RNA–Protein interactions for RNA: ENST00000511116.5

SMAD5-207, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 847 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-207ENST00000511116 SPRR2EP22531 72 aa9.69□□□□□ -0.86
SMAD5-207ENST00000511116 SPRR2BP35325 72 aa9.69□□□□□ -0.86
SMAD5-207ENST00000511116 SPRR2AP35326 72 aa9.69□□□□□ -0.86
SMAD5-207ENST00000511116 SPCS1Q9Y6A9 102 aa9.68□□□□□ -0.86
SMAD5-207ENST00000511116 MT1XP80297 61 aa9.63□□□□□ -0.87
SMAD5-207ENST00000511116 PRO0461Q9UI25 63 aa9.63□□□□□ -0.87
SMAD5-207ENST00000511116 PRO2289Q9P1D8 64 aa9.61□□□□□ -0.87
SMAD5-207ENST00000511116 LCE1AQ5T7P2 110 aa9.57□□□□□ -0.88
SMAD5-207ENST00000511116 LOC101927531A0A1B0GV80 90 aa9.56□□□□□ -0.88
SMAD5-207ENST00000511116 KRTAP2-2Q9BYT5 123 aa9.55□□□□□ -0.88
SMAD5-207ENST00000511116 KRTAP2-1Q9BYU5 128 aa9.55□□□□□ -0.88
SMAD5-207ENST00000511116 TRAV22A0A0B4J277 110 aa9.54□□□□□ -0.88
SMAD5-207ENST00000511116 NDUFC1O43677 76 aa9.54□□□□□ -0.88
SMAD5-207ENST00000511116 KRTAP8-1Q8IUC2 63 aa9.54□□□□□ -0.88
SMAD5-207ENST00000511116 A8MUN3 132 aa9.52□□□□□ -0.89
SMAD5-207ENST00000511116 KRTAP12-2P59991 146 aa9.52□□□□□ -0.89
SMAD5-207ENST00000511116 K7EP34 96 aa9.47□□□□□ -0.89
SMAD5-207ENST00000511116 ADM2Q7Z4H4 148 aa9.47□□□□□ -0.89
SMAD5-207ENST00000511116 PLAC4Q8WY50 150 aa9.41□□□□□ -0.9
SMAD5-207ENST00000511116 SPRR2DP22532 72 aa9.37□□□□□ -0.91
SMAD5-207ENST00000511116 ACYP1P07311 99 aa9.34□□□□□ -0.91
SMAD5-207ENST00000511116 COL5A1-AS1Q5SY13 56 aa9.34□□□□□ -0.91
SMAD5-207ENST00000511116 KRTAP4-8A0A0G2JLE6 195 aa9.33□□□□□ -0.92
SMAD5-207ENST00000511116 KRTAP4-8Q9BYQ9 185 aa9.33□□□□□ -0.92
SMAD5-207ENST00000511116 ATOX1O00244 68 aa9.32□□□□□ -0.92
SMAD5-207ENST00000511116 UQCRQO14949 82 aa9.32□□□□□ -0.92
SMAD5-207ENST00000511116 H0Y9P7 68 aa9.3□□□□□ -0.92
SMAD5-207ENST00000511116 LOC105371267A0A1B0GV96 52 aa9.28□□□□□ -0.92
SMAD5-207ENST00000511116 ETDBQ3ZM63 59 aa9.27□□□□□ -0.93
SMAD5-207ENST00000511116 R4GN34 69 aa9.26□□□□□ -0.93
SMAD5-207ENST00000511116 F8W1H4 67 aa9.25□□□□□ -0.93
SMAD5-207ENST00000511116 P0C880 135 aa9.23□□□□□ -0.93
SMAD5-207ENST00000511116 GTF2H5Q6ZYL4 71 aa9.2□□□□□ -0.94
SMAD5-207ENST00000511116 C20orf197Q8N268 126 aa9.18□□□□□ -0.94
SMAD5-207ENST00000511116 LCE3BQ5TA77 95 aa9.17□□□□□ -0.94
SMAD5-207ENST00000511116 ATP5EP2Q5VTU8 51 aa9.17□□□□□ -0.94
SMAD5-207ENST00000511116 M0QZ58 72 aa9.16□□□□□ -0.94
SMAD5-207ENST00000511116 KRTAP10-12P60413 245 aa9.16□□□□□ -0.94
SMAD5-207ENST00000511116 KRTAP10-7P60409 375 aaPredicted RBP9.15□□□□□ -0.94
SMAD5-207ENST00000511116 HIST1H4AP62805 103 aaKnown RBP9.11□□□□□ -0.95
SMAD5-207ENST00000511116 KRTAP3-2Q9BYR7 98 aa9.11□□□□□ -0.95
SMAD5-207ENST00000511116 LINC00208Q96KT6 92 aa9.1□□□□□ -0.95
SMAD5-207ENST00000511116 FAM240AA0A1B0GVK7 77 aa9.07□□□□□ -0.96
SMAD5-207ENST00000511116 LINC01554Q52M75 96 aa9.01□□□□□ -0.97
SMAD5-207ENST00000511116 OCR1Q9BZK8 76 aa8.98□□□□□ -0.97
SMAD5-207ENST00000511116 MP68P56378 58 aa8.96□□□□□ -0.98
SMAD5-207ENST00000511116 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
SMAD5-207ENST00000511116 LINC00643Q86TS7 51 aa8.87□□□□□ -0.99
SMAD5-207ENST00000511116 GPR98Q8WXG9 6306 aa8.86□□□□□ -0.99
SMAD5-207ENST00000511116 H3BPC8 53 aa8.83□□□□□ -1
SMAD5-207ENST00000511116 DSTQ03001 7570 aaKnown RBP8.76□□□□□ -1.01
SMAD5-207ENST00000511116 TRAV7A0A075B6U4 112 aa8.74□□□□□ -1.01
SMAD5-207ENST00000511116 MT-ATP8P03928 68 aa8.73□□□□□ -1.01
SMAD5-207ENST00000511116 LCE5AQ5TCM9 118 aa8.7□□□□□ -1.02
SMAD5-207ENST00000511116 KRTAP4-9Q9BYQ8 210 aa8.64□□□□□ -1.03
SMAD5-207ENST00000511116 KRTAP19-7Q3SYF9 63 aa8.63□□□□□ -1.03
SMAD5-207ENST00000511116 PCP4L1A6NKN8 68 aa8.62□□□□□ -1.03
SMAD5-207ENST00000511116 ACYP2P14621 99 aa8.59□□□□□ -1.03
SMAD5-207ENST00000511116 KRTAP19-3Q7Z4W3 81 aa8.58□□□□□ -1.04
SMAD5-207ENST00000511116 MT1EP04732 61 aa8.56□□□□□ -1.04
SMAD5-207ENST00000511116 SPTSSBQ8NFR3 76 aa8.56□□□□□ -1.04
SMAD5-207ENST00000511116 SCGB1A1P11684 91 aa8.47□□□□□ -1.05
SMAD5-207ENST00000511116 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
SMAD5-207ENST00000511116 LCE1DQ5T752 114 aa8.43□□□□□ -1.06
SMAD5-207ENST00000511116 CAMK2N1Q7Z7J9 78 aa8.41□□□□□ -1.06
SMAD5-207ENST00000511116 CYSTM1Q9H1C7 97 aa8.38□□□□□ -1.07
SMAD5-207ENST00000511116 HMCN1Q96RW7 5635 aa8.37□□□□□ -1.07
SMAD5-207ENST00000511116 CHKB-CPT1BH3BT56 60 aa8.36□□□□□ -1.07
SMAD5-207ENST00000511116 MT1GP13640 62 aa8.32□□□□□ -1.08
SMAD5-207ENST00000511116 LCE4AQ5TA78 99 aa8.31□□□□□ -1.08
SMAD5-207ENST00000511116 J3QR89 54 aa8.23□□□□□ -1.09
SMAD5-207ENST00000511116 KRTAP19-5Q3LI72 72 aa8.23□□□□□ -1.09
SMAD5-207ENST00000511116 AHNAK2Q8IVF2 5795 aa8.22□□□□□ -1.09
SMAD5-207ENST00000511116 MT4P47944 62 aa8.21□□□□□ -1.1
SMAD5-207ENST00000511116 PP632Q6XCG6 107 aa8.21□□□□□ -1.1
SMAD5-207ENST00000511116 A0A0D9SG42 100 aa8.2□□□□□ -1.1
SMAD5-207ENST00000511116 SMIM20Q8N5G0 67 aa8.2□□□□□ -1.1
SMAD5-207ENST00000511116 MT1MQ8N339 61 aa8.18□□□□□ -1.1
SMAD5-207ENST00000511116 A0A1B0GV90 55 aa8.17□□□□□ -1.1
SMAD5-207ENST00000511116 KRTAP5-4Q6L8H1 288 aa8.13□□□□□ -1.11
SMAD5-207ENST00000511116 SPANXA2-OT1Q8N9U9 137 aa8.13□□□□□ -1.11
SMAD5-207ENST00000511116 KRTAP5-10Q6L8G5 202 aa8.11□□□□□ -1.11
SMAD5-207ENST00000511116 MT1LQ93083 61 aa8.1□□□□□ -1.11
SMAD5-207ENST00000511116 SNURFQ9Y675 71 aa8.07□□□□□ -1.12
SMAD5-207ENST00000511116 KRTAP4-6Q9BYQ5 205 aa7.99□□□□□ -1.13
SMAD5-207ENST00000511116 KRTAP4-3Q9BYR4 195 aa7.97□□□□□ -1.13
SMAD5-207ENST00000511116 KRTAP12-1P59990 96 aa7.95□□□□□ -1.14
SMAD5-207ENST00000511116 SPATA8Q6RVD6 105 aa7.95□□□□□ -1.14
SMAD5-207ENST00000511116 SPINT4Q6UDR6 99 aa7.95□□□□□ -1.14
SMAD5-207ENST00000511116 COA5Q86WW8 74 aa7.88□□□□□ -1.15
SMAD5-207ENST00000511116 SERP1Q9Y6X1 66 aa7.88□□□□□ -1.15
SMAD5-207ENST00000511116 SEC61GP60059 68 aa7.87□□□□□ -1.15
SMAD5-207ENST00000511116 KRTAP5-7Q6L8G8 165 aa7.86□□□□□ -1.15
SMAD5-207ENST00000511116 A0A1B0GU33 70 aa7.84□□□□□ -1.15
SMAD5-207ENST00000511116 C10orf95Q9H7T3 257 aa7.84□□□□□ -1.15
SMAD5-207ENST00000511116 LCE3AQ5TA76 89 aa7.81□□□□□ -1.16
SMAD5-207ENST00000511116 KRTAP5-3Q6L8H2 238 aa7.79□□□□□ -1.16
SMAD5-207ENST00000511116 SERP2Q8N6R1 65 aa7.76□□□□□ -1.17
SMAD5-207ENST00000511116 K7ERU9 68 aa7.7□□□□□ -1.18
SMAD5-207ENST00000511116 TNP1P09430 55 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms