RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 SMIM26A0A096LP01 95 aa5.5□□□□□ -1.53
SNHG4-208ENST00000514110 S4R3F8 94 aa5.5□□□□□ -1.53
SNHG4-208ENST00000514110 Q5VV11 94 aa5.49□□□□□ -1.53
SNHG4-208ENST00000514110 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
SNHG4-208ENST00000514110 LCA10Q71F78 164 aa5.48□□□□□ -1.53
SNHG4-208ENST00000514110 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
SNHG4-208ENST00000514110 CSAG1Q6PB30 78 aa5.47□□□□□ -1.53
SNHG4-208ENST00000514110 C1orf64Q8NEQ6 169 aa5.47□□□□□ -1.53
SNHG4-208ENST00000514110 KTN1-AS1Q86SY8 53 aa5.46□□□□□ -1.54
SNHG4-208ENST00000514110 CCDC179H3BU77 68 aa5.43□□□□□ -1.54
SNHG4-208ENST00000514110 KRTAP10-5P60370 271 aa5.43□□□□□ -1.54
SNHG4-208ENST00000514110 SPCS1Q9Y6A9 102 aa5.43□□□□□ -1.54
SNHG4-208ENST00000514110 UBL5Q9BZL1 73 aa5.42□□□□□ -1.54
SNHG4-208ENST00000514110 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
SNHG4-208ENST00000514110 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
SNHG4-208ENST00000514110 A8MUN3 132 aa5.4□□□□□ -1.54
SNHG4-208ENST00000514110 TMEM258P61165 79 aa5.4□□□□□ -1.54
SNHG4-208ENST00000514110 KLKP1Q107X0 134 aa5.4□□□□□ -1.54
SNHG4-208ENST00000514110 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
SNHG4-208ENST00000514110 PRO0461Q9UI25 63 aa5.38□□□□□ -1.55
SNHG4-208ENST00000514110 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
SNHG4-208ENST00000514110 TP53AIP1Q9HCN2 124 aa5.37□□□□□ -1.55
SNHG4-208ENST00000514110 KRTAP5-9P26371 169 aa5.35□□□□□ -1.55
SNHG4-208ENST00000514110 A0A087WVE0 104 aa5.34□□□□□ -1.55
SNHG4-208ENST00000514110 KRTAP20-1Q3LI63 56 aa5.34□□□□□ -1.55
SNHG4-208ENST00000514110 NEBP20929 6669 aa5.33□□□□□ -1.56
SNHG4-208ENST00000514110 OCR1Q9BZK8 76 aa5.33□□□□□ -1.56
SNHG4-208ENST00000514110 CYP4F30PQ9H0H9 118 aa5.32□□□□□ -1.56
SNHG4-208ENST00000514110 K7EP34 96 aa5.31□□□□□ -1.56
SNHG4-208ENST00000514110 UQCRQO14949 82 aa5.3□□□□□ -1.56
SNHG4-208ENST00000514110 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
SNHG4-208ENST00000514110 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
SNHG4-208ENST00000514110 KMT2DO14686 5537 aa5.25□□□□□ -1.57
SNHG4-208ENST00000514110 TRAV22A0A0B4J277 110 aa5.24□□□□□ -1.57
SNHG4-208ENST00000514110 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
SNHG4-208ENST00000514110 LOC101927531A0A1B0GV80 90 aa5.23□□□□□ -1.57
SNHG4-208ENST00000514110 SERP1Q9Y6X1 66 aa5.23□□□□□ -1.57
SNHG4-208ENST00000514110 ETDBQ3ZM63 59 aa5.22□□□□□ -1.57
SNHG4-208ENST00000514110 MT-ATP8P03928 68 aa5.2□□□□□ -1.58
SNHG4-208ENST00000514110 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
SNHG4-208ENST00000514110 F8W1H4 67 aa5.19□□□□□ -1.58
SNHG4-208ENST00000514110 H0YAA0 97 aa5.19□□□□□ -1.58
SNHG4-208ENST00000514110 NDUFC1O43677 76 aa5.19□□□□□ -1.58
SNHG4-208ENST00000514110 H0Y9P7 68 aa5.15□□□□□ -1.59
SNHG4-208ENST00000514110 KRTAP2-3P0C7H8 128 aa5.15□□□□□ -1.59
SNHG4-208ENST00000514110 MT1XP80297 61 aa5.15□□□□□ -1.59
SNHG4-208ENST00000514110 ADM2Q7Z4H4 148 aa5.15□□□□□ -1.59
SNHG4-208ENST00000514110 SPRR2FQ96RM1 72 aa5.15□□□□□ -1.59
SNHG4-208ENST00000514110 KRTAP2-4Q9BYR9 128 aa5.15□□□□□ -1.59
SNHG4-208ENST00000514110 HIST1H4AP62805 103 aaKnown RBP5.14□□□□□ -1.59
SNHG4-208ENST00000514110 ATOX1O00244 68 aa5.12□□□□□ -1.59
SNHG4-208ENST00000514110 ACYP1P07311 99 aa5.12□□□□□ -1.59
SNHG4-208ENST00000514110 COX7CP15954 63 aa5.12□□□□□ -1.59
SNHG4-208ENST00000514110 PRO2289Q9P1D8 64 aa5.12□□□□□ -1.59
SNHG4-208ENST00000514110 SPRR2EP22531 72 aa5.11□□□□□ -1.59
SNHG4-208ENST00000514110 SPRR2BP35325 72 aa5.11□□□□□ -1.59
SNHG4-208ENST00000514110 SPRR2AP35326 72 aa5.11□□□□□ -1.59
SNHG4-208ENST00000514110 CAMK2N1Q7Z7J9 78 aa5.1□□□□□ -1.59
SNHG4-208ENST00000514110 ATP5EP2Q5VTU8 51 aa5.08□□□□□ -1.6
SNHG4-208ENST00000514110 KRTAP8-1Q8IUC2 63 aa5.07□□□□□ -1.6
SNHG4-208ENST00000514110 PLAC4Q8WY50 150 aa5.07□□□□□ -1.6
SNHG4-208ENST00000514110 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
SNHG4-208ENST00000514110 K7ERS5 55 aa5.04□□□□□ -1.6
SNHG4-208ENST00000514110 LCE1AQ5T7P2 110 aa5.04□□□□□ -1.6
SNHG4-208ENST00000514110 LINC00208Q96KT6 92 aa5.04□□□□□ -1.6
SNHG4-208ENST00000514110 P0C880 135 aa5.03□□□□□ -1.6
SNHG4-208ENST00000514110 KRTAP12-2P59991 146 aa5.03□□□□□ -1.6
SNHG4-208ENST00000514110 R4GN34 69 aa5.02□□□□□ -1.61
SNHG4-208ENST00000514110 LUZP6Q538Z0 58 aa5.01□□□□□ -1.61
SNHG4-208ENST00000514110 KRTAP4-8A0A0G2JLE6 195 aa5□□□□□ -1.61
SNHG4-208ENST00000514110 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
SNHG4-208ENST00000514110 M0QZ58 72 aa4.99□□□□□ -1.61
SNHG4-208ENST00000514110 KRTAP2-2Q9BYT5 123 aa4.97□□□□□ -1.61
SNHG4-208ENST00000514110 KRTAP2-1Q9BYU5 128 aa4.97□□□□□ -1.61
SNHG4-208ENST00000514110 LINC00643Q86TS7 51 aa4.96□□□□□ -1.62
SNHG4-208ENST00000514110 C20orf197Q8N268 126 aa4.96□□□□□ -1.62
SNHG4-208ENST00000514110 SPRR2DP22532 72 aa4.95□□□□□ -1.62
SNHG4-208ENST00000514110 KRTAP10-7P60409 375 aaPredicted RBP4.91□□□□□ -1.62
SNHG4-208ENST00000514110 DMAC1Q96GE9 116 aa4.91□□□□□ -1.62
SNHG4-208ENST00000514110 A6NED7 52 aa4.89□□□□□ -1.63
SNHG4-208ENST00000514110 SERP2Q8N6R1 65 aa4.88□□□□□ -1.63
SNHG4-208ENST00000514110 H3BPC8 53 aa4.87□□□□□ -1.63
SNHG4-208ENST00000514110 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
SNHG4-208ENST00000514110 Q1T7F1 81 aa4.85□□□□□ -1.63
SNHG4-208ENST00000514110 LCE3BQ5TA77 95 aa4.83□□□□□ -1.64
SNHG4-208ENST00000514110 TRAV7A0A075B6U4 112 aa4.78□□□□□ -1.64
SNHG4-208ENST00000514110 ROMO1P60602 79 aa4.76□□□□□ -1.65
SNHG4-208ENST00000514110 ACYP2P14621 99 aa4.74□□□□□ -1.65
SNHG4-208ENST00000514110 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
SNHG4-208ENST00000514110 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
SNHG4-208ENST00000514110 CYSTM1Q9H1C7 97 aa4.7□□□□□ -1.66
SNHG4-208ENST00000514110 H7BZZ5 65 aa4.69□□□□□ -1.66
SNHG4-208ENST00000514110 CDC42SE1Q9NRR8 79 aa4.66□□□□□ -1.66
SNHG4-208ENST00000514110 CHKB-CPT1BH3BT56 60 aa4.65□□□□□ -1.67
SNHG4-208ENST00000514110 KRTAP4-12Q9BQ66 201 aa4.65□□□□□ -1.67
SNHG4-208ENST00000514110 KRTAP13-4Q3LI77 160 aa4.64□□□□□ -1.67
SNHG4-208ENST00000514110 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
SNHG4-208ENST00000514110 LCE5AQ5TCM9 118 aa4.6□□□□□ -1.67
SNHG4-208ENST00000514110 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
SNHG4-208ENST00000514110 MIR22HGQ0VDD5 57 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 243.5 ms