RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 ATOX1O00244 68 aa6.02□□□□□ -1.45
VEGFA-219ENST00000518824 MT1BP07438 61 aa5.99□□□□□ -1.45
VEGFA-219ENST00000518824 J3QR89 54 aa5.97□□□□□ -1.45
VEGFA-219ENST00000518824 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
VEGFA-219ENST00000518824 PCP4P48539 62 aa5.95□□□□□ -1.46
VEGFA-219ENST00000518824 KRTAP19-8Q3LI54 63 aa5.94□□□□□ -1.46
VEGFA-219ENST00000518824 MP68P56378 58 aa5.93□□□□□ -1.46
VEGFA-219ENST00000518824 NDUFC1O43677 76 aa5.9□□□□□ -1.46
VEGFA-219ENST00000518824 MT-ATP8P03928 68 aa5.9□□□□□ -1.46
VEGFA-219ENST00000518824 A8MUN3 132 aa5.89□□□□□ -1.47
VEGFA-219ENST00000518824 Q5VV11 94 aa5.89□□□□□ -1.47
VEGFA-219ENST00000518824 SCGB1A1P11684 91 aa5.87□□□□□ -1.47
VEGFA-219ENST00000518824 IMUPQ9GZP8 106 aa5.86□□□□□ -1.47
VEGFA-219ENST00000518824 H3BPC8 53 aa5.85□□□□□ -1.47
VEGFA-219ENST00000518824 H0YAA0 97 aa5.84□□□□□ -1.47
VEGFA-219ENST00000518824 ADM2Q7Z4H4 148 aa5.84□□□□□ -1.47
VEGFA-219ENST00000518824 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
VEGFA-219ENST00000518824 A6NN06 94 aa5.81□□□□□ -1.48
VEGFA-219ENST00000518824 K7ERU9 68 aa5.81□□□□□ -1.48
VEGFA-219ENST00000518824 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
VEGFA-219ENST00000518824 CRIPTQ9P021 101 aa5.8□□□□□ -1.48
VEGFA-219ENST00000518824 KRTAP10-5P60370 271 aa5.79□□□□□ -1.48
VEGFA-219ENST00000518824 SYNE2Q8WXH0 6885 aaKnown RBP5.78□□□□□ -1.48
VEGFA-219ENST00000518824 P0C880 135 aa5.76□□□□□ -1.49
VEGFA-219ENST00000518824 TRAV7A0A075B6U4 112 aa5.75□□□□□ -1.49
VEGFA-219ENST00000518824 KRTAP6-3Q3LI67 103 aa5.73□□□□□ -1.49
VEGFA-219ENST00000518824 KRTAP3-2Q9BYR7 98 aa5.73□□□□□ -1.49
VEGFA-219ENST00000518824 SNURFQ9Y675 71 aa5.7□□□□□ -1.5
VEGFA-219ENST00000518824 SMIM20Q8N5G0 67 aa5.69□□□□□ -1.5
VEGFA-219ENST00000518824 ACYP2P14621 99 aa5.64□□□□□ -1.51
VEGFA-219ENST00000518824 M0QZ58 72 aa5.62□□□□□ -1.51
VEGFA-219ENST00000518824 MT1XP80297 61 aa5.62□□□□□ -1.51
VEGFA-219ENST00000518824 R4GN34 69 aa5.62□□□□□ -1.51
VEGFA-219ENST00000518824 C20orf197Q8N268 126 aa5.6□□□□□ -1.51
VEGFA-219ENST00000518824 SERP2Q8N6R1 65 aa5.58□□□□□ -1.52
VEGFA-219ENST00000518824 PLAC4Q8WY50 150 aa5.56□□□□□ -1.52
VEGFA-219ENST00000518824 LINC01554Q52M75 96 aa5.55□□□□□ -1.52
VEGFA-219ENST00000518824 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
VEGFA-219ENST00000518824 SPANXA2-OT1Q8N9U9 137 aa5.52□□□□□ -1.53
VEGFA-219ENST00000518824 KRTAP5-9P26371 169 aa5.5□□□□□ -1.53
VEGFA-219ENST00000518824 SPTSSBQ8NFR3 76 aa5.5□□□□□ -1.53
VEGFA-219ENST00000518824 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
VEGFA-219ENST00000518824 CYSTM1Q9H1C7 97 aa5.46□□□□□ -1.54
VEGFA-219ENST00000518824 KMT2DO14686 5537 aa5.44□□□□□ -1.54
VEGFA-219ENST00000518824 KRTAP13-4Q3LI77 160 aa5.44□□□□□ -1.54
VEGFA-219ENST00000518824 MUC12Q9UKN1 5478 aa5.43□□□□□ -1.54
VEGFA-219ENST00000518824 COX7CP15954 63 aa5.43□□□□□ -1.54
VEGFA-219ENST00000518824 COA5Q86WW8 74 aa5.42□□□□□ -1.54
VEGFA-219ENST00000518824 KRTAP4-8A0A0G2JLE6 195 aa5.4□□□□□ -1.54
VEGFA-219ENST00000518824 KRTAP12-2P59991 146 aa5.4□□□□□ -1.54
VEGFA-219ENST00000518824 KRTAP4-8Q9BYQ9 185 aa5.4□□□□□ -1.54
VEGFA-219ENST00000518824 NEBP20929 6669 aa5.4□□□□□ -1.55
VEGFA-219ENST00000518824 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
VEGFA-219ENST00000518824 H7BZZ5 65 aa5.37□□□□□ -1.55
VEGFA-219ENST00000518824 SPRR2FQ96RM1 72 aa5.37□□□□□ -1.55
VEGFA-219ENST00000518824 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
VEGFA-219ENST00000518824 LOC100996750A0A140TA64 210 aa5.3□□□□□ -1.56
VEGFA-219ENST00000518824 KRTAP10-12P60413 245 aa5.3□□□□□ -1.56
VEGFA-219ENST00000518824 KRTAP4-6Q9BYQ5 205 aa5.3□□□□□ -1.56
VEGFA-219ENST00000518824 MDN1Q9NU22 5596 aa5.29□□□□□ -1.56
VEGFA-219ENST00000518824 SPRR2EP22531 72 aa5.27□□□□□ -1.57
VEGFA-219ENST00000518824 SPRR2BP35325 72 aa5.27□□□□□ -1.57
VEGFA-219ENST00000518824 SPRR2AP35326 72 aa5.27□□□□□ -1.57
VEGFA-219ENST00000518824 KRTAP20-1Q3LI63 56 aa5.27□□□□□ -1.57
VEGFA-219ENST00000518824 ANAPC13Q9BS18 74 aa5.25□□□□□ -1.57
VEGFA-219ENST00000518824 SPATA8Q6RVD6 105 aa5.24□□□□□ -1.57
VEGFA-219ENST00000518824 CCDC179H3BU77 68 aa5.23□□□□□ -1.57
VEGFA-219ENST00000518824 LCE1AQ5T7P2 110 aa5.23□□□□□ -1.57
VEGFA-219ENST00000518824 A0A0D9SG42 100 aa5.22□□□□□ -1.57
VEGFA-219ENST00000518824 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
VEGFA-219ENST00000518824 SEC61GP60059 68 aa5.19□□□□□ -1.58
VEGFA-219ENST00000518824 A0A1B0GU33 70 aa5.18□□□□□ -1.58
VEGFA-219ENST00000518824 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
VEGFA-219ENST00000518824 KRTAP2-3P0C7H8 128 aa5.14□□□□□ -1.59
VEGFA-219ENST00000518824 KRTAP2-4Q9BYR9 128 aa5.14□□□□□ -1.59
VEGFA-219ENST00000518824 KRTAP12-1P59990 96 aa5.13□□□□□ -1.59
VEGFA-219ENST00000518824 SPINT4Q6UDR6 99 aa5.11□□□□□ -1.59
VEGFA-219ENST00000518824 A0A1B0GU69 56 aa5.09□□□□□ -1.59
VEGFA-219ENST00000518824 A8MU10 97 aa5.08□□□□□ -1.6
VEGFA-219ENST00000518824 SPRR2DP22532 72 aa5.08□□□□□ -1.6
VEGFA-219ENST00000518824 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
VEGFA-219ENST00000518824 ATP5EP56381 51 aaPredicted RBP5.01□□□□□ -1.61
VEGFA-219ENST00000518824 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
VEGFA-219ENST00000518824 V9GYY9 64 aa5□□□□□ -1.61
VEGFA-219ENST00000518824 SMIM26A0A096LP01 95 aa4.98□□□□□ -1.61
VEGFA-219ENST00000518824 KRTAP2-2Q9BYT5 123 aa4.98□□□□□ -1.61
VEGFA-219ENST00000518824 KRTAP2-1Q9BYU5 128 aa4.98□□□□□ -1.61
VEGFA-219ENST00000518824 MT1EP04732 61 aa4.96□□□□□ -1.62
VEGFA-219ENST00000518824 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
VEGFA-219ENST00000518824 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
VEGFA-219ENST00000518824 PRO0628Q9UI54 55 aa4.94□□□□□ -1.62
VEGFA-219ENST00000518824 TMEM258P61165 79 aa4.93□□□□□ -1.62
VEGFA-219ENST00000518824 C10orf95Q9H7T3 257 aa4.92□□□□□ -1.62
VEGFA-219ENST00000518824 KRTAP19-5Q3LI72 72 aa4.91□□□□□ -1.62
VEGFA-219ENST00000518824 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.63
VEGFA-219ENST00000518824 PRR15LQ9BU68 103 aa4.89□□□□□ -1.63
VEGFA-219ENST00000518824 KRTAP19-3Q7Z4W3 81 aa4.88□□□□□ -1.63
VEGFA-219ENST00000518824 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
VEGFA-219ENST00000518824 TNP1P09430 55 aa4.79□□□□□ -1.64
VEGFA-219ENST00000518824 UQCR11O14957 56 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms