RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 HMCN2Q8NDA2 5059 aa7.7□□□□□ -1.18
SCLT1-209ENST00000511426 MUC17Q685J3 4493 aa7.7□□□□□ -1.18
SCLT1-209ENST00000511426 HERC1Q15751 4861 aa7.69□□□□□ -1.18
SCLT1-209ENST00000511426 Q1T7F1 81 aa7.69□□□□□ -1.18
SCLT1-209ENST00000511426 H1FX-AS1Q4G0G2 97 aa7.68□□□□□ -1.18
SCLT1-209ENST00000511426 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
SCLT1-209ENST00000511426 LINC01558Q9Y6Z2 57 aa7.61□□□□□ -1.19
SCLT1-209ENST00000511426 S4R3F8 94 aa7.6□□□□□ -1.19
SCLT1-209ENST00000511426 LCE2AQ5TA79 106 aaPredicted RBP7.55□□□□□ -1.2
SCLT1-209ENST00000511426 LCA10Q71F78 164 aa7.55□□□□□ -1.2
SCLT1-209ENST00000511426 PRR15LQ9BU68 103 aa7.53□□□□□ -1.2
SCLT1-209ENST00000511426 KRTAP19-2Q3LHN2 52 aa7.51□□□□□ -1.21
SCLT1-209ENST00000511426 SEC61GP60059 68 aa7.49□□□□□ -1.21
SCLT1-209ENST00000511426 A0A1B0GU69 56 aa7.48□□□□□ -1.21
SCLT1-209ENST00000511426 CSAG1Q6PB30 78 aa7.47□□□□□ -1.21
SCLT1-209ENST00000511426 PSPHP1O15172 72 aa7.44□□□□□ -1.22
SCLT1-209ENST00000511426 Q5VV11 94 aa7.43□□□□□ -1.22
SCLT1-209ENST00000511426 H0YAA0 97 aa7.38□□□□□ -1.23
SCLT1-209ENST00000511426 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
SCLT1-209ENST00000511426 UQCR11O14957 56 aa7.29□□□□□ -1.24
SCLT1-209ENST00000511426 MUC2Q02817 5179 aa7.29□□□□□ -1.24
SCLT1-209ENST00000511426 A6NED7 52 aa7.28□□□□□ -1.24
SCLT1-209ENST00000511426 UBR4Q5T4S7 5183 aa7.27□□□□□ -1.25
SCLT1-209ENST00000511426 KRTAP10-6P60371 365 aaPredicted RBP7.25□□□□□ -1.25
SCLT1-209ENST00000511426 A0A1B0GU33 70 aa7.24□□□□□ -1.25
SCLT1-209ENST00000511426 ADM2Q7Z4H4 148 aa7.23□□□□□ -1.25
SCLT1-209ENST00000511426 RNF213Q63HN8 5207 aa7.2□□□□□ -1.26
SCLT1-209ENST00000511426 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
SCLT1-209ENST00000511426 FLGP20930 4061 aaPredicted RBP7.19□□□□□ -1.26
SCLT1-209ENST00000511426 MT1HP80294 61 aa7.19□□□□□ -1.26
SCLT1-209ENST00000511426 BRK1Q8WUW1 75 aa7.18□□□□□ -1.26
SCLT1-209ENST00000511426 SPATA8Q6RVD6 105 aa7.17□□□□□ -1.26
SCLT1-209ENST00000511426 MIR22HGQ0VDD5 57 aa7.16□□□□□ -1.26
SCLT1-209ENST00000511426 P0C880 135 aa7.16□□□□□ -1.26
SCLT1-209ENST00000511426 PRO0628Q9UI54 55 aa7.14□□□□□ -1.27
SCLT1-209ENST00000511426 M0QZ58 72 aa7.12□□□□□ -1.27
SCLT1-209ENST00000511426 M0R2T5 61 aa7.12□□□□□ -1.27
SCLT1-209ENST00000511426 CRIPTQ9P021 101 aa7.07□□□□□ -1.28
SCLT1-209ENST00000511426 FAT4Q6V0I7 4981 aa7.03□□□□□ -1.28
SCLT1-209ENST00000511426 R4GN34 69 aa7.03□□□□□ -1.28
SCLT1-209ENST00000511426 LORP23490 312 aaPredicted RBP7.02□□□□□ -1.29
SCLT1-209ENST00000511426 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
SCLT1-209ENST00000511426 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
SCLT1-209ENST00000511426 A8MU10 97 aa6.96□□□□□ -1.29
SCLT1-209ENST00000511426 K7ERS5 55 aa6.93□□□□□ -1.3
SCLT1-209ENST00000511426 KRTAP9-8Q9BYQ0 159 aa6.93□□□□□ -1.3
SCLT1-209ENST00000511426 MT2AP02795 61 aa6.9□□□□□ -1.31
SCLT1-209ENST00000511426 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.87□□□□□ -1.31
SCLT1-209ENST00000511426 A0A0D9SG42 100 aa6.87□□□□□ -1.31
SCLT1-209ENST00000511426 A6NN06 94 aa6.87□□□□□ -1.31
SCLT1-209ENST00000511426 KRTAP9-2Q9BYQ4 174 aa6.86□□□□□ -1.31
SCLT1-209ENST00000511426 KRTAP10-10P60014 251 aa6.85□□□□□ -1.31
SCLT1-209ENST00000511426 SPRR2GQ9BYE4 73 aa6.84□□□□□ -1.31
SCLT1-209ENST00000511426 MT1FP04733 61 aa6.84□□□□□ -1.32
SCLT1-209ENST00000511426 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
SCLT1-209ENST00000511426 PMAIP1Q13794 54 aa6.81□□□□□ -1.32
SCLT1-209ENST00000511426 LINC01554Q52M75 96 aa6.8□□□□□ -1.32
SCLT1-209ENST00000511426 KRTAP12-1P59990 96 aa6.79□□□□□ -1.32
SCLT1-209ENST00000511426 KRTAP19-1Q8IUB9 90 aa6.74□□□□□ -1.33
SCLT1-209ENST00000511426 KRTAP12-2P59991 146 aa6.74□□□□□ -1.33
SCLT1-209ENST00000511426 SPINT4Q6UDR6 99 aa6.74□□□□□ -1.33
SCLT1-209ENST00000511426 LCE3BQ5TA77 95 aa6.68□□□□□ -1.34
SCLT1-209ENST00000511426 KRTAP9-3Q9BYQ3 159 aa6.68□□□□□ -1.34
SCLT1-209ENST00000511426 KRTAP19-8Q3LI54 63 aa6.66□□□□□ -1.34
SCLT1-209ENST00000511426 PLAC4Q8WY50 150 aa6.61□□□□□ -1.35
SCLT1-209ENST00000511426 ROMO1P60602 79 aa6.57□□□□□ -1.36
SCLT1-209ENST00000511426 CAMK2N1Q7Z7J9 78 aa6.57□□□□□ -1.36
SCLT1-209ENST00000511426 KTN1-AS1Q86SY8 53 aa6.56□□□□□ -1.36
SCLT1-209ENST00000511426 KRTAP4-8A0A0G2JLE6 195 aa6.51□□□□□ -1.37
SCLT1-209ENST00000511426 KRTAP4-12Q9BQ66 201 aa6.51□□□□□ -1.37
SCLT1-209ENST00000511426 KRTAP9-9Q9BYP9 154 aa6.51□□□□□ -1.37
SCLT1-209ENST00000511426 KRTAP9-4Q9BYQ2 154 aa6.51□□□□□ -1.37
SCLT1-209ENST00000511426 MT1BP07438 61 aa6.5□□□□□ -1.37
SCLT1-209ENST00000511426 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
SCLT1-209ENST00000511426 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
SCLT1-209ENST00000511426 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
SCLT1-209ENST00000511426 KRTAP4-7Q9BYR0 210 aa6.32□□□□□ -1.4
SCLT1-209ENST00000511426 TNP1P09430 55 aa6.3□□□□□ -1.4
SCLT1-209ENST00000511426 MT1XP80297 61 aa6.29□□□□□ -1.4
SCLT1-209ENST00000511426 KRTAP10-5P60370 271 aa6.28□□□□□ -1.4
SCLT1-209ENST00000511426 PRAC1Q96KF2 57 aa6.27□□□□□ -1.41
SCLT1-209ENST00000511426 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
SCLT1-209ENST00000511426 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
SCLT1-209ENST00000511426 PP632Q6XCG6 107 aa6.19□□□□□ -1.42
SCLT1-209ENST00000511426 KRTAP19-6Q3LI70 58 aa6.14□□□□□ -1.43
SCLT1-209ENST00000511426 USH2AO75445 5202 aa6.13□□□□□ -1.43
SCLT1-209ENST00000511426 KRTAP4-9Q9BYQ8 210 aa6.08□□□□□ -1.44
SCLT1-209ENST00000511426 KRTAP4-2Q9BYR5 136 aa6.04□□□□□ -1.44
SCLT1-209ENST00000511426 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
SCLT1-209ENST00000511426 KRTAP10-7P60409 375 aaPredicted RBP6□□□□□ -1.45
SCLT1-209ENST00000511426 SSPOA2VEC9 5147 aa5.96□□□□□ -1.46
SCLT1-209ENST00000511426 LCE3AQ5TA76 89 aa5.93□□□□□ -1.46
SCLT1-209ENST00000511426 KRTAP8-1Q8IUC2 63 aa5.9□□□□□ -1.47
SCLT1-209ENST00000511426 FSIP2Q5CZC0 6907 aa5.85□□□□□ -1.47
SCLT1-209ENST00000511426 CRCT1Q9UGL9 99 aa5.84□□□□□ -1.47
SCLT1-209ENST00000511426 H3BS24 57 aa5.81□□□□□ -1.48
SCLT1-209ENST00000511426 KRTAP4-11Q9BYQ6 195 aa5.79□□□□□ -1.48
SCLT1-209ENST00000511426 KRTAP12-3P60328 96 aa5.75□□□□□ -1.49
SCLT1-209ENST00000511426 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
SCLT1-209ENST00000511426 FCGBPQ9Y6R7 5405 aaPredicted RBP5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms