RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 KRTAP9-7A8MTY7 169 aa8.68□□□□□ -1.02
UBE3D-207ENST00000509102 CSAG1Q6PB30 78 aa8.68□□□□□ -1.02
UBE3D-207ENST00000509102 TRAV22A0A0B4J277 110 aa8.66□□□□□ -1.02
UBE3D-207ENST00000509102 KRTAP3-1Q9BYR8 98 aa8.66□□□□□ -1.02
UBE3D-207ENST00000509102 KRTAP19-6Q3LI70 58 aa8.65□□□□□ -1.02
UBE3D-207ENST00000509102 HIST1H4AP62805 103 aaKnown RBP8.64□□□□□ -1.03
UBE3D-207ENST00000509102 LOC101927531A0A1B0GV80 90 aa8.63□□□□□ -1.03
UBE3D-207ENST00000509102 CYP4F30PQ9H0H9 118 aa8.63□□□□□ -1.03
UBE3D-207ENST00000509102 LCA10Q71F78 164 aa8.62□□□□□ -1.03
UBE3D-207ENST00000509102 UQCRQO14949 82 aa8.57□□□□□ -1.04
UBE3D-207ENST00000509102 ATOX1O00244 68 aa8.56□□□□□ -1.04
UBE3D-207ENST00000509102 LCE5AQ5TCM9 118 aa8.54□□□□□ -1.04
UBE3D-207ENST00000509102 LINC00643Q86TS7 51 aa8.53□□□□□ -1.04
UBE3D-207ENST00000509102 H0Y9P7 68 aa8.52□□□□□ -1.05
UBE3D-207ENST00000509102 A0A087WVE0 104 aa8.45□□□□□ -1.06
UBE3D-207ENST00000509102 MACF1Q9UPN3 7388 aaKnown RBP8.44□□□□□ -1.06
UBE3D-207ENST00000509102 KLKP1Q107X0 134 aa8.43□□□□□ -1.06
UBE3D-207ENST00000509102 Q5VV11 94 aa8.43□□□□□ -1.06
UBE3D-207ENST00000509102 NDUFC1O43677 76 aa8.41□□□□□ -1.06
UBE3D-207ENST00000509102 SPRR2GQ9BYE4 73 aa8.41□□□□□ -1.06
UBE3D-207ENST00000509102 A0A1B0GV90 55 aa8.4□□□□□ -1.06
UBE3D-207ENST00000509102 MP68P56378 58 aa8.4□□□□□ -1.06
UBE3D-207ENST00000509102 A8MUN3 132 aa8.39□□□□□ -1.07
UBE3D-207ENST00000509102 J3QR89 54 aa8.38□□□□□ -1.07
UBE3D-207ENST00000509102 LINC00208Q96KT6 92 aa8.38□□□□□ -1.07
UBE3D-207ENST00000509102 IMUPQ9GZP8 106 aa8.38□□□□□ -1.07
UBE3D-207ENST00000509102 CRIPTQ9P021 101 aa8.37□□□□□ -1.07
UBE3D-207ENST00000509102 KRTAP19-8Q3LI54 63 aa8.34□□□□□ -1.07
UBE3D-207ENST00000509102 A6NN06 94 aa8.33□□□□□ -1.08
UBE3D-207ENST00000509102 MT1BP07438 61 aa8.31□□□□□ -1.08
UBE3D-207ENST00000509102 OCR1Q9BZK8 76 aa8.31□□□□□ -1.08
UBE3D-207ENST00000509102 SYNE2Q8WXH0 6885 aaKnown RBP8.31□□□□□ -1.08
UBE3D-207ENST00000509102 H0YAA0 97 aa8.28□□□□□ -1.08
UBE3D-207ENST00000509102 SCGB1A1P11684 91 aa8.26□□□□□ -1.09
UBE3D-207ENST00000509102 H3BPC8 53 aa8.25□□□□□ -1.09
UBE3D-207ENST00000509102 KRTAP6-3Q3LI67 103 aa8.23□□□□□ -1.09
UBE3D-207ENST00000509102 ADM2Q7Z4H4 148 aa8.19□□□□□ -1.1
UBE3D-207ENST00000509102 KRTAP10-5P60370 271 aa8.17□□□□□ -1.1
UBE3D-207ENST00000509102 C20orf197Q8N268 126 aa8.1□□□□□ -1.11
UBE3D-207ENST00000509102 DMAC1Q96GE9 116 aa8.1□□□□□ -1.11
UBE3D-207ENST00000509102 KRTAP5-3Q6L8H2 238 aa8.09□□□□□ -1.11
UBE3D-207ENST00000509102 R4GN34 69 aa8.04□□□□□ -1.12
UBE3D-207ENST00000509102 SMIM20Q8N5G0 67 aa8.03□□□□□ -1.12
UBE3D-207ENST00000509102 K7ERU9 68 aa8.02□□□□□ -1.13
UBE3D-207ENST00000509102 PLAC4Q8WY50 150 aa7.99□□□□□ -1.13
UBE3D-207ENST00000509102 PRO2289Q9P1D8 64 aa7.99□□□□□ -1.13
UBE3D-207ENST00000509102 TRAV7A0A075B6U4 112 aa7.97□□□□□ -1.13
UBE3D-207ENST00000509102 MT-ATP8P03928 68 aa7.96□□□□□ -1.14
UBE3D-207ENST00000509102 ACYP2P14621 99 aa7.96□□□□□ -1.14
UBE3D-207ENST00000509102 P0C880 135 aa7.95□□□□□ -1.14
UBE3D-207ENST00000509102 M0QZ58 72 aa7.94□□□□□ -1.14
UBE3D-207ENST00000509102 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
UBE3D-207ENST00000509102 CHKB-CPT1BH3BT56 60 aa7.85□□□□□ -1.15
UBE3D-207ENST00000509102 LINC01554Q52M75 96 aa7.84□□□□□ -1.15
UBE3D-207ENST00000509102 MUC12Q9UKN1 5478 aa7.84□□□□□ -1.15
UBE3D-207ENST00000509102 KRTAP5-9P26371 169 aa7.83□□□□□ -1.16
UBE3D-207ENST00000509102 MT1XP80297 61 aa7.81□□□□□ -1.16
UBE3D-207ENST00000509102 NEBP20929 6669 aa7.81□□□□□ -1.16
UBE3D-207ENST00000509102 SNURFQ9Y675 71 aa7.78□□□□□ -1.16
UBE3D-207ENST00000509102 KMT2DO14686 5537 aa7.73□□□□□ -1.17
UBE3D-207ENST00000509102 SPANXA2-OT1Q8N9U9 137 aa7.71□□□□□ -1.18
UBE3D-207ENST00000509102 SERP2Q8N6R1 65 aa7.69□□□□□ -1.18
UBE3D-207ENST00000509102 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
UBE3D-207ENST00000509102 MDN1Q9NU22 5596 aa7.65□□□□□ -1.18
UBE3D-207ENST00000509102 KRTAP8-1Q8IUC2 63 aa7.65□□□□□ -1.18
UBE3D-207ENST00000509102 SPRR2FQ96RM1 72 aa7.65□□□□□ -1.18
UBE3D-207ENST00000509102 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
UBE3D-207ENST00000509102 SPRR2EP22531 72 aa7.54□□□□□ -1.2
UBE3D-207ENST00000509102 SPRR2BP35325 72 aa7.54□□□□□ -1.2
UBE3D-207ENST00000509102 SPRR2AP35326 72 aa7.54□□□□□ -1.2
UBE3D-207ENST00000509102 COA5Q86WW8 74 aa7.48□□□□□ -1.21
UBE3D-207ENST00000509102 SEC61GP60059 68 aa7.47□□□□□ -1.21
UBE3D-207ENST00000509102 KRTAP10-7P60409 375 aaPredicted RBP7.45□□□□□ -1.22
UBE3D-207ENST00000509102 KRTAP2-3P0C7H8 128 aa7.44□□□□□ -1.22
UBE3D-207ENST00000509102 COX7CP15954 63 aa7.44□□□□□ -1.22
UBE3D-207ENST00000509102 KRTAP2-4Q9BYR9 128 aa7.44□□□□□ -1.22
UBE3D-207ENST00000509102 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
UBE3D-207ENST00000509102 SERP1Q9Y6X1 66 aa7.43□□□□□ -1.22
UBE3D-207ENST00000509102 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
UBE3D-207ENST00000509102 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
UBE3D-207ENST00000509102 LCE1AQ5T7P2 110 aa7.39□□□□□ -1.23
UBE3D-207ENST00000509102 KRTAP23-1A1A580 65 aa7.32□□□□□ -1.24
UBE3D-207ENST00000509102 H7BZZ5 65 aa7.3□□□□□ -1.24
UBE3D-207ENST00000509102 SPRR2DP22532 72 aa7.3□□□□□ -1.24
UBE3D-207ENST00000509102 A0A0D9SG42 100 aa7.26□□□□□ -1.25
UBE3D-207ENST00000509102 A0A1B0GU33 70 aa7.25□□□□□ -1.25
UBE3D-207ENST00000509102 CYSTM1Q9H1C7 97 aa7.22□□□□□ -1.25
UBE3D-207ENST00000509102 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
UBE3D-207ENST00000509102 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
UBE3D-207ENST00000509102 KRTAP2-1Q9BYU5 128 aa7.21□□□□□ -1.26
UBE3D-207ENST00000509102 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
UBE3D-207ENST00000509102 ANAPC13Q9BS18 74 aa7.2□□□□□ -1.26
UBE3D-207ENST00000509102 SPINT4Q6UDR6 99 aa7.19□□□□□ -1.26
UBE3D-207ENST00000509102 A0A1B0GU69 56 aa7.16□□□□□ -1.26
UBE3D-207ENST00000509102 SMIM26A0A096LP01 95 aa7.09□□□□□ -1.27
UBE3D-207ENST00000509102 KRTAP12-1P59990 96 aa7.06□□□□□ -1.28
UBE3D-207ENST00000509102 ATP5EP56381 51 aaPredicted RBP7.02□□□□□ -1.29
UBE3D-207ENST00000509102 PRR15LQ9BU68 103 aa7□□□□□ -1.29
UBE3D-207ENST00000509102 CCDC179H3BU77 68 aa6.99□□□□□ -1.29
UBE3D-207ENST00000509102 KRTAP19-7Q3SYF9 63 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms