-212ENST00000520850 SSPOA2VEC9 5147 aa7.49□□□□□ -1.21
TNPO1-212ENST00000520850 NDUFC1O43677 76 aa7.47□□□□□ -1.21
TNPO1-212ENST00000520850 TRAV7A0A075B6U4 112 aa7.45□□□□□ -1.22
TNPO1-212ENST00000520850 FAM236AA0A1B0GUQ0 79 aa7.45□□□□□ -1.22
TNPO1-212ENST00000520850 FAM236BA0A1B0GV22 79 aa7.45□□□□□ -1.22
TNPO1-212ENST00000520850 H0YAA0 97 aa7.43□□□□□ -1.22
TNPO1-212ENST00000520850 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
TNPO1-212ENST00000520850 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
TNPO1-212ENST00000520850 SPRR2GQ9BYE4 73 aa7.4□□□□□ -1.22
TNPO1-212ENST00000520850 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
TNPO1-212ENST00000520850 CRIPTQ9P021 101 aa7.39□□□□□ -1.23
TNPO1-212ENST00000520850 KRTAP4-11Q9BYQ6 195 aa7.38□□□□□ -1.23
TNPO1-212ENST00000520850 KRTAP19-8Q3LI54 63 aa7.31□□□□□ -1.24
TNPO1-212ENST00000520850 FCGBPQ9Y6R7 5405 aaPredicted RBP7.31□□□□□ -1.24
TNPO1-212ENST00000520850 ACYP2P14621 99 aa7.27□□□□□ -1.25
TNPO1-212ENST00000520850 SERP2Q8N6R1 65 aa7.27□□□□□ -1.25
TNPO1-212ENST00000520850 Q5VV11 94 aa7.25□□□□□ -1.25
TNPO1-212ENST00000520850 MT1BP07438 61 aa7.24□□□□□ -1.25
TNPO1-212ENST00000520850 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
TNPO1-212ENST00000520850 SPANXA2-OT1Q8N9U9 137 aa7.2□□□□□ -1.26
TNPO1-212ENST00000520850 SNURFQ9Y675 71 aa7.19□□□□□ -1.26
TNPO1-212ENST00000520850 KRTAP9-7A8MTY7 169 aa7.17□□□□□ -1.26
TNPO1-212ENST00000520850 C20orf197Q8N268 126 aa7.17□□□□□ -1.26
TNPO1-212ENST00000520850 SPTSSBQ8NFR3 76 aa7.15□□□□□ -1.26
TNPO1-212ENST00000520850 COX7CP15954 63 aa7.09□□□□□ -1.27
TNPO1-212ENST00000520850 P0C880 135 aa7.08□□□□□ -1.28
TNPO1-212ENST00000520850 LCE5AQ5TCM9 118 aa7.08□□□□□ -1.28
TNPO1-212ENST00000520850 A6NN06 94 aa7.07□□□□□ -1.28
TNPO1-212ENST00000520850 CHKB-CPT1BH3BT56 60 aa7.06□□□□□ -1.28
TNPO1-212ENST00000520850 KRTAP10-5P60370 271 aa7.06□□□□□ -1.28
TNPO1-212ENST00000520850 R4GN34 69 aa7.06□□□□□ -1.28
TNPO1-212ENST00000520850 MACF1Q9UPN3 7388 aaKnown RBP7□□□□□ -1.29
TNPO1-212ENST00000520850 M0QZ58 72 aa6.97□□□□□ -1.29
TNPO1-212ENST00000520850 H7BZZ5 65 aa6.94□□□□□ -1.3
TNPO1-212ENST00000520850 PLAC4Q8WY50 150 aa6.94□□□□□ -1.3
TNPO1-212ENST00000520850 KRTAP5-3Q6L8H2 238 aa6.93□□□□□ -1.3
TNPO1-212ENST00000520850 KRTAP6-3Q3LI67 103 aa6.9□□□□□ -1.3
TNPO1-212ENST00000520850 COA5Q86WW8 74 aa6.9□□□□□ -1.3
TNPO1-212ENST00000520850 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
TNPO1-212ENST00000520850 ANAPC13Q9BS18 74 aa6.89□□□□□ -1.31
TNPO1-212ENST00000520850 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
TNPO1-212ENST00000520850 SYNE2Q8WXH0 6885 aaKnown RBP6.87□□□□□ -1.31
TNPO1-212ENST00000520850 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
TNPO1-212ENST00000520850 MT1XP80297 61 aa6.83□□□□□ -1.32
TNPO1-212ENST00000520850 LINC01554Q52M75 96 aa6.81□□□□□ -1.32
TNPO1-212ENST00000520850 SEC61GP60059 68 aa6.75□□□□□ -1.33
TNPO1-212ENST00000520850 SERP1Q9Y6X1 66 aa6.74□□□□□ -1.33
TNPO1-212ENST00000520850 CCDC179H3BU77 68 aa6.72□□□□□ -1.33
TNPO1-212ENST00000520850 KRTAP12-2P59991 146 aa6.71□□□□□ -1.34
TNPO1-212ENST00000520850 KRTAP5-9P26371 169 aa6.69□□□□□ -1.34
TNPO1-212ENST00000520850 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
TNPO1-212ENST00000520850 KRTAP13-4Q3LI77 160 aa6.68□□□□□ -1.34
TNPO1-212ENST00000520850 A0A1B0GU33 70 aa6.61□□□□□ -1.35
TNPO1-212ENST00000520850 A0A1B0GU69 56 aa6.56□□□□□ -1.36
TNPO1-212ENST00000520850 TMEM258P61165 79 aa6.55□□□□□ -1.36
TNPO1-212ENST00000520850 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
TNPO1-212ENST00000520850 KRTAP10-12P60413 245 aa6.54□□□□□ -1.36
TNPO1-212ENST00000520850 KMT2DO14686 5537 aa6.52□□□□□ -1.37
TNPO1-212ENST00000520850 SPATA8Q6RVD6 105 aa6.51□□□□□ -1.37
TNPO1-212ENST00000520850 KRTAP10-7P60409 375 aaPredicted RBP6.49□□□□□ -1.37
TNPO1-212ENST00000520850 CAMK2N1Q7Z7J9 78 aa6.49□□□□□ -1.37
TNPO1-212ENST00000520850 KRTAP8-1Q8IUC2 63 aa6.49□□□□□ -1.37
TNPO1-212ENST00000520850 SMIM26A0A096LP01 95 aa6.45□□□□□ -1.38
TNPO1-212ENST00000520850 A0A0D9SG42 100 aa6.45□□□□□ -1.38
TNPO1-212ENST00000520850 PRR15LQ9BU68 103 aa6.45□□□□□ -1.38
TNPO1-212ENST00000520850 LINC01558Q9Y6Z2 57 aa6.45□□□□□ -1.38
TNPO1-212ENST00000520850 NEBP20929 6669 aa6.45□□□□□ -1.38
TNPO1-212ENST00000520850 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
TNPO1-212ENST00000520850 KRTAP12-1P59990 96 aa6.42□□□□□ -1.38
TNPO1-212ENST00000520850 SPINT4Q6UDR6 99 aa6.38□□□□□ -1.39
TNPO1-212ENST00000520850 MDN1Q9NU22 5596 aa6.38□□□□□ -1.39
TNPO1-212ENST00000520850 A8MU10 97 aa6.29□□□□□ -1.4
TNPO1-212ENST00000520850 SPRR2EP22531 72 aa6.29□□□□□ -1.4
TNPO1-212ENST00000520850 SPRR2BP35325 72 aa6.29□□□□□ -1.4
TNPO1-212ENST00000520850 SPRR2AP35326 72 aa6.29□□□□□ -1.4
TNPO1-212ENST00000520850 LCE1AQ5T7P2 110 aa6.28□□□□□ -1.4
TNPO1-212ENST00000520850 UQCR11O14957 56 aa6.25□□□□□ -1.41
TNPO1-212ENST00000520850 KRTAP20-1Q3LI63 56 aa6.24□□□□□ -1.41
TNPO1-212ENST00000520850 H3BS24 57 aa6.22□□□□□ -1.41
TNPO1-212ENST00000520850 V9GYY9 64 aa6.22□□□□□ -1.41
TNPO1-212ENST00000520850 KRTAP2-3P0C7H8 128 aa6.19□□□□□ -1.42
TNPO1-212ENST00000520850 KRTAP2-4Q9BYR9 128 aa6.19□□□□□ -1.42
TNPO1-212ENST00000520850 Q1T7F1 81 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms