RNA–Protein interactions for RNA: ENST00000519480.5

MCPH1-203, Transcript of microcephalin 1, humanhuman

TSL 1 (best) BASIC

Gene MCPH1, Length 2,917 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-203ENST00000519480 KRTAP29-1A8MX34 341 aaPredicted RBP5.58□□□□□ -1.52
MCPH1-203ENST00000519480 C9orf92A6NGG3 77 aa5.58□□□□□ -1.52
MCPH1-203ENST00000519480 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
MCPH1-203ENST00000519480 K7ERS5 55 aa5.57□□□□□ -1.52
MCPH1-203ENST00000519480 RPS29P62273 56 aaKnown RBP5.57□□□□□ -1.52
MCPH1-203ENST00000519480 COA5Q86WW8 74 aa5.56□□□□□ -1.52
MCPH1-203ENST00000519480 SPANXA2-OT1Q8N9U9 137 aa5.55□□□□□ -1.52
MCPH1-203ENST00000519480 A8MUU9 505 aa5.54□□□□□ -1.52
MCPH1-203ENST00000519480 MRPL34Q9BQ48 92 aaKnown RBP5.53□□□□□ -1.52
MCPH1-203ENST00000519480 H0Y9P7 68 aa5.53□□□□□ -1.52
MCPH1-203ENST00000519480 PCLOQ9Y6V0 5065 aa5.52□□□□□ -1.53
MCPH1-203ENST00000519480 LPAP08519 4548 aa5.5□□□□□ -1.53
MCPH1-203ENST00000519480 IGLV7-46A0A075B6I9 117 aa5.47□□□□□ -1.53
MCPH1-203ENST00000519480 Q5W150 140 aa5.47□□□□□ -1.53
MCPH1-203ENST00000519480 SPATA8Q6RVD6 105 aa5.46□□□□□ -1.54
MCPH1-203ENST00000519480 HERC1Q15751 4861 aa5.44□□□□□ -1.54
MCPH1-203ENST00000519480 LRP2P98164 4655 aa5.42□□□□□ -1.54
MCPH1-203ENST00000519480 TP53AIP1Q9HCN2 124 aa5.41□□□□□ -1.54
MCPH1-203ENST00000519480 KRTAP13-3Q3SY46 172 aa5.4□□□□□ -1.55
MCPH1-203ENST00000519480 KRTAP15-1Q3LI76 137 aa5.38□□□□□ -1.55
MCPH1-203ENST00000519480 PCOTHQ58A44 107 aa5.38□□□□□ -1.55
MCPH1-203ENST00000519480 H3BPC8 53 aa5.37□□□□□ -1.55
MCPH1-203ENST00000519480 XP32Q5T750 250 aa5.37□□□□□ -1.55
MCPH1-203ENST00000519480 IGKV2D-30A0A075B6S6 120 aa5.36□□□□□ -1.55
MCPH1-203ENST00000519480 IGKV2-30P06310 120 aa5.36□□□□□ -1.55
MCPH1-203ENST00000519480 SPINT4Q6UDR6 99 aa5.34□□□□□ -1.56
MCPH1-203ENST00000519480 DMAC1Q96GE9 116 aa5.34□□□□□ -1.56
MCPH1-203ENST00000519480 UQCR11O14957 56 aa5.32□□□□□ -1.56
MCPH1-203ENST00000519480 RPL37P61927 97 aaKnown RBP5.3□□□□□ -1.56
MCPH1-203ENST00000519480 TPRXLQ17RH7 258 aa5.3□□□□□ -1.56
MCPH1-203ENST00000519480 HRES1P13985 223 aa5.27□□□□□ -1.57
MCPH1-203ENST00000519480 CAMK2N1Q7Z7J9 78 aa5.27□□□□□ -1.57
MCPH1-203ENST00000519480 A0A1B0GU69 56 aa5.26□□□□□ -1.57
MCPH1-203ENST00000519480 HMCN2Q8NDA2 5059 aa5.26□□□□□ -1.57
MCPH1-203ENST00000519480 CRIPTQ9P021 101 aa5.24□□□□□ -1.57
MCPH1-203ENST00000519480 MUC2Q02817 5179 aa5.2□□□□□ -1.58
MCPH1-203ENST00000519480 KRTAP23-1A1A580 65 aa5.18□□□□□ -1.58
MCPH1-203ENST00000519480 KRTAP4-1Q9BYQ7 146 aa5.15□□□□□ -1.59
MCPH1-203ENST00000519480 MUC17Q685J3 4493 aa5.13□□□□□ -1.59
MCPH1-203ENST00000519480 KRTAP3-1Q9BYR8 98 aa5.12□□□□□ -1.59
MCPH1-203ENST00000519480 UBR4Q5T4S7 5183 aa5.12□□□□□ -1.59
MCPH1-203ENST00000519480 RNF213Q63HN8 5207 aa5.07□□□□□ -1.6
MCPH1-203ENST00000519480 ACYP2P14621 99 aa5.07□□□□□ -1.6
MCPH1-203ENST00000519480 COX6B2Q6YFQ2 88 aa5.07□□□□□ -1.6
MCPH1-203ENST00000519480 A0A1B0GU33 70 aa5.06□□□□□ -1.6
MCPH1-203ENST00000519480 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
MCPH1-203ENST00000519480 H1FX-AS1Q4G0G2 97 aa4.95□□□□□ -1.62
MCPH1-203ENST00000519480 S4R3F8 94 aa4.94□□□□□ -1.62
MCPH1-203ENST00000519480 KRTAP19-2Q3LHN2 52 aa4.92□□□□□ -1.62
MCPH1-203ENST00000519480 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
MCPH1-203ENST00000519480 R4GN34 69 aa4.88□□□□□ -1.63
MCPH1-203ENST00000519480 H0YAA0 97 aa4.88□□□□□ -1.63
MCPH1-203ENST00000519480 PRO2289Q9P1D8 64 aa4.87□□□□□ -1.63
MCPH1-203ENST00000519480 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
MCPH1-203ENST00000519480 M0R2T5 61 aa4.76□□□□□ -1.65
MCPH1-203ENST00000519480 MT1HP80294 61 aa4.75□□□□□ -1.65
MCPH1-203ENST00000519480 KRTAP10-6P60371 365 aaPredicted RBP4.73□□□□□ -1.65
MCPH1-203ENST00000519480 KRTAP13-4Q3LI77 160 aa4.65□□□□□ -1.66
MCPH1-203ENST00000519480 PLAC4Q8WY50 150 aa4.62□□□□□ -1.67
MCPH1-203ENST00000519480 A0A0D9SG42 100 aa4.61□□□□□ -1.67
MCPH1-203ENST00000519480 M0QZ58 72 aa4.58□□□□□ -1.68
MCPH1-203ENST00000519480 KRTAP9-8Q9BYQ0 159 aa4.56□□□□□ -1.68
MCPH1-203ENST00000519480 MT2AP02795 61 aa4.56□□□□□ -1.68
MCPH1-203ENST00000519480 MT1FP04733 61 aa4.56□□□□□ -1.68
MCPH1-203ENST00000519480 KRTAP10-10P60014 251 aa4.55□□□□□ -1.68
MCPH1-203ENST00000519480 KRTAP12-2P59991 146 aa4.45□□□□□ -1.7
MCPH1-203ENST00000519480 KRTAP19-1Q8IUB9 90 aa4.44□□□□□ -1.7
MCPH1-203ENST00000519480 INE1O15225 51 aa4.44□□□□□ -1.7
MCPH1-203ENST00000519480 KRTAP12-1P59990 96 aa4.42□□□□□ -1.7
MCPH1-203ENST00000519480 KRTAP19-4Q3LI73 84 aa4.39□□□□□ -1.71
MCPH1-203ENST00000519480 SPRR2GQ9BYE4 73 aa4.39□□□□□ -1.71
MCPH1-203ENST00000519480 KRTAP9-3Q9BYQ3 159 aa4.39□□□□□ -1.71
MCPH1-203ENST00000519480 USH2AO75445 5202 aa4.35□□□□□ -1.71
MCPH1-203ENST00000519480 KRTAP9-2Q9BYQ4 174 aa4.32□□□□□ -1.72
MCPH1-203ENST00000519480 FSIP2Q5CZC0 6907 aa4.28□□□□□ -1.72
MCPH1-203ENST00000519480 MT1BP07438 61 aa4.28□□□□□ -1.72
MCPH1-203ENST00000519480 KRTAP19-8Q3LI54 63 aa4.26□□□□□ -1.73
MCPH1-203ENST00000519480 LCE4AQ5TA78 99 aa4.25□□□□□ -1.73
MCPH1-203ENST00000519480 KRTAP9-6A0A140TA67 174 aa4.21□□□□□ -1.74
MCPH1-203ENST00000519480 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.74
MCPH1-203ENST00000519480 LOC100996750A0A140TA64 210 aa4.19□□□□□ -1.74
MCPH1-203ENST00000519480 KRTAP4-6Q9BYQ5 205 aa4.19□□□□□ -1.74
MCPH1-203ENST00000519480 SSPOA2VEC9 5147 aa4.15□□□□□ -1.74
MCPH1-203ENST00000519480 MT1XP80297 61 aa4.14□□□□□ -1.75
MCPH1-203ENST00000519480 KRTAP10-5P60370 271 aa4.13□□□□□ -1.75
MCPH1-203ENST00000519480 CRCT1Q9UGL9 99 aa4.12□□□□□ -1.75
MCPH1-203ENST00000519480 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
MCPH1-203ENST00000519480 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
MCPH1-203ENST00000519480 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
MCPH1-203ENST00000519480 SPRR5A0A1B0GTR4 108 aa4.08□□□□□ -1.76
MCPH1-203ENST00000519480 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
MCPH1-203ENST00000519480 KRTAP4-8Q9BYQ9 185 aa4.06□□□□□ -1.76
MCPH1-203ENST00000519480 KRTAP19-6Q3LI70 58 aa4.05□□□□□ -1.76
MCPH1-203ENST00000519480 KMT2DO14686 5537 aa4.04□□□□□ -1.76
MCPH1-203ENST00000519480 TNP1P09430 55 aa4.03□□□□□ -1.76
MCPH1-203ENST00000519480 KRTAP10-7P60409 375 aaPredicted RBP4.02□□□□□ -1.77
MCPH1-203ENST00000519480 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
MCPH1-203ENST00000519480 FCGBPQ9Y6R7 5405 aaPredicted RBP3.96□□□□□ -1.77
MCPH1-203ENST00000519480 LCE3AQ5TA76 89 aa3.93□□□□□ -1.78
MCPH1-203ENST00000519480 LCE3BQ5TA77 95 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms