RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 SNAPC5O75971 98 aa-5.5□□□□□ -3.29
RNU6-542P-201ENST00000516405 MROH1Q8NDA8 1641 aa-5.5□□□□□ -3.29
RNU6-542P-201ENST00000516405 EIF2AK4Q9P2K8 1649 aaKnown RBP-5.5□□□□□ -3.29
RNU6-542P-201ENST00000516405 PTMSP20962 102 aa-5.51□□□□□ -3.29
RNU6-542P-201ENST00000516405 LMO7Q8WWI1 1683 aa-5.51□□□□□ -3.29
RNU6-542P-201ENST00000516405 CCDC180Q9P1Z9 1646 aa-5.52□□□□□ -3.29
RNU6-542P-201ENST00000516405 ETDCA0A1B0GVM5 59 aa-5.52□□□□□ -3.29
RNU6-542P-201ENST00000516405 DIP2AQ14689 1571 aa-5.52□□□□□ -3.29
RNU6-542P-201ENST00000516405 RALGAPBQ86X10 1494 aa-5.52□□□□□ -3.29
RNU6-542P-201ENST00000516405 RRBP1Q9P2E9 1410 aaKnown RBP-5.53□□□□□ -3.29
RNU6-542P-201ENST00000516405 MYMXA0A1B0GTQ4 84 aa-5.53□□□□□ -3.29
RNU6-542P-201ENST00000516405 COL5A1-AS1Q5SY13 56 aa-5.54□□□□□ -3.3
RNU6-542P-201ENST00000516405 GLI2P10070 1586 aa-5.55□□□□□ -3.3
RNU6-542P-201ENST00000516405 RBP2P50120 134 aa-5.56□□□□□ -3.3
RNU6-542P-201ENST00000516405 FAUP35544 74 aaKnown RBP-5.57□□□□□ -3.3
RNU6-542P-201ENST00000516405 CEBPZOSA8MTT3 80 aa-5.59□□□□□ -3.3
RNU6-542P-201ENST00000516405 HMGA1P17096 107 aaKnown RBP-5.59□□□□□ -3.3
RNU6-542P-201ENST00000516405 PEA15Q15121 130 aa-5.59□□□□□ -3.3
RNU6-542P-201ENST00000516405 ABCC6O95255 1503 aa-5.59□□□□□ -3.3
RNU6-542P-201ENST00000516405 PPP3R1P63098 170 aa-5.61□□□□□ -3.31
RNU6-542P-201ENST00000516405 RABAC1Q9UI14 185 aa-5.61□□□□□ -3.31
RNU6-542P-201ENST00000516405 UTRNP46939 3433 aa-5.61□□□□□ -3.31
RNU6-542P-201ENST00000516405 SMIM11AP58511 58 aa-5.62□□□□□ -3.31
RNU6-542P-201ENST00000516405 TIAM1Q13009 1591 aa-5.63□□□□□ -3.31
RNU6-542P-201ENST00000516405 WFDC10BQ8IUB3 73 aa-5.63□□□□□ -3.31
RNU6-542P-201ENST00000516405 SMIM27A0A1W2PRY6 76 aa-5.64□□□□□ -3.31
RNU6-542P-201ENST00000516405 S100A1P23297 94 aa-5.65□□□□□ -3.31
RNU6-542P-201ENST00000516405 SARNPP82979 210 aaKnown RBP-5.65□□□□□ -3.31
RNU6-542P-201ENST00000516405 GNG4P50150 75 aa-5.66□□□□□ -3.32
RNU6-542P-201ENST00000516405 SCRIBQ14160 1630 aa-5.68□□□□□ -3.32
RNU6-542P-201ENST00000516405 ENHOQ6UWT2 76 aa-5.7□□□□□ -3.32
RNU6-542P-201ENST00000516405 MROH2AA6NES4 1674 aa-5.7□□□□□ -3.32
RNU6-542P-201ENST00000516405 MADDQ8WXG6 1647 aa-5.7□□□□□ -3.32
RNU6-542P-201ENST00000516405 C2orf88Q9BSF0 95 aa-5.72□□□□□ -3.33
RNU6-542P-201ENST00000516405 TMEM203Q969S6 136 aa-5.73□□□□□ -3.33
RNU6-542P-201ENST00000516405 KDM5DQ9BY66 1539 aa-5.74□□□□□ -3.33
RNU6-542P-201ENST00000516405 PVALEFA0A1B0GWK0 134 aa-5.75□□□□□ -3.33
RNU6-542P-201ENST00000516405 ALS2Q96Q42 1657 aa-5.76□□□□□ -3.33
RNU6-542P-201ENST00000516405 DEFB133Q30KQ1 61 aa-5.77□□□□□ -3.33
RNU6-542P-201ENST00000516405 DEFB114Q30KQ6 69 aa-5.77□□□□□ -3.33
RNU6-542P-201ENST00000516405 CEP162Q5TB80 1403 aa-5.78□□□□□ -3.33
RNU6-542P-201ENST00000516405 DLEU1O43261 78 aa-5.79□□□□□ -3.34
RNU6-542P-201ENST00000516405 GTF2H5Q6ZYL4 71 aa-5.79□□□□□ -3.34
RNU6-542P-201ENST00000516405 LINC00643Q86TS7 51 aa-5.79□□□□□ -3.34
RNU6-542P-201ENST00000516405 CORTO00230 105 aa-5.8□□□□□ -3.34
RNU6-542P-201ENST00000516405 ATP5EP2Q5VTU8 51 aa-5.8□□□□□ -3.34
RNU6-542P-201ENST00000516405 DEFB131AP59861 70 aa-5.81□□□□□ -3.34
RNU6-542P-201ENST00000516405 A0A087WXM4 84 aa-5.83□□□□□ -3.34
RNU6-542P-201ENST00000516405 NDUFA2O43678 99 aa-5.84□□□□□ -3.34
RNU6-542P-201ENST00000516405 SMIM13P0DJ93 91 aa-5.84□□□□□ -3.34
RNU6-542P-201ENST00000516405 SNRPFP62306 86 aaKnown RBP-5.85□□□□□ -3.35
RNU6-542P-201ENST00000516405 LINC00308Q8TCZ7 52 aa-5.87□□□□□ -3.35
RNU6-542P-201ENST00000516405 TSC22D3Q99576 134 aa-5.87□□□□□ -3.35
RNU6-542P-201ENST00000516405 LMTK2Q8IWU2 1503 aa-5.89□□□□□ -3.35
RNU6-542P-201ENST00000516405 CD52P31358 61 aa-5.9□□□□□ -3.35
RNU6-542P-201ENST00000516405 NMES1Q9C002 83 aa-5.9□□□□□ -3.35
RNU6-542P-201ENST00000516405 GYPAP02724 150 aa-5.94□□□□□ -3.36
RNU6-542P-201ENST00000516405 S100A10P60903 97 aa-5.94□□□□□ -3.36
RNU6-542P-201ENST00000516405 TMEM167BQ9NRX6 74 aa-5.94□□□□□ -3.36
RNU6-542P-201ENST00000516405 ANKARQ7Z5J8 1434 aa-5.94□□□□□ -3.36
RNU6-542P-201ENST00000516405 EFCAB6Q5THR3 1501 aa-5.94□□□□□ -3.36
RNU6-542P-201ENST00000516405 A0A1B0GV90 55 aa-5.95□□□□□ -3.36
RNU6-542P-201ENST00000516405 VPS8Q8N3P4 1428 aa-5.97□□□□□ -3.36
RNU6-542P-201ENST00000516405 HTN1P15515 57 aa-6□□□□□ -3.37
RNU6-542P-201ENST00000516405 DEFB121Q5J5C9 76 aa-6□□□□□ -3.37
RNU6-542P-201ENST00000516405 RHPN1-AS1Q9BWJ2 59 aa-6.01□□□□□ -3.37
RNU6-542P-201ENST00000516405 GNG8Q9UK08 70 aa-6.05□□□□□ -3.38
RNU6-542P-201ENST00000516405 NCMAPQ5T1S8 102 aa-6.07□□□□□ -3.38
RNU6-542P-201ENST00000516405 DDX60Q8IY21 1712 aaKnown RBP-6.08□□□□□ -3.38
RNU6-542P-201ENST00000516405 H3BUT2 72 aa-6.08□□□□□ -3.38
RNU6-542P-201ENST00000516405 SYCP2Q9BX26 1530 aa-6.09□□□□□ -3.38
RNU6-542P-201ENST00000516405 K7EMI3 77 aa-6.09□□□□□ -3.38
RNU6-542P-201ENST00000516405 LOC105371267A0A1B0GV96 52 aa-6.1□□□□□ -3.39
RNU6-542P-201ENST00000516405 GOLGB1Q14789 3259 aaKnown RBP-6.1□□□□□ -3.39
RNU6-542P-201ENST00000516405 A0A096LNI7 61 aa-6.11□□□□□ -3.39
RNU6-542P-201ENST00000516405 S100A16Q96FQ6 103 aaKnown RBP-6.12□□□□□ -3.39
RNU6-542P-201ENST00000516405 TCEAL7Q9BRU2 100 aa-6.12□□□□□ -3.39
RNU6-542P-201ENST00000516405 SMIM2Q9BVW6 85 aa-6.12□□□□□ -3.39
RNU6-542P-201ENST00000516405 KANTRA0A1W2PQU2 76 aa-6.15□□□□□ -3.39
RNU6-542P-201ENST00000516405 H3BVH4 76 aa-6.16□□□□□ -3.4
RNU6-542P-201ENST00000516405 M0R1W7 72 aa-6.16□□□□□ -3.4
RNU6-542P-201ENST00000516405 PYY3Q5JQD4 70 aa-6.17□□□□□ -3.4
RNU6-542P-201ENST00000516405 ABCA8O94911 1581 aa-6.22□□□□□ -3.4
RNU6-542P-201ENST00000516405 PEG3Q9GZU2 1588 aa-6.22□□□□□ -3.4
RNU6-542P-201ENST00000516405 HMGN1P05114 100 aa-6.22□□□□□ -3.41
RNU6-542P-201ENST00000516405 RB1CC1Q8TDY2 1594 aa-6.23□□□□□ -3.41
RNU6-542P-201ENST00000516405 ABCC3O15438 1527 aa-6.23□□□□□ -3.41
RNU6-542P-201ENST00000516405 SNHG12Q9BXW3 62 aa-6.24□□□□□ -3.41
RNU6-542P-201ENST00000516405 NFAT5O94916 1531 aa-6.25□□□□□ -3.41
RNU6-542P-201ENST00000516405 DUOX2Q9NRD8 1548 aa-6.25□□□□□ -3.41
RNU6-542P-201ENST00000516405 ATXN8Q156A1 80 aa-6.25□□□□□ -3.41
RNU6-542P-201ENST00000516405 CNTLNQ9NXG0 1405 aa-6.25□□□□□ -3.41
RNU6-542P-201ENST00000516405 AGLP35573 1532 aa-6.27□□□□□ -3.41
RNU6-542P-201ENST00000516405 TFF3Q07654 80 aa-6.28□□□□□ -3.41
RNU6-542P-201ENST00000516405 CFAP74Q9C0B2 1584 aa-6.28□□□□□ -3.42
RNU6-542P-201ENST00000516405 LINC01590Q5TEZ4 76 aa-6.29□□□□□ -3.42
RNU6-542P-201ENST00000516405 CLTCL1P53675 1640 aa-6.29□□□□□ -3.42
RNU6-542P-201ENST00000516405 IGIPA6NJ69 53 aa-6.33□□□□□ -3.42
RNU6-542P-201ENST00000516405 TDRG1Q3Y452 100 aa-6.33□□□□□ -3.42
RNU6-542P-201ENST00000516405 DEFB124Q8NES8 71 aa-6.33□□□□□ -3.42
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms