RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 KRTAP3-1Q9BYR8 98 aa4.91□□□□□ -1.62
DHFR-206ENST00000513048 CYP4F30PQ9H0H9 118 aa4.9□□□□□ -1.63
DHFR-206ENST00000513048 IGKV2D-30A0A075B6S6 120 aa4.87□□□□□ -1.63
DHFR-206ENST00000513048 SPINK7P58062 85 aa4.87□□□□□ -1.63
DHFR-206ENST00000513048 SEC61BP60468 96 aaKnown RBP4.87□□□□□ -1.63
DHFR-206ENST00000513048 H7BZZ5 65 aa4.86□□□□□ -1.63
DHFR-206ENST00000513048 C7orf65Q6ZTY9 151 aa4.86□□□□□ -1.63
DHFR-206ENST00000513048 KRTAP4-1Q9BYQ7 146 aa4.85□□□□□ -1.63
DHFR-206ENST00000513048 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
DHFR-206ENST00000513048 NDUFC1O43677 76 aa4.83□□□□□ -1.64
DHFR-206ENST00000513048 HRES1P13985 223 aa4.82□□□□□ -1.64
DHFR-206ENST00000513048 MPLKIPQ8TAP9 179 aa4.79□□□□□ -1.64
DHFR-206ENST00000513048 SPANXA2-OT1Q8N9U9 137 aa4.78□□□□□ -1.64
DHFR-206ENST00000513048 TMEM258P61165 79 aa4.76□□□□□ -1.65
DHFR-206ENST00000513048 C4orf26Q17RF5 130 aa4.76□□□□□ -1.65
DHFR-206ENST00000513048 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
DHFR-206ENST00000513048 COX6B2Q6YFQ2 88 aa4.74□□□□□ -1.65
DHFR-206ENST00000513048 FAM236DA0A1B0GTK5 79 aa4.73□□□□□ -1.65
DHFR-206ENST00000513048 FAM236CP0DP71 79 aa4.73□□□□□ -1.65
DHFR-206ENST00000513048 DMAC1Q96GE9 116 aa4.73□□□□□ -1.65
DHFR-206ENST00000513048 UBR4Q5T4S7 5183 aa4.71□□□□□ -1.66
DHFR-206ENST00000513048 ATP5EP56381 51 aaPredicted RBP4.71□□□□□ -1.66
DHFR-206ENST00000513048 RNF213Q63HN8 5207 aa4.69□□□□□ -1.66
DHFR-206ENST00000513048 A8MUN3 132 aa4.68□□□□□ -1.66
DHFR-206ENST00000513048 RBM12B-AS1Q9P1G2 102 aa4.67□□□□□ -1.66
DHFR-206ENST00000513048 ACYP2P14621 99 aa4.65□□□□□ -1.67
DHFR-206ENST00000513048 H1FX-AS1Q4G0G2 97 aa4.64□□□□□ -1.67
DHFR-206ENST00000513048 COA5Q86WW8 74 aa4.63□□□□□ -1.67
DHFR-206ENST00000513048 SERP1Q9Y6X1 66 aa4.62□□□□□ -1.67
DHFR-206ENST00000513048 MUC2Q02817 5179 aa4.61□□□□□ -1.67
DHFR-206ENST00000513048 RPS28P62857 69 aaKnown RBP4.59□□□□□ -1.67
DHFR-206ENST00000513048 LCA10Q71F78 164 aa4.57□□□□□ -1.68
DHFR-206ENST00000513048 S4R3F8 94 aa4.57□□□□□ -1.68
DHFR-206ENST00000513048 CHKB-CPT1BH3BT56 60 aa4.54□□□□□ -1.68
DHFR-206ENST00000513048 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
DHFR-206ENST00000513048 MT1HP80294 61 aa4.52□□□□□ -1.69
DHFR-206ENST00000513048 FAT4Q6V0I7 4981 aa4.5□□□□□ -1.69
DHFR-206ENST00000513048 KRTAP23-1A1A580 65 aa4.5□□□□□ -1.69
DHFR-206ENST00000513048 SMIM26A0A096LP01 95 aa4.48□□□□□ -1.69
DHFR-206ENST00000513048 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
DHFR-206ENST00000513048 SPTSSBQ8NFR3 76 aa4.48□□□□□ -1.69
DHFR-206ENST00000513048 CSAG1Q6PB30 78 aa4.47□□□□□ -1.69
DHFR-206ENST00000513048 LINC01558Q9Y6Z2 57 aa4.44□□□□□ -1.7
DHFR-206ENST00000513048 Q1T7F1 81 aa4.43□□□□□ -1.7
DHFR-206ENST00000513048 H0YAA0 97 aa4.4□□□□□ -1.71
DHFR-206ENST00000513048 KRTAP10-6P60371 365 aaPredicted RBP4.39□□□□□ -1.71
DHFR-206ENST00000513048 M0R2T5 61 aa4.38□□□□□ -1.71
DHFR-206ENST00000513048 V9GYY9 64 aa4.38□□□□□ -1.71
DHFR-206ENST00000513048 ADM2Q7Z4H4 148 aa4.36□□□□□ -1.71
DHFR-206ENST00000513048 A0A1B0GU69 56 aa4.35□□□□□ -1.71
DHFR-206ENST00000513048 P0C880 135 aa4.35□□□□□ -1.71
DHFR-206ENST00000513048 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
DHFR-206ENST00000513048 PSPHP1O15172 72 aa4.33□□□□□ -1.72
DHFR-206ENST00000513048 MT2AP02795 61 aa4.33□□□□□ -1.72
DHFR-206ENST00000513048 Q5VV11 94 aa4.33□□□□□ -1.72
DHFR-206ENST00000513048 SEC61GP60059 68 aa4.32□□□□□ -1.72
DHFR-206ENST00000513048 MT1FP04733 61 aa4.3□□□□□ -1.72
DHFR-206ENST00000513048 A0A1B0GU33 70 aa4.27□□□□□ -1.73
DHFR-206ENST00000513048 KRTAP13-4Q3LI77 160 aa4.26□□□□□ -1.73
DHFR-206ENST00000513048 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
DHFR-206ENST00000513048 CRIPTQ9P021 101 aa4.22□□□□□ -1.73
DHFR-206ENST00000513048 SPATA8Q6RVD6 105 aa4.21□□□□□ -1.74
DHFR-206ENST00000513048 M0QZ58 72 aa4.2□□□□□ -1.74
DHFR-206ENST00000513048 UQCR11O14957 56 aa4.2□□□□□ -1.74
DHFR-206ENST00000513048 SPRR2GQ9BYE4 73 aa4.19□□□□□ -1.74
DHFR-206ENST00000513048 R4GN34 69 aa4.18□□□□□ -1.74
DHFR-206ENST00000513048 A6NED7 52 aa4.17□□□□□ -1.74
DHFR-206ENST00000513048 MIR22HGQ0VDD5 57 aa4.16□□□□□ -1.74
DHFR-206ENST00000513048 A8MU10 97 aa4.15□□□□□ -1.75
DHFR-206ENST00000513048 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
DHFR-206ENST00000513048 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
DHFR-206ENST00000513048 A0A0D9SG42 100 aa4.1□□□□□ -1.75
DHFR-206ENST00000513048 LINC01554Q52M75 96 aa4.09□□□□□ -1.75
DHFR-206ENST00000513048 A6NN06 94 aa4.08□□□□□ -1.76
DHFR-206ENST00000513048 KRTAP12-1P59990 96 aa4.08□□□□□ -1.76
DHFR-206ENST00000513048 MT1BP07438 61 aa4.07□□□□□ -1.76
DHFR-206ENST00000513048 BRK1Q8WUW1 75 aa4.06□□□□□ -1.76
DHFR-206ENST00000513048 KRTAP12-2P59991 146 aa4.05□□□□□ -1.76
DHFR-206ENST00000513048 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
DHFR-206ENST00000513048 USH2AO75445 5202 aa3.98□□□□□ -1.77
DHFR-206ENST00000513048 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
DHFR-206ENST00000513048 PRO0628Q9UI54 55 aa3.95□□□□□ -1.78
DHFR-206ENST00000513048 K7ERS5 55 aa3.93□□□□□ -1.78
DHFR-206ENST00000513048 MT1XP80297 61 aa3.91□□□□□ -1.78
DHFR-206ENST00000513048 KRTAP10-5P60370 271 aa3.9□□□□□ -1.79
DHFR-206ENST00000513048 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.79
DHFR-206ENST00000513048 CAMK2N1Q7Z7J9 78 aa3.9□□□□□ -1.79
DHFR-206ENST00000513048 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
DHFR-206ENST00000513048 KRTAP19-6Q3LI70 58 aa3.87□□□□□ -1.79
DHFR-206ENST00000513048 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
DHFR-206ENST00000513048 PMAIP1Q13794 54 aa3.84□□□□□ -1.79
DHFR-206ENST00000513048 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
DHFR-206ENST00000513048 FSIP2Q5CZC0 6907 aa3.81□□□□□ -1.8
DHFR-206ENST00000513048 ROMO1P60602 79 aa3.81□□□□□ -1.8
DHFR-206ENST00000513048 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
DHFR-206ENST00000513048 KRTAP10-7P60409 375 aaPredicted RBP3.76□□□□□ -1.81
DHFR-206ENST00000513048 CRCT1Q9UGL9 99 aa3.75□□□□□ -1.81
DHFR-206ENST00000513048 KRTAP25-1Q3LHN0 102 aa3.72□□□□□ -1.81
DHFR-206ENST00000513048 TNP1P09430 55 aa3.71□□□□□ -1.82
DHFR-206ENST00000513048 KRTAP10-12P60413 245 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 1202.5 ms