RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 MT1HL1P0DM35 61 aa6.89□□□□□ -1.31
PRDM16-205ENST00000509860 TP53AIP1Q9HCN2 124 aa6.89□□□□□ -1.31
PRDM16-205ENST00000509860 BIRC6Q9NR09 4857 aa6.88□□□□□ -1.31
PRDM16-205ENST00000509860 C9orf92A6NGG3 77 aa6.88□□□□□ -1.31
PRDM16-205ENST00000509860 P0C880 135 aa6.87□□□□□ -1.31
PRDM16-205ENST00000509860 A0A1B0GU69 56 aa6.86□□□□□ -1.31
PRDM16-205ENST00000509860 CRIPTQ9P021 101 aa6.86□□□□□ -1.31
PRDM16-205ENST00000509860 LPAP08519 4548 aa6.82□□□□□ -1.32
PRDM16-205ENST00000509860 SPATA8Q6RVD6 105 aa6.8□□□□□ -1.32
PRDM16-205ENST00000509860 UQCR11O14957 56 aa6.78□□□□□ -1.32
PRDM16-205ENST00000509860 NDUFAF8A1L188 74 aa6.77□□□□□ -1.33
PRDM16-205ENST00000509860 KRTAP25-1Q3LHN0 102 aa6.77□□□□□ -1.33
PRDM16-205ENST00000509860 C20orf166-AS1Q96NR2 134 aa6.75□□□□□ -1.33
PRDM16-205ENST00000509860 A8MUU9 505 aa6.74□□□□□ -1.33
PRDM16-205ENST00000509860 LRP2P98164 4655 aa6.72□□□□□ -1.33
PRDM16-205ENST00000509860 PCLOQ9Y6V0 5065 aa6.71□□□□□ -1.34
PRDM16-205ENST00000509860 SPINT4Q6UDR6 99 aa6.69□□□□□ -1.34
PRDM16-205ENST00000509860 ACYP2P14621 99 aa6.68□□□□□ -1.34
PRDM16-205ENST00000509860 XP32Q5T750 250 aa6.62□□□□□ -1.35
PRDM16-205ENST00000509860 DMAC1Q96GE9 116 aa6.58□□□□□ -1.36
PRDM16-205ENST00000509860 HERC1Q15751 4861 aa6.57□□□□□ -1.36
PRDM16-205ENST00000509860 RPL37P61927 97 aaKnown RBP6.55□□□□□ -1.36
PRDM16-205ENST00000509860 MUC17Q685J3 4493 aa6.55□□□□□ -1.36
PRDM16-205ENST00000509860 KRTAP3-1Q9BYR8 98 aa6.55□□□□□ -1.36
PRDM16-205ENST00000509860 LUZP6Q538Z0 58 aa6.54□□□□□ -1.36
PRDM16-205ENST00000509860 HMCN2Q8NDA2 5059 aa6.49□□□□□ -1.37
PRDM16-205ENST00000509860 TPRXLQ17RH7 258 aa6.49□□□□□ -1.37
PRDM16-205ENST00000509860 A0A0D9SG42 100 aa6.49□□□□□ -1.37
PRDM16-205ENST00000509860 K7ERS5 55 aa6.41□□□□□ -1.38
PRDM16-205ENST00000509860 MUC2Q02817 5179 aa6.4□□□□□ -1.38
PRDM16-205ENST00000509860 H0YAA0 97 aa6.38□□□□□ -1.39
PRDM16-205ENST00000509860 J3QL48 77 aa6.35□□□□□ -1.39
PRDM16-205ENST00000509860 COX6B2Q6YFQ2 88 aa6.35□□□□□ -1.39
PRDM16-205ENST00000509860 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
PRDM16-205ENST00000509860 C10orf95Q9H7T3 257 aa6.32□□□□□ -1.4
PRDM16-205ENST00000509860 KRTAP15-1Q3LI76 137 aa6.32□□□□□ -1.4
PRDM16-205ENST00000509860 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
PRDM16-205ENST00000509860 A0A1B0GU33 70 aa6.26□□□□□ -1.41
PRDM16-205ENST00000509860 KRTAP19-2Q3LHN2 52 aa6.24□□□□□ -1.41
PRDM16-205ENST00000509860 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
PRDM16-205ENST00000509860 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.42
PRDM16-205ENST00000509860 SEC61BP60468 96 aaKnown RBP6.21□□□□□ -1.42
PRDM16-205ENST00000509860 RNF213Q63HN8 5207 aa6.14□□□□□ -1.43
PRDM16-205ENST00000509860 H1FX-AS1Q4G0G2 97 aa6.14□□□□□ -1.43
PRDM16-205ENST00000509860 S4R3F8 94 aa6.13□□□□□ -1.43
PRDM16-205ENST00000509860 KRTAP3-2Q9BYR7 98 aa6.11□□□□□ -1.43
PRDM16-205ENST00000509860 FAT4Q6V0I7 4981 aa6.1□□□□□ -1.43
PRDM16-205ENST00000509860 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.43
PRDM16-205ENST00000509860 KRTAP13-4Q3LI77 160 aa5.99□□□□□ -1.45
PRDM16-205ENST00000509860 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
PRDM16-205ENST00000509860 LORP23490 312 aaPredicted RBP5.87□□□□□ -1.47
PRDM16-205ENST00000509860 M0QZ58 72 aa5.86□□□□□ -1.47
PRDM16-205ENST00000509860 R4GN34 69 aa5.82□□□□□ -1.48
PRDM16-205ENST00000509860 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
PRDM16-205ENST00000509860 MT1HP80294 61 aa5.78□□□□□ -1.48
PRDM16-205ENST00000509860 CAMK2N1Q7Z7J9 78 aa5.77□□□□□ -1.49
PRDM16-205ENST00000509860 PLAC4Q8WY50 150 aa5.75□□□□□ -1.49
PRDM16-205ENST00000509860 KRTAP12-1P59990 96 aa5.68□□□□□ -1.5
PRDM16-205ENST00000509860 M0R2T5 61 aa5.67□□□□□ -1.5
PRDM16-205ENST00000509860 KRTAP9-8Q9BYQ0 159 aa5.63□□□□□ -1.51
PRDM16-205ENST00000509860 MT1FP04733 61 aa5.59□□□□□ -1.52
PRDM16-205ENST00000509860 MT2AP02795 61 aa5.58□□□□□ -1.52
PRDM16-205ENST00000509860 KRTAP19-1Q8IUB9 90 aa5.55□□□□□ -1.52
PRDM16-205ENST00000509860 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
PRDM16-205ENST00000509860 LCE2AQ5TA79 106 aaPredicted RBP5.48□□□□□ -1.53
PRDM16-205ENST00000509860 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
PRDM16-205ENST00000509860 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
PRDM16-205ENST00000509860 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.54
PRDM16-205ENST00000509860 KRTAP19-8Q3LI54 63 aa5.34□□□□□ -1.56
PRDM16-205ENST00000509860 MT1BP07438 61 aa5.33□□□□□ -1.56
PRDM16-205ENST00000509860 USH2AO75445 5202 aa5.3□□□□□ -1.56
PRDM16-205ENST00000509860 LCE2BO14633 110 aa5.26□□□□□ -1.57
PRDM16-205ENST00000509860 KRTAP10-5P60370 271 aa5.19□□□□□ -1.58
PRDM16-205ENST00000509860 MT1XP80297 61 aa5.19□□□□□ -1.58
PRDM16-205ENST00000509860 TNP1P09430 55 aa5.17□□□□□ -1.58
PRDM16-205ENST00000509860 FSIP2Q5CZC0 6907 aa5.13□□□□□ -1.59
PRDM16-205ENST00000509860 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
PRDM16-205ENST00000509860 INE1O15225 51 aa5.06□□□□□ -1.6
PRDM16-205ENST00000509860 PP632Q6XCG6 107 aa5.03□□□□□ -1.6
PRDM16-205ENST00000509860 KRTAP10-7P60409 375 aaPredicted RBP5□□□□□ -1.61
PRDM16-205ENST00000509860 KMT2DO14686 5537 aa5□□□□□ -1.61
PRDM16-205ENST00000509860 LCE3AQ5TA76 89 aa4.95□□□□□ -1.62
PRDM16-205ENST00000509860 KRTAP23-1A1A580 65 aa4.93□□□□□ -1.62
PRDM16-205ENST00000509860 SPRR5A0A1B0GTR4 108 aa4.92□□□□□ -1.62
PRDM16-205ENST00000509860 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
PRDM16-205ENST00000509860 LCE2DQ5TA82 110 aaPredicted RBP4.83□□□□□ -1.64
PRDM16-205ENST00000509860 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
PRDM16-205ENST00000509860 KRTAP8-1Q8IUC2 63 aa4.81□□□□□ -1.64
PRDM16-205ENST00000509860 KRTAP4-8A0A0G2JLE6 195 aa4.79□□□□□ -1.64
PRDM16-205ENST00000509860 KRTAP4-8Q9BYQ9 185 aa4.79□□□□□ -1.64
PRDM16-205ENST00000509860 FCGBPQ9Y6R7 5405 aaPredicted RBP4.77□□□□□ -1.65
PRDM16-205ENST00000509860 OBSCNQ5VST9 7968 aa4.72□□□□□ -1.65
PRDM16-205ENST00000509860 KRTAP19-5Q3LI72 72 aa4.68□□□□□ -1.66
PRDM16-205ENST00000509860 KRTAP12-3P60328 96 aa4.67□□□□□ -1.66
PRDM16-205ENST00000509860 KRTAP19-7Q3SYF9 63 aa4.64□□□□□ -1.67
PRDM16-205ENST00000509860 DSTQ03001 7570 aaKnown RBP4.6□□□□□ -1.67
PRDM16-205ENST00000509860 KRTAP9-2Q9BYQ4 174 aa4.59□□□□□ -1.67
PRDM16-205ENST00000509860 MACF1Q9UPN3 7388 aaKnown RBP4.55□□□□□ -1.68
PRDM16-205ENST00000509860 CRCT1Q9UGL9 99 aa4.52□□□□□ -1.69
PRDM16-205ENST00000509860 MT1EP04732 61 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms