RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 DEFB104AQ8WTQ1 72 aa1.74□□□□□ -2.13
CHD1-208ENST00000512392 PTPN13Q12923 2485 aa1.74□□□□□ -2.13
CHD1-208ENST00000512392 CREBBPQ92793 2442 aa1.74□□□□□ -2.13
CHD1-208ENST00000512392 EPG5Q9HCE0 2579 aa1.74□□□□□ -2.13
CHD1-208ENST00000512392 NOP10Q9NPE3 64 aaKnown RBP1.74□□□□□ -2.13
CHD1-208ENST00000512392 SETXQ7Z333 2677 aaKnown RBP1.74□□□□□ -2.13
CHD1-208ENST00000512392 NIPBLQ6KC79 2804 aaeCLIP1.73□□□□□ -2.13
CHD1-208ENST00000512392 ITPR3Q14573 2671 aa1.73□□□□□ -2.13
CHD1-208ENST00000512392 MUC19Q7Z5P9 8384 aa1.73□□□□□ -2.13
CHD1-208ENST00000512392 ANK3Q12955 4377 aaKnown RBP1.73□□□□□ -2.13
CHD1-208ENST00000512392 UBR5O95071 2799 aaPredicted RBP1.73□□□□□ -2.13
CHD1-208ENST00000512392 FLNAP21333 2647 aaKnown RBP1.73□□□□□ -2.13
CHD1-208ENST00000512392 NAV2Q8IVL1 2488 aa1.73□□□□□ -2.13
CHD1-208ENST00000512392 DEFB1P60022 68 aa1.72□□□□□ -2.13
CHD1-208ENST00000512392 CCDC168Q8NDH2 2452 aa1.72□□□□□ -2.13
CHD1-208ENST00000512392 TOMM7Q9P0U1 55 aa1.72□□□□□ -2.13
CHD1-208ENST00000512392 APCP25054 2843 aa1.72□□□□□ -2.13
CHD1-208ENST00000512392 MTORP42345 2549 aa1.71□□□□□ -2.13
CHD1-208ENST00000512392 ACANP16112 2415 aa1.71□□□□□ -2.14
CHD1-208ENST00000512392 GCN1Q92616 2671 aaKnown RBP1.7□□□□□ -2.14
CHD1-208ENST00000512392 ITPR2Q14571 2701 aa1.69□□□□□ -2.14
CHD1-208ENST00000512392 DEFB135Q30KP9 77 aa1.68□□□□□ -2.14
CHD1-208ENST00000512392 H3BUX3 64 aa1.68□□□□□ -2.14
CHD1-208ENST00000512392 SMR3AQ99954 134 aa1.67□□□□□ -2.14
CHD1-208ENST00000512392 NBEAL2Q6ZNJ1 2754 aa1.66□□□□□ -2.14
CHD1-208ENST00000512392 PDZD2O15018 2839 aa1.66□□□□□ -2.14
CHD1-208ENST00000512392 RHPN1-AS1Q9BWJ2 59 aa1.66□□□□□ -2.14
CHD1-208ENST00000512392 TENM1Q9UKZ4 2725 aa1.66□□□□□ -2.14
CHD1-208ENST00000512392 FASNP49327 2511 aaKnown RBP1.65□□□□□ -2.14
CHD1-208ENST00000512392 DEFB136Q30KP8 78 aa1.65□□□□□ -2.14
CHD1-208ENST00000512392 HIVEP1P15822 2718 aa1.65□□□□□ -2.15
CHD1-208ENST00000512392 NSD1Q96L73 2696 aaPredicted RBP1.64□□□□□ -2.15
CHD1-208ENST00000512392 CMYA5Q8N3K9 4069 aa1.64□□□□□ -2.15
CHD1-208ENST00000512392 UNC79Q9P2D8 2635 aa1.64□□□□□ -2.15
CHD1-208ENST00000512392 PKD1L1Q8TDX9 2849 aa1.64□□□□□ -2.15
CHD1-208ENST00000512392 TRRAPQ9Y4A5 3859 aa1.63□□□□□ -2.15
CHD1-208ENST00000512392 KRTAP2-3P0C7H8 128 aa1.63□□□□□ -2.15
CHD1-208ENST00000512392 KRTAP2-4Q9BYR9 128 aa1.63□□□□□ -2.15
CHD1-208ENST00000512392 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
CHD1-208ENST00000512392 HTN1P15515 57 aa1.63□□□□□ -2.15
CHD1-208ENST00000512392 TENM3Q9P273 2699 aa1.62□□□□□ -2.15
CHD1-208ENST00000512392 TEP1Q99973 2627 aaKnown RBP1.61□□□□□ -2.15
CHD1-208ENST00000512392 M0R2T5 61 aa1.6□□□□□ -2.15
CHD1-208ENST00000512392 DNAH1Q9P2D7 4330 aa1.6□□□□□ -2.15
CHD1-208ENST00000512392 DNAH10Q8IVF4 4471 aa1.59□□□□□ -2.16
CHD1-208ENST00000512392 STAB1Q9NY15 2570 aa1.59□□□□□ -2.16
CHD1-208ENST00000512392 DNAH3Q8TD57 4116 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 DNAH11Q96DT5 4516 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 MYCBP2O75592 4640 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 SPINK6Q6UWN8 80 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 NOTCH1P46531 2555 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 DNAH9Q9NYC9 4486 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 MAST4O15021 2626 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 HUWE1Q7Z6Z7 4374 aaKnown RBP1.58□□□□□ -2.16
CHD1-208ENST00000512392 FBN3Q75N90 2809 aa1.58□□□□□ -2.16
CHD1-208ENST00000512392 LYSTQ99698 3801 aa1.57□□□□□ -2.16
CHD1-208ENST00000512392 FLNBO75369 2602 aaKnown RBP1.57□□□□□ -2.16
CHD1-208ENST00000512392 KRTAP19-3Q7Z4W3 81 aa1.57□□□□□ -2.16
CHD1-208ENST00000512392 DMBT1Q9UGM3 2413 aaPredicted RBP1.56□□□□□ -2.16
CHD1-208ENST00000512392 NBEAL1Q6ZS30 2694 aa1.56□□□□□ -2.16
CHD1-208ENST00000512392 A0A096LPF7 62 aa1.56□□□□□ -2.16
CHD1-208ENST00000512392 KRTAP21-2Q3LI59 83 aa1.56□□□□□ -2.16
CHD1-208ENST00000512392 TNXBP22105 4242 aa1.55□□□□□ -2.16
CHD1-208ENST00000512392 COL7A1Q02388 2944 aa1.55□□□□□ -2.16
CHD1-208ENST00000512392 DEFB4AO15263 64 aa1.55□□□□□ -2.16
CHD1-208ENST00000512392 COL6A5A8TX70 2615 aa1.55□□□□□ -2.16
CHD1-208ENST00000512392 PRM1P04553 51 aa1.53□□□□□ -2.16
CHD1-208ENST00000512392 DNAH7Q8WXX0 4024 aa1.53□□□□□ -2.17
CHD1-208ENST00000512392 STAB2Q8WWQ8 2551 aa1.52□□□□□ -2.17
CHD1-208ENST00000512392 FAT2Q9NYQ8 4349 aa1.52□□□□□ -2.17
CHD1-208ENST00000512392 PLECQ15149 4684 aaKnown RBP1.52□□□□□ -2.17
CHD1-208ENST00000512392 TENM2Q9NT68 2774 aa1.52□□□□□ -2.17
CHD1-208ENST00000512392 DYNC2H1Q8NCM8 4307 aaKnown RBP1.51□□□□□ -2.17
CHD1-208ENST00000512392 PRKDCP78527 4128 aaKnown RBP1.51□□□□□ -2.17
CHD1-208ENST00000512392 HTN3P15516 51 aa1.51□□□□□ -2.17
CHD1-208ENST00000512392 M0QZ58 72 aa1.5□□□□□ -2.17
CHD1-208ENST00000512392 VPS13DQ5THJ4 4388 aa1.5□□□□□ -2.17
CHD1-208ENST00000512392 MGAM2Q2M2H8 2515 aa1.5□□□□□ -2.17
CHD1-208ENST00000512392 STARD9Q9P2P6 4700 aa1.5□□□□□ -2.17
CHD1-208ENST00000512392 DNAH8Q96JB1 4490 aa1.5□□□□□ -2.17
CHD1-208ENST00000512392 DNAH17Q9UFH2 4485 aa1.5□□□□□ -2.17
CHD1-208ENST00000512392 FRAS1Q86XX4 4008 aa1.49□□□□□ -2.17
CHD1-208ENST00000512392 DNAH2Q9P225 4427 aa1.48□□□□□ -2.17
CHD1-208ENST00000512392 AHNAK2Q8IVF2 5795 aa1.48□□□□□ -2.17
CHD1-208ENST00000512392 MACF1Q9UPN3 7388 aaKnown RBP1.48□□□□□ -2.17
CHD1-208ENST00000512392 TGP01266 2768 aa1.47□□□□□ -2.17
CHD1-208ENST00000512392 HECTD4Q9Y4D8 3996 aa1.47□□□□□ -2.17
CHD1-208ENST00000512392 SPART-AS1P0CW21 52 aa1.47□□□□□ -2.17
CHD1-208ENST00000512392 KMT2AQ03164 3969 aa1.46□□□□□ -2.18
CHD1-208ENST00000512392 DNAH6Q9C0G6 4158 aa1.46□□□□□ -2.18
CHD1-208ENST00000512392 DNAH5Q8TE73 4624 aa1.46□□□□□ -2.18
CHD1-208ENST00000512392 DNHD1Q96M86 4753 aa1.45□□□□□ -2.18
CHD1-208ENST00000512392 LINC01556Q5JQF7 62 aa1.44□□□□□ -2.18
CHD1-208ENST00000512392 H3BNG1 76 aa1.43□□□□□ -2.18
CHD1-208ENST00000512392 PKHD1P08F94 4074 aa1.42□□□□□ -2.18
CHD1-208ENST00000512392 HYDINQ4G0P3 5121 aa1.41□□□□□ -2.18
CHD1-208ENST00000512392 A0A096LNI7 61 aa1.41□□□□□ -2.18
CHD1-208ENST00000512392 PKD1P98161 4303 aa1.41□□□□□ -2.18
CHD1-208ENST00000512392 SACSQ9NZJ4 4579 aa1.4□□□□□ -2.19
CHD1-208ENST00000512392 LRP1BQ9NZR2 4599 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms