RNA–Protein interactions for RNA: ENST00000519583.5

CLK4-203, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,462 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-203ENST00000519583 PRR15LQ9BU68 103 aa4.14□□□□□ -1.75
CLK4-203ENST00000519583 KRTAP3-3Q9BYR6 98 aa4.14□□□□□ -1.75
CLK4-203ENST00000519583 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
CLK4-203ENST00000519583 KRTAP3-1Q9BYR8 98 aa4.13□□□□□ -1.75
CLK4-203ENST00000519583 LINC01558Q9Y6Z2 57 aa4.12□□□□□ -1.75
CLK4-203ENST00000519583 Q5VV11 94 aa4.12□□□□□ -1.75
CLK4-203ENST00000519583 COX6B2Q6YFQ2 88 aa4.1□□□□□ -1.75
CLK4-203ENST00000519583 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
CLK4-203ENST00000519583 FAT4Q6V0I7 4981 aa4.07□□□□□ -1.76
CLK4-203ENST00000519583 A0A1B0GU69 56 aa4.04□□□□□ -1.76
CLK4-203ENST00000519583 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
CLK4-203ENST00000519583 A6NED7 52 aa4.03□□□□□ -1.76
CLK4-203ENST00000519583 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
CLK4-203ENST00000519583 A8MU10 97 aa4.01□□□□□ -1.77
CLK4-203ENST00000519583 KRTAP19-2Q3LHN2 52 aa4.01□□□□□ -1.77
CLK4-203ENST00000519583 LCE2AQ5TA79 106 aaPredicted RBP4.01□□□□□ -1.77
CLK4-203ENST00000519583 LCE2CQ5TA81 110 aa4□□□□□ -1.77
CLK4-203ENST00000519583 LCA10Q71F78 164 aa3.98□□□□□ -1.77
CLK4-203ENST00000519583 S4R3F8 94 aa3.97□□□□□ -1.77
CLK4-203ENST00000519583 SEC61GP60059 68 aa3.97□□□□□ -1.77
CLK4-203ENST00000519583 H1FX-AS1Q4G0G2 97 aa3.97□□□□□ -1.77
CLK4-203ENST00000519583 RBM12B-AS1Q9P1G2 102 aa3.97□□□□□ -1.77
CLK4-203ENST00000519583 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
CLK4-203ENST00000519583 MT1HP80294 61 aa3.95□□□□□ -1.78
CLK4-203ENST00000519583 M0R2T5 61 aa3.93□□□□□ -1.78
CLK4-203ENST00000519583 UQCR11O14957 56 aa3.92□□□□□ -1.78
CLK4-203ENST00000519583 SVIPQ8NHG7 77 aa3.92□□□□□ -1.78
CLK4-203ENST00000519583 MIR22HGQ0VDD5 57 aa3.9□□□□□ -1.78
CLK4-203ENST00000519583 SPATA8Q6RVD6 105 aa3.9□□□□□ -1.79
CLK4-203ENST00000519583 FLGP20930 4061 aaPredicted RBP3.9□□□□□ -1.79
CLK4-203ENST00000519583 A0A1B0GU33 70 aa3.88□□□□□ -1.79
CLK4-203ENST00000519583 KRTAP10-6P60371 365 aaPredicted RBP3.86□□□□□ -1.79
CLK4-203ENST00000519583 CSAG1Q6PB30 78 aa3.86□□□□□ -1.79
CLK4-203ENST00000519583 H0YAA0 97 aa3.86□□□□□ -1.79
CLK4-203ENST00000519583 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
CLK4-203ENST00000519583 LORP23490 312 aaPredicted RBP3.84□□□□□ -1.8
CLK4-203ENST00000519583 P0C880 135 aa3.83□□□□□ -1.8
CLK4-203ENST00000519583 ADM2Q7Z4H4 148 aa3.83□□□□□ -1.8
CLK4-203ENST00000519583 A6NN06 94 aa3.8□□□□□ -1.8
CLK4-203ENST00000519583 KRTAP9-2Q9BYQ4 174 aa3.8□□□□□ -1.8
CLK4-203ENST00000519583 KRTAP13-4Q3LI77 160 aa3.79□□□□□ -1.8
CLK4-203ENST00000519583 KRTAP9-8Q9BYQ0 159 aa3.75□□□□□ -1.81
CLK4-203ENST00000519583 A0A0D9SG42 100 aa3.75□□□□□ -1.81
CLK4-203ENST00000519583 MT2AP02795 61 aa3.72□□□□□ -1.81
CLK4-203ENST00000519583 KTN1-AS1Q86SY8 53 aa3.71□□□□□ -1.82
CLK4-203ENST00000519583 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
CLK4-203ENST00000519583 MT1FP04733 61 aa3.7□□□□□ -1.82
CLK4-203ENST00000519583 M0QZ58 72 aa3.69□□□□□ -1.82
CLK4-203ENST00000519583 K7ERS5 55 aa3.68□□□□□ -1.82
CLK4-203ENST00000519583 R4GN34 69 aa3.67□□□□□ -1.82
CLK4-203ENST00000519583 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
CLK4-203ENST00000519583 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
CLK4-203ENST00000519583 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
CLK4-203ENST00000519583 KRTAP12-1P59990 96 aa3.64□□□□□ -1.83
CLK4-203ENST00000519583 SPINT4Q6UDR6 99 aa3.63□□□□□ -1.83
CLK4-203ENST00000519583 PRAC1Q96KF2 57 aa3.63□□□□□ -1.83
CLK4-203ENST00000519583 KRTAP9-6A0A140TA67 174 aa3.63□□□□□ -1.83
CLK4-203ENST00000519583 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
CLK4-203ENST00000519583 CRCT1Q9UGL9 99 aa3.61□□□□□ -1.83
CLK4-203ENST00000519583 LCE2BO14633 110 aa3.59□□□□□ -1.83
CLK4-203ENST00000519583 ROMO1P60602 79 aa3.57□□□□□ -1.84
CLK4-203ENST00000519583 USH2AO75445 5202 aa3.56□□□□□ -1.84
CLK4-203ENST00000519583 CRIPTQ9P021 101 aa3.55□□□□□ -1.84
CLK4-203ENST00000519583 KRTAP19-1Q8IUB9 90 aa3.51□□□□□ -1.85
CLK4-203ENST00000519583 SSPOA2VEC9 5147 aa3.51□□□□□ -1.85
CLK4-203ENST00000519583 KRTAP25-1Q3LHN0 102 aa3.48□□□□□ -1.85
CLK4-203ENST00000519583 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
CLK4-203ENST00000519583 CAMK2N1Q7Z7J9 78 aa3.46□□□□□ -1.86
CLK4-203ENST00000519583 C10orf95Q9H7T3 257 aa3.44□□□□□ -1.86
CLK4-203ENST00000519583 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
CLK4-203ENST00000519583 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
CLK4-203ENST00000519583 MT1BP07438 61 aa3.42□□□□□ -1.86
CLK4-203ENST00000519583 FCGBPQ9Y6R7 5405 aaPredicted RBP3.41□□□□□ -1.86
CLK4-203ENST00000519583 PLAC4Q8WY50 150 aa3.39□□□□□ -1.87
CLK4-203ENST00000519583 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.36□□□□□ -1.87
CLK4-203ENST00000519583 KRTAP10-5P60370 271 aa3.32□□□□□ -1.88
CLK4-203ENST00000519583 LOC100996750A0A140TA64 210 aa3.31□□□□□ -1.88
CLK4-203ENST00000519583 KRTAP4-6Q9BYQ5 205 aa3.31□□□□□ -1.88
CLK4-203ENST00000519583 MACF1Q9UPN3 7388 aaKnown RBP3.3□□□□□ -1.88
CLK4-203ENST00000519583 TNP1P09430 55 aa3.29□□□□□ -1.88
CLK4-203ENST00000519583 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
CLK4-203ENST00000519583 MT1XP80297 61 aa3.25□□□□□ -1.89
CLK4-203ENST00000519583 PRO2289Q9P1D8 64 aa3.25□□□□□ -1.89
CLK4-203ENST00000519583 SYNE2Q8WXH0 6885 aaKnown RBP3.25□□□□□ -1.89
CLK4-203ENST00000519583 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
CLK4-203ENST00000519583 KRTAP23-1A1A580 65 aa3.18□□□□□ -1.9
CLK4-203ENST00000519583 KRTAP6-3Q3LI67 103 aa3.18□□□□□ -1.9
CLK4-203ENST00000519583 LCE3AQ5TA76 89 aa3.16□□□□□ -1.9
CLK4-203ENST00000519583 KRTAP10-7P60409 375 aaPredicted RBP3.14□□□□□ -1.91
CLK4-203ENST00000519583 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
CLK4-203ENST00000519583 KRTAP15-1Q3LI76 137 aa3.11□□□□□ -1.91
CLK4-203ENST00000519583 KMT2DO14686 5537 aa3.1□□□□□ -1.91
CLK4-203ENST00000519583 KRTAP8-1Q8IUC2 63 aa3.08□□□□□ -1.92
CLK4-203ENST00000519583 KRTAP4-8A0A0G2JLE6 195 aa3.07□□□□□ -1.92
CLK4-203ENST00000519583 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
CLK4-203ENST00000519583 KRTAP4-8Q9BYQ9 185 aa3.07□□□□□ -1.92
CLK4-203ENST00000519583 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
CLK4-203ENST00000519583 MUC12Q9UKN1 5478 aa3.04□□□□□ -1.92
CLK4-203ENST00000519583 NEBP20929 6669 aa3.03□□□□□ -1.92
CLK4-203ENST00000519583 H3BS24 57 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms