RNA–Protein interactions for RNA: ENST00000518885.1

CNOT7-204, Transcript of CCR4-NOT transcription complex subunit 7, human

TSL 3

Gene CNOT7, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNOT7-204	ENST00000518885	KRTAP3-3	Q9BYR6	98 aa		10.98	□□□□□ -0.65
CNOT7-204	ENST00000518885	LINC00208	Q96KT6	92 aa		10.97	□□□□□ -0.65
CNOT7-204	ENST00000518885	MACF1	Q9UPN3	7388 aa	Known RBP	10.96	□□□□□ -0.65
CNOT7-204	ENST00000518885	NDUFC1	O43677	76 aa		10.96	□□□□□ -0.65
CNOT7-204	ENST00000518885	KLKP1	Q107X0	134 aa		10.96	□□□□□ -0.65
CNOT7-204	ENST00000518885		Q5VV11	94 aa		10.92	□□□□□ -0.66
CNOT7-204	ENST00000518885	SPRR2G	Q9BYE4	73 aa		10.92	□□□□□ -0.66
CNOT7-204	ENST00000518885	OCR1	Q9BZK8	76 aa		10.92	□□□□□ -0.66
CNOT7-204	ENST00000518885	IMUP	Q9GZP8	106 aa		10.92	□□□□□ -0.66
CNOT7-204	ENST00000518885	CRIPT	Q9P021	101 aa		10.9	□□□□□ -0.66
CNOT7-204	ENST00000518885		H3BPC8	53 aa		10.85	□□□□□ -0.67
CNOT7-204	ENST00000518885	SCGB1A1	P11684	91 aa		10.84	□□□□□ -0.67
CNOT7-204	ENST00000518885	KRTAP19-8	Q3LI54	63 aa		10.82	□□□□□ -0.68
CNOT7-204	ENST00000518885	SYNE2	Q8WXH0	6885 aa	Known RBP	10.82	□□□□□ -0.68
CNOT7-204	ENST00000518885		H0YAA0	97 aa		10.81	□□□□□ -0.68
CNOT7-204	ENST00000518885	MT1B	P07438	61 aa		10.76	□□□□□ -0.69
CNOT7-204	ENST00000518885		A6NN06	94 aa		10.75	□□□□□ -0.69
CNOT7-204	ENST00000518885	ADM2	Q7Z4H4	148 aa		10.65	□□□□□ -0.7
CNOT7-204	ENST00000518885		K7ERU9	68 aa		10.63	□□□□□ -0.71
CNOT7-204	ENST00000518885	DMAC1	Q96GE9	116 aa		10.61	□□□□□ -0.71
CNOT7-204	ENST00000518885	KRTAP6-3	Q3LI67	103 aa		10.59	□□□□□ -0.71
CNOT7-204	ENST00000518885	SMIM20	Q8N5G0	67 aa		10.59	□□□□□ -0.71
CNOT7-204	ENST00000518885	KRTAP10-5	P60370	271 aa		10.57	□□□□□ -0.72
CNOT7-204	ENST00000518885	C20orf197	Q8N268	126 aa		10.57	□□□□□ -0.72
CNOT7-204	ENST00000518885	TRAV7	A0A075B6U4	112 aa		10.49	□□□□□ -0.73
CNOT7-204	ENST00000518885	MT-ATP8	P03928	68 aa		10.49	□□□□□ -0.73
CNOT7-204	ENST00000518885		R4GN34	69 aa		10.46	□□□□□ -0.73
CNOT7-204	ENST00000518885	ACYP2	P14621	99 aa		10.43	□□□□□ -0.74
CNOT7-204	ENST00000518885	SPTSSB	Q8NFR3	76 aa		10.39	□□□□□ -0.75
CNOT7-204	ENST00000518885	PLAC4	Q8WY50	150 aa		10.38	□□□□□ -0.75
CNOT7-204	ENST00000518885	PRO2289	Q9P1D8	64 aa		10.37	□□□□□ -0.75
CNOT7-204	ENST00000518885		P0C880	135 aa		10.34	□□□□□ -0.75
CNOT7-204	ENST00000518885		M0QZ58	72 aa		10.32	□□□□□ -0.76
CNOT7-204	ENST00000518885	CHKB-CPT1B	H3BT56	60 aa		10.27	□□□□□ -0.77
CNOT7-204	ENST00000518885	KRTAP3-2	Q9BYR7	98 aa		10.23	□□□□□ -0.77
CNOT7-204	ENST00000518885	SNURF	Q9Y675	71 aa		10.2	□□□□□ -0.78
CNOT7-204	ENST00000518885	LINC01554	Q52M75	96 aa		10.16	□□□□□ -0.78
CNOT7-204	ENST00000518885	SPANXA2-OT1	Q8N9U9	137 aa		10.16	□□□□□ -0.78
CNOT7-204	ENST00000518885	NEB	P20929	6669 aa		10.15	□□□□□ -0.78
CNOT7-204	ENST00000518885	SERP2	Q8N6R1	65 aa		10.14	□□□□□ -0.79
CNOT7-204	ENST00000518885	MT1X	P80297	61 aa		10.12	□□□□□ -0.79
CNOT7-204	ENST00000518885	MUC12	Q9UKN1	5478 aa		10.12	□□□□□ -0.79
CNOT7-204	ENST00000518885	KRTAP5-9	P26371	169 aa		10.11	□□□□□ -0.79
CNOT7-204	ENST00000518885	KMT2D	O14686	5537 aa		9.97	□□□□□ -0.81
CNOT7-204	ENST00000518885	KRTAP12-2	P59991	146 aa		9.96	□□□□□ -0.82
CNOT7-204	ENST00000518885	MDN1	Q9NU22	5596 aa		9.93	□□□□□ -0.82
CNOT7-204	ENST00000518885	KRTAP8-1	Q8IUC2	63 aa		9.87	□□□□□ -0.83
CNOT7-204	ENST00000518885	SPRR2F	Q96RM1	72 aa		9.85	□□□□□ -0.83
CNOT7-204	ENST00000518885	COX7C	P15954	63 aa		9.83	□□□□□ -0.84
CNOT7-204	ENST00000518885	COA5	Q86WW8	74 aa		9.82	□□□□□ -0.84
CNOT7-204	ENST00000518885	SEC61G	P60059	68 aa		9.79	□□□□□ -0.84
CNOT7-204	ENST00000518885	KRTAP20-1	Q3LI63	56 aa		9.79	□□□□□ -0.84
CNOT7-204	ENST00000518885	SERP1	Q9Y6X1	66 aa		9.73	□□□□□ -0.85
CNOT7-204	ENST00000518885	SPRR2E	P22531	72 aa		9.7	□□□□□ -0.86
CNOT7-204	ENST00000518885	SPRR2B	P35325	72 aa		9.7	□□□□□ -0.86
CNOT7-204	ENST00000518885	SPRR2A	P35326	72 aa		9.7	□□□□□ -0.86
CNOT7-204	ENST00000518885	KRTAP10-12	P60413	245 aa		9.65	□□□□□ -0.86
CNOT7-204	ENST00000518885	KRTAP10-7	P60409	375 aa	Predicted RBP	9.64	□□□□□ -0.87
CNOT7-204	ENST00000518885	KRTAP13-4	Q3LI77	160 aa		9.64	□□□□□ -0.87
CNOT7-204	ENST00000518885	CAMK2N1	Q7Z7J9	78 aa		9.64	□□□□□ -0.87
CNOT7-204	ENST00000518885		H7BZZ5	65 aa		9.63	□□□□□ -0.87
CNOT7-204	ENST00000518885	KRTAP4-8	A0A0G2JLE6	195 aa		9.61	□□□□□ -0.87
CNOT7-204	ENST00000518885	KRTAP4-8	Q9BYQ9	185 aa		9.61	□□□□□ -0.87
CNOT7-204	ENST00000518885	KRTAP2-3	P0C7H8	128 aa		9.57	□□□□□ -0.88
CNOT7-204	ENST00000518885	KRTAP2-4	Q9BYR9	128 aa		9.57	□□□□□ -0.88
CNOT7-204	ENST00000518885	ANAPC13	Q9BS18	74 aa		9.53	□□□□□ -0.88
CNOT7-204	ENST00000518885	LCE1A	Q5T7P2	110 aa		9.52	□□□□□ -0.89
CNOT7-204	ENST00000518885	CYSTM1	Q9H1C7	97 aa		9.51	□□□□□ -0.89
CNOT7-204	ENST00000518885		A0A1B0GU33	70 aa		9.5	□□□□□ -0.89
CNOT7-204	ENST00000518885		A0A0D9SG42	100 aa		9.46	□□□□□ -0.9
CNOT7-204	ENST00000518885	SPATA8	Q6RVD6	105 aa		9.41	□□□□□ -0.9
CNOT7-204	ENST00000518885		A0A1B0GU69	56 aa		9.39	□□□□□ -0.91
CNOT7-204	ENST00000518885	SPRR2D	P22532	72 aa		9.39	□□□□□ -0.91
CNOT7-204	ENST00000518885	SPINT4	Q6UDR6	99 aa		9.36	□□□□□ -0.91
CNOT7-204	ENST00000518885	SMIM26	A0A096LP01	95 aa		9.31	□□□□□ -0.92
CNOT7-204	ENST00000518885	ATP5E	P56381	51 aa	Predicted RBP	9.3	□□□□□ -0.92
CNOT7-204	ENST00000518885	KRTAP2-2	Q9BYT5	123 aa		9.27	□□□□□ -0.93
CNOT7-204	ENST00000518885	KRTAP2-1	Q9BYU5	128 aa		9.27	□□□□□ -0.93
CNOT7-204	ENST00000518885	CCDC179	H3BU77	68 aa		9.23	□□□□□ -0.93
CNOT7-204	ENST00000518885	KRTAP12-1	P59990	96 aa		9.23	□□□□□ -0.93
CNOT7-204	ENST00000518885	PRR15L	Q9BU68	103 aa		9.21	□□□□□ -0.94
CNOT7-204	ENST00000518885	LCE3B	Q5TA77	95 aa		9.11	□□□□□ -0.95
CNOT7-204	ENST00000518885		A8MU10	97 aa		9.05	□□□□□ -0.96
CNOT7-204	ENST00000518885	KRTAP19-7	Q3SYF9	63 aa		9.03	□□□□□ -0.96
CNOT7-204	ENST00000518885	TMEM258	P61165	79 aa		9.02	□□□□□ -0.97
CNOT7-204	ENST00000518885	MT1E	P04732	61 aa		8.99	□□□□□ -0.97
CNOT7-204	ENST00000518885	LINC01558	Q9Y6Z2	57 aa		8.99	□□□□□ -0.97
CNOT7-204	ENST00000518885	KRTAP19-3	Q7Z4W3	81 aa		8.93	□□□□□ -0.98
CNOT7-204	ENST00000518885	LCE5A	Q5TCM9	118 aa		8.92	□□□□□ -0.98
CNOT7-204	ENST00000518885	TNP1	P09430	55 aa		8.9	□□□□□ -0.98
CNOT7-204	ENST00000518885	KRTAP19-5	Q3LI72	72 aa		8.85	□□□□□ -0.99
CNOT7-204	ENST00000518885	UQCR11	O14957	56 aa		8.84	□□□□□ -0.99
CNOT7-204	ENST00000518885	C10orf95	Q9H7T3	257 aa		8.79	□□□□□ -1
CNOT7-204	ENST00000518885	PP632	Q6XCG6	107 aa		8.78	□□□□□ -1
CNOT7-204	ENST00000518885	MT1G	P13640	62 aa		8.76	□□□□□ -1.01
CNOT7-204	ENST00000518885	DST	Q03001	7570 aa	Known RBP	8.75	□□□□□ -1.01
CNOT7-204	ENST00000518885	LCE3A	Q5TA76	89 aa		8.69	□□□□□ -1.02
CNOT7-204	ENST00000518885		V9GYY9	64 aa		8.62	□□□□□ -1.03
CNOT7-204	ENST00000518885	MIR22HG	Q0VDD5	57 aa		8.61	□□□□□ -1.03
CNOT7-204	ENST00000518885	MT1L	Q93083	61 aa		8.59	□□□□□ -1.03

Retrieved 100 of 20,778 RNA–protein pairs in 129.2 ms