RNA–Protein interactions for RNA: ENST00000516969.1

SCARNA20.4-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.4-201ENST00000516969 PRR15LQ9BU68 103 aa2.72□□□□□ -1.97
SCARNA20.4-201ENST00000516969 KRTAP3-3Q9BYR6 98 aa2.72□□□□□ -1.97
SCARNA20.4-201ENST00000516969 HERC1Q15751 4861 aa2.71□□□□□ -1.98
SCARNA20.4-201ENST00000516969 RBM12B-AS1Q9P1G2 102 aa2.71□□□□□ -1.98
SCARNA20.4-201ENST00000516969 LCA10Q71F78 164 aa2.7□□□□□ -1.98
SCARNA20.4-201ENST00000516969 KRTAP19-2Q3LHN2 52 aa2.69□□□□□ -1.98
SCARNA20.4-201ENST00000516969 S4R3F8 94 aa2.69□□□□□ -1.98
SCARNA20.4-201ENST00000516969 A0A1B0GU69 56 aa2.68□□□□□ -1.98
SCARNA20.4-201ENST00000516969 FLGP20930 4061 aaPredicted RBP2.68□□□□□ -1.98
SCARNA20.4-201ENST00000516969 HMCN2Q8NDA2 5059 aa2.67□□□□□ -1.98
SCARNA20.4-201ENST00000516969 SEC61GP60059 68 aa2.65□□□□□ -1.99
SCARNA20.4-201ENST00000516969 A6NED7 52 aa2.64□□□□□ -1.99
SCARNA20.4-201ENST00000516969 CSAG1Q6PB30 78 aa2.64□□□□□ -1.99
SCARNA20.4-201ENST00000516969 BRK1Q8WUW1 75 aa2.64□□□□□ -1.99
SCARNA20.4-201ENST00000516969 KRTAP3-2Q9BYR7 98 aa2.64□□□□□ -1.99
SCARNA20.4-201ENST00000516969 KRTAP10-6P60371 365 aaPredicted RBP2.63□□□□□ -1.99
SCARNA20.4-201ENST00000516969 CDC42SE1Q9NRR8 79 aa2.63□□□□□ -1.99
SCARNA20.4-201ENST00000516969 PRO0628Q9UI54 55 aa2.63□□□□□ -1.99
SCARNA20.4-201ENST00000516969 A8MU10 97 aa2.62□□□□□ -1.99
SCARNA20.4-201ENST00000516969 UQCR11O14957 56 aa2.62□□□□□ -1.99
SCARNA20.4-201ENST00000516969 SPATA8Q6RVD6 105 aa2.62□□□□□ -1.99
SCARNA20.4-201ENST00000516969 MUC2Q02817 5179 aa2.61□□□□□ -1.99
SCARNA20.4-201ENST00000516969 A0A1B0GU33 70 aa2.61□□□□□ -1.99
SCARNA20.4-201ENST00000516969 H0YAA0 97 aa2.61□□□□□ -1.99
SCARNA20.4-201ENST00000516969 LCE2CQ5TA81 110 aa2.6□□□□□ -1.99
SCARNA20.4-201ENST00000516969 P0C880 135 aa2.59□□□□□ -1.99
SCARNA20.4-201ENST00000516969 MIR22HGQ0VDD5 57 aa2.59□□□□□ -1.99
SCARNA20.4-201ENST00000516969 ADM2Q7Z4H4 148 aa2.58□□□□□ -2
SCARNA20.4-201ENST00000516969 KRTAP13-4Q3LI77 160 aa2.55□□□□□ -2
SCARNA20.4-201ENST00000516969 RNF213Q63HN8 5207 aa2.53□□□□□ -2
SCARNA20.4-201ENST00000516969 M0QZ58 72 aa2.53□□□□□ -2
SCARNA20.4-201ENST00000516969 UBR4Q5T4S7 5183 aa2.52□□□□□ -2.01
SCARNA20.4-201ENST00000516969 MT1HP80294 61 aa2.52□□□□□ -2.01
SCARNA20.4-201ENST00000516969 A6NN06 94 aa2.51□□□□□ -2.01
SCARNA20.4-201ENST00000516969 LORP23490 312 aaPredicted RBP2.51□□□□□ -2.01
SCARNA20.4-201ENST00000516969 PMAIP1Q13794 54 aa2.51□□□□□ -2.01
SCARNA20.4-201ENST00000516969 FAT4Q6V0I7 4981 aa2.48□□□□□ -2.01
SCARNA20.4-201ENST00000516969 A0A0D9SG42 100 aa2.47□□□□□ -2.01
SCARNA20.4-201ENST00000516969 CRIPTQ9P021 101 aa2.47□□□□□ -2.01
SCARNA20.4-201ENST00000516969 R4GN34 69 aa2.47□□□□□ -2.01
SCARNA20.4-201ENST00000516969 M0R2T5 61 aa2.46□□□□□ -2.02
SCARNA20.4-201ENST00000516969 KRTAP12-1P59990 96 aa2.46□□□□□ -2.02
SCARNA20.4-201ENST00000516969 KRTAP9-8Q9BYQ0 159 aa2.46□□□□□ -2.02
SCARNA20.4-201ENST00000516969 H3BS24 57 aa2.45□□□□□ -2.02
SCARNA20.4-201ENST00000516969 KRTAP12-2P59991 146 aa2.45□□□□□ -2.02
SCARNA20.4-201ENST00000516969 K7ERS5 55 aa2.44□□□□□ -2.02
SCARNA20.4-201ENST00000516969 MT2AP02795 61 aa2.43□□□□□ -2.02
SCARNA20.4-201ENST00000516969 A0A0A0MQY5 61 aa2.42□□□□□ -2.02
SCARNA20.4-201ENST00000516969 MT1FP04733 61 aa2.42□□□□□ -2.02
SCARNA20.4-201ENST00000516969 KTN1-AS1Q86SY8 53 aa2.42□□□□□ -2.02
SCARNA20.4-201ENST00000516969 SPRR2GQ9BYE4 73 aa2.42□□□□□ -2.02
SCARNA20.4-201ENST00000516969 LINC01554Q52M75 96 aa2.41□□□□□ -2.02
SCARNA20.4-201ENST00000516969 LCE2AQ5TA79 106 aaPredicted RBP2.41□□□□□ -2.02
SCARNA20.4-201ENST00000516969 KRTAP19-1Q8IUB9 90 aa2.41□□□□□ -2.02
SCARNA20.4-201ENST00000516969 KRTAP10-10P60014 251 aa2.4□□□□□ -2.03
SCARNA20.4-201ENST00000516969 SPINT4Q6UDR6 99 aa2.4□□□□□ -2.03
SCARNA20.4-201ENST00000516969 ROMO1P60602 79 aa2.38□□□□□ -2.03
SCARNA20.4-201ENST00000516969 KRTAP9-3Q9BYQ3 159 aa2.37□□□□□ -2.03
SCARNA20.4-201ENST00000516969 KRTAP19-8Q3LI54 63 aa2.36□□□□□ -2.03
SCARNA20.4-201ENST00000516969 PRAC1Q96KF2 57 aa2.34□□□□□ -2.03
SCARNA20.4-201ENST00000516969 C10orf95Q9H7T3 257 aa2.33□□□□□ -2.04
SCARNA20.4-201ENST00000516969 MT1BP07438 61 aa2.31□□□□□ -2.04
SCARNA20.4-201ENST00000516969 CAMK2N1Q7Z7J9 78 aa2.31□□□□□ -2.04
SCARNA20.4-201ENST00000516969 PLAC4Q8WY50 150 aa2.31□□□□□ -2.04
SCARNA20.4-201ENST00000516969 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
SCARNA20.4-201ENST00000516969 LCE2BO14633 110 aa2.29□□□□□ -2.04
SCARNA20.4-201ENST00000516969 MT1XP80297 61 aa2.25□□□□□ -2.05
SCARNA20.4-201ENST00000516969 KRTAP10-5P60370 271 aa2.24□□□□□ -2.05
SCARNA20.4-201ENST00000516969 TNP1P09430 55 aa2.23□□□□□ -2.05
SCARNA20.4-201ENST00000516969 KRTAP23-1A1A580 65 aa2.22□□□□□ -2.05
SCARNA20.4-201ENST00000516969 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
SCARNA20.4-201ENST00000516969 PRO2289Q9P1D8 64 aa2.19□□□□□ -2.06
SCARNA20.4-201ENST00000516969 LCE2DQ5TA82 110 aaPredicted RBP2.18□□□□□ -2.06
SCARNA20.4-201ENST00000516969 USH2AO75445 5202 aa2.16□□□□□ -2.06
SCARNA20.4-201ENST00000516969 KRTAP10-7P60409 375 aaPredicted RBP2.15□□□□□ -2.07
SCARNA20.4-201ENST00000516969 KRTAP10-12P60413 245 aa2.13□□□□□ -2.07
SCARNA20.4-201ENST00000516969 KRTAP19-6Q3LI70 58 aa2.13□□□□□ -2.07
SCARNA20.4-201ENST00000516969 LCE3AQ5TA76 89 aa2.13□□□□□ -2.07
SCARNA20.4-201ENST00000516969 KRTAP8-1Q8IUC2 63 aa2.11□□□□□ -2.07
SCARNA20.4-201ENST00000516969 SSPOA2VEC9 5147 aa2.11□□□□□ -2.07
SCARNA20.4-201ENST00000516969 KRTAP15-1Q3LI76 137 aa2.06□□□□□ -2.08
SCARNA20.4-201ENST00000516969 KRTAP4-8A0A0G2JLE6 195 aa2.05□□□□□ -2.08
SCARNA20.4-201ENST00000516969 KRTAP12-3P60328 96 aa2.05□□□□□ -2.08
SCARNA20.4-201ENST00000516969 KRTAP4-8Q9BYQ9 185 aa2.05□□□□□ -2.08
SCARNA20.4-201ENST00000516969 KRTAP9-2Q9BYQ4 174 aa2.04□□□□□ -2.08
SCARNA20.4-201ENST00000516969 KRTAP19-5Q3LI72 72 aa2.03□□□□□ -2.08
SCARNA20.4-201ENST00000516969 KMT2DO14686 5537 aa2.03□□□□□ -2.09
SCARNA20.4-201ENST00000516969 FCGBPQ9Y6R7 5405 aaPredicted RBP2.02□□□□□ -2.09
SCARNA20.4-201ENST00000516969 KRTAP19-7Q3SYF9 63 aa2.01□□□□□ -2.09
SCARNA20.4-201ENST00000516969 FSIP2Q5CZC0 6907 aa2□□□□□ -2.09
SCARNA20.4-201ENST00000516969 SPRR5A0A1B0GTR4 108 aa1.99□□□□□ -2.09
SCARNA20.4-201ENST00000516969 CRCT1Q9UGL9 99 aa1.98□□□□□ -2.09
SCARNA20.4-201ENST00000516969 LUZP6Q538Z0 58 aa1.97□□□□□ -2.09
SCARNA20.4-201ENST00000516969 MT1EP04732 61 aa1.96□□□□□ -2.1
SCARNA20.4-201ENST00000516969 KRTAP19-4Q3LI73 84 aa1.95□□□□□ -2.1
SCARNA20.4-201ENST00000516969 LCE3CQ5T5A8 94 aa1.93□□□□□ -2.1
SCARNA20.4-201ENST00000516969 MT1LQ93083 61 aa1.93□□□□□ -2.1
SCARNA20.4-201ENST00000516969 NDUFAF8A1L188 74 aa1.88□□□□□ -2.11
SCARNA20.4-201ENST00000516969 MT1GP13640 62 aa1.87□□□□□ -2.11
SCARNA20.4-201ENST00000516969 KRTAP5-9P26371 169 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms