RNA–Protein interactions for RNA: ENST00000514027.5

SDHA-216, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 2,209 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-216ENST00000514027 KRTAP23-1A1A580 65 aa6.72□□□□□ -1.33
SDHA-216ENST00000514027 NDUFAF8A1L188 74 aa6.7□□□□□ -1.34
SDHA-216ENST00000514027 SPINT4Q6UDR6 99 aa6.7□□□□□ -1.34
SDHA-216ENST00000514027 FLG2Q5D862 2391 aaPredicted RBP6.69□□□□□ -1.34
SDHA-216ENST00000514027 A0A1B0GU33 70 aa6.69□□□□□ -1.34
SDHA-216ENST00000514027 KRTAP3-1Q9BYR8 98 aa6.66□□□□□ -1.34
SDHA-216ENST00000514027 H1FX-AS1Q4G0G2 97 aa6.66□□□□□ -1.34
SDHA-216ENST00000514027 Q5VSD8 79 aa6.66□□□□□ -1.34
SDHA-216ENST00000514027 K7ERS5 55 aa6.65□□□□□ -1.34
SDHA-216ENST00000514027 LRP1Q07954 4544 aaKnown RBP6.62□□□□□ -1.35
SDHA-216ENST00000514027 KRTAP15-1Q3LI76 137 aa6.62□□□□□ -1.35
SDHA-216ENST00000514027 HSPG2P98160 4391 aa6.6□□□□□ -1.35
SDHA-216ENST00000514027 KRTAP10-8P60410 259 aa6.59□□□□□ -1.35
SDHA-216ENST00000514027 COX6B2Q6YFQ2 88 aa6.57□□□□□ -1.36
SDHA-216ENST00000514027 TPRXLQ17RH7 258 aa6.56□□□□□ -1.36
SDHA-216ENST00000514027 FAT3Q8TDW7 4589 aa6.55□□□□□ -1.36
SDHA-216ENST00000514027 TNXBP22105 4242 aa6.55□□□□□ -1.36
SDHA-216ENST00000514027 RYR1P21817 5038 aa6.55□□□□□ -1.36
SDHA-216ENST00000514027 DMBT1Q9UGM3 2413 aaPredicted RBP6.53□□□□□ -1.36
SDHA-216ENST00000514027 EPPK1P58107 5090 aaKnown RBP6.52□□□□□ -1.36
SDHA-216ENST00000514027 RPL37P61927 97 aaKnown RBP6.52□□□□□ -1.37
SDHA-216ENST00000514027 KRTAP17-1Q9BYP8 105 aa6.52□□□□□ -1.37
SDHA-216ENST00000514027 XP32Q5T750 250 aa6.5□□□□□ -1.37
SDHA-216ENST00000514027 CAMK2N1Q7Z7J9 78 aa6.5□□□□□ -1.37
SDHA-216ENST00000514027 KRTAP3-3Q9BYR6 98 aa6.5□□□□□ -1.37
SDHA-216ENST00000514027 KRTAP3-2Q9BYR7 98 aa6.5□□□□□ -1.37
SDHA-216ENST00000514027 KIAA1109Q2LD37 5005 aa6.49□□□□□ -1.37
SDHA-216ENST00000514027 C10orf95Q9H7T3 257 aa6.45□□□□□ -1.38
SDHA-216ENST00000514027 MYCBP2O75592 4640 aa6.43□□□□□ -1.38
SDHA-216ENST00000514027 MT1HL1P0DM35 61 aa6.42□□□□□ -1.38
SDHA-216ENST00000514027 S4R3F8 94 aa6.39□□□□□ -1.39
SDHA-216ENST00000514027 KRTAP10-6P60371 365 aaPredicted RBP6.31□□□□□ -1.4
SDHA-216ENST00000514027 A0A0D9SG42 100 aa6.3□□□□□ -1.4
SDHA-216ENST00000514027 KRTAP13-4Q3LI77 160 aa6.29□□□□□ -1.4
SDHA-216ENST00000514027 KRTAP4-5Q9BYR2 181 aa6.29□□□□□ -1.4
SDHA-216ENST00000514027 LPAP08519 4548 aa6.26□□□□□ -1.41
SDHA-216ENST00000514027 LRP2P98164 4655 aa6.23□□□□□ -1.41
SDHA-216ENST00000514027 BIRC6Q9NR09 4857 aa6.2□□□□□ -1.42
SDHA-216ENST00000514027 ABCA13Q86UQ4 5058 aa6.17□□□□□ -1.42
SDHA-216ENST00000514027 HERC2O95714 4834 aa6.15□□□□□ -1.42
SDHA-216ENST00000514027 KRTAP12-2P59991 146 aa6.14□□□□□ -1.43
SDHA-216ENST00000514027 LCE2DQ5TA82 110 aaPredicted RBP6.06□□□□□ -1.44
SDHA-216ENST00000514027 KRTAP12-1P59990 96 aa6.05□□□□□ -1.44
SDHA-216ENST00000514027 M0QZ58 72 aa6□□□□□ -1.45
SDHA-216ENST00000514027 PLAC4Q8WY50 150 aa6□□□□□ -1.45
SDHA-216ENST00000514027 KRTAP4-1Q9BYQ7 146 aa5.97□□□□□ -1.45
SDHA-216ENST00000514027 R4GN34 69 aa5.94□□□□□ -1.46
SDHA-216ENST00000514027 MUC17Q685J3 4493 aa5.93□□□□□ -1.46
SDHA-216ENST00000514027 PCLOQ9Y6V0 5065 aa5.9□□□□□ -1.46
SDHA-216ENST00000514027 LORP23490 312 aaPredicted RBP5.86□□□□□ -1.47
SDHA-216ENST00000514027 LCE2AQ5TA79 106 aaPredicted RBP5.86□□□□□ -1.47
SDHA-216ENST00000514027 LCE2CQ5TA81 110 aa5.82□□□□□ -1.48
SDHA-216ENST00000514027 HERC1Q15751 4861 aa5.81□□□□□ -1.48
SDHA-216ENST00000514027 KRTAP19-2Q3LHN2 52 aa5.8□□□□□ -1.48
SDHA-216ENST00000514027 MUC2Q02817 5179 aa5.76□□□□□ -1.49
SDHA-216ENST00000514027 HMCN2Q8NDA2 5059 aa5.74□□□□□ -1.49
SDHA-216ENST00000514027 PRO2289Q9P1D8 64 aa5.7□□□□□ -1.5
SDHA-216ENST00000514027 PP632Q6XCG6 107 aa5.63□□□□□ -1.51
SDHA-216ENST00000514027 FLGP20930 4061 aaPredicted RBP5.6□□□□□ -1.51
SDHA-216ENST00000514027 LCE2BO14633 110 aa5.55□□□□□ -1.52
SDHA-216ENST00000514027 SPRR5A0A1B0GTR4 108 aa5.51□□□□□ -1.53
SDHA-216ENST00000514027 FAT4Q6V0I7 4981 aa5.48□□□□□ -1.53
SDHA-216ENST00000514027 M0R2T5 61 aa5.48□□□□□ -1.53
SDHA-216ENST00000514027 RNF213Q63HN8 5207 aa5.47□□□□□ -1.53
SDHA-216ENST00000514027 UBR4Q5T4S7 5183 aa5.47□□□□□ -1.53
SDHA-216ENST00000514027 TNP1P09430 55 aa5.39□□□□□ -1.55
SDHA-216ENST00000514027 MT1HP80294 61 aa5.38□□□□□ -1.55
SDHA-216ENST00000514027 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
SDHA-216ENST00000514027 INE1O15225 51 aa5.35□□□□□ -1.55
SDHA-216ENST00000514027 KRTAP19-1Q8IUB9 90 aa5.34□□□□□ -1.55
SDHA-216ENST00000514027 KRTAP10-10P60014 251 aa5.31□□□□□ -1.56
SDHA-216ENST00000514027 MT1FP04733 61 aa5.29□□□□□ -1.56
SDHA-216ENST00000514027 MT2AP02795 61 aa5.28□□□□□ -1.56
SDHA-216ENST00000514027 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
SDHA-216ENST00000514027 LCE3AQ5TA76 89 aa5.12□□□□□ -1.59
SDHA-216ENST00000514027 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
SDHA-216ENST00000514027 MT1BP07438 61 aa5.08□□□□□ -1.6
SDHA-216ENST00000514027 KRTAP10-5P60370 271 aa5.04□□□□□ -1.6
SDHA-216ENST00000514027 MT1XP80297 61 aa5.03□□□□□ -1.6
SDHA-216ENST00000514027 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
SDHA-216ENST00000514027 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
SDHA-216ENST00000514027 KRTAP8-1Q8IUC2 63 aa4.93□□□□□ -1.62
SDHA-216ENST00000514027 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
SDHA-216ENST00000514027 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
SDHA-216ENST00000514027 USH2AO75445 5202 aa4.75□□□□□ -1.65
SDHA-216ENST00000514027 KRTAP19-5Q3LI72 72 aa4.69□□□□□ -1.66
SDHA-216ENST00000514027 KMT2DO14686 5537 aa4.64□□□□□ -1.67
SDHA-216ENST00000514027 KRTAP4-8A0A0G2JLE6 195 aa4.63□□□□□ -1.67
SDHA-216ENST00000514027 KRTAP4-8Q9BYQ9 185 aa4.63□□□□□ -1.67
SDHA-216ENST00000514027 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
SDHA-216ENST00000514027 LCE3CQ5T5A8 94 aa4.57□□□□□ -1.68
SDHA-216ENST00000514027 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
SDHA-216ENST00000514027 SSPOA2VEC9 5147 aa4.5□□□□□ -1.69
SDHA-216ENST00000514027 KRTAP2-2Q9BYT5 123 aa4.48□□□□□ -1.69
SDHA-216ENST00000514027 KRTAP19-7Q3SYF9 63 aa4.48□□□□□ -1.69
SDHA-216ENST00000514027 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
SDHA-216ENST00000514027 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
SDHA-216ENST00000514027 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
SDHA-216ENST00000514027 KRTAP19-6Q3LI70 58 aa4.4□□□□□ -1.7
SDHA-216ENST00000514027 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms