RNA–Protein interactions for RNA: ENST00000507292.1

SRPK1-208, Transcript of SRSF protein kinase 1, humanhuman

TSL 3

Gene SRPK1, Length 634 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-208ENST00000507292 MAST4O15021 2626 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 SPRR1BP22528 89 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 CNBPP62633 177 aaKnown RBP0.81□□□□□ -2.28
SRPK1-208ENST00000507292 C1orf137Q5JT78 98 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 LCA10Q71F78 164 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 LIMD2Q9BT23 127 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 CDC42SE1Q9NRR8 79 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 ACACBO00763 2458 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 NBEAL1Q6ZS30 2694 aa0.81□□□□□ -2.28
SRPK1-208ENST00000507292 SONP18583 2426 aaKnown RBP0.8□□□□□ -2.28
SRPK1-208ENST00000507292 MTORP42345 2549 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 LRP1BQ9NZR2 4599 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 FLNBO75369 2602 aaKnown RBP0.8□□□□□ -2.28
SRPK1-208ENST00000507292 HYDINQ4G0P3 5121 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 MMP24-AS1A0A0U1RRL7 71 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 DEFB130BP0DP73 79 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 DEFB130AP0DP74 79 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 DEFB113Q30KQ7 82 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 LINC01556Q5JQF7 62 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 ATP11AUNQ6ZP68 121 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 WFDC10BQ8IUB3 73 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 LINC00472Q9H8W2 130 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 LINC01558Q9Y6Z2 57 aa0.8□□□□□ -2.28
SRPK1-208ENST00000507292 HELZ2Q9BYK8 2649 aaKnown RBP0.8□□□□□ -2.28
SRPK1-208ENST00000507292 DYNC1H1Q14204 4646 aaKnown RBP0.79□□□□□ -2.28
SRPK1-208ENST00000507292 H0Y9P7 68 aa0.79□□□□□ -2.28
SRPK1-208ENST00000507292 DEFB135Q30KP9 77 aa0.79□□□□□ -2.28
SRPK1-208ENST00000507292 Q96NJ1 140 aa0.79□□□□□ -2.28
SRPK1-208ENST00000507292 FAM208BQ5VWN6 2430 aa0.79□□□□□ -2.28
SRPK1-208ENST00000507292 DNHD1Q96M86 4753 aa0.79□□□□□ -2.28
SRPK1-208ENST00000507292 ATRQ13535 2644 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 A0A087WSZ3 146 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 DEFB131BA0A096LNP1 70 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 CHKB-CPT1BH3BT56 60 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 DEFB4AO15263 64 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 SPART-AS1P0CW21 52 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 SPINK7P58062 85 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 CASC2Q6XLA1 102 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 RETNLBQ9BQ08 111 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 FAT1Q14517 4588 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 STAB2Q8WWQ8 2551 aa0.78□□□□□ -2.28
SRPK1-208ENST00000507292 FAT3Q8TDW7 4589 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 ACANP16112 2415 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 MYCBP2O75592 4640 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 TGP01266 2768 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 RPL37AP61513 92 aaKnown RBP0.77□□□□□ -2.29
SRPK1-208ENST00000507292 WFDC13Q8IUB5 93 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 DEFB105AQ8NG35 78 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 DMAC1Q96GE9 116 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 TP53AIP1Q9HCN2 124 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 LRP1Q07954 4544 aaKnown RBP0.77□□□□□ -2.29
SRPK1-208ENST00000507292 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
SRPK1-208ENST00000507292 A0A096LNI7 61 aa0.76□□□□□ -2.29
SRPK1-208ENST00000507292 HTN3P15516 51 aa0.76□□□□□ -2.29
SRPK1-208ENST00000507292 PRLHP81277 87 aa0.76□□□□□ -2.29
SRPK1-208ENST00000507292 SPATA8Q6RVD6 105 aa0.76□□□□□ -2.29
SRPK1-208ENST00000507292 FASNP49327 2511 aaKnown RBP0.76□□□□□ -2.29
SRPK1-208ENST00000507292 FLGP20930 4061 aaPredicted RBP0.76□□□□□ -2.29
SRPK1-208ENST00000507292 F8P00451 2351 aa0.76□□□□□ -2.29
SRPK1-208ENST00000507292 RYR2Q92736 4967 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 COL6A5A8TX70 2615 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 AHNAK2Q8IVF2 5795 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 STAB1Q9NY15 2570 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 LINC01554Q52M75 96 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 SPAG11AQ6PDA7 123 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
SRPK1-208ENST00000507292 MRPL34Q9BQ48 92 aaKnown RBP0.75□□□□□ -2.29
SRPK1-208ENST00000507292 K7EIL1 84 aa0.74□□□□□ -2.29
SRPK1-208ENST00000507292 RYR1P21817 5038 aa0.73□□□□□ -2.29
SRPK1-208ENST00000507292 H0YAA0 97 aa0.73□□□□□ -2.29
SRPK1-208ENST00000507292 ACYP2P14621 99 aa0.73□□□□□ -2.29
SRPK1-208ENST00000507292 MIR22HGQ0VDD5 57 aa0.73□□□□□ -2.29
SRPK1-208ENST00000507292 SMR3AQ99954 134 aa0.73□□□□□ -2.29
SRPK1-208ENST00000507292 RYR3Q15413 4870 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 A0A1B0GU69 56 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 UQCR11O14957 56 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 LY6G6CO95867 125 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 CSAG1Q6PB30 78 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 APLNQ9ULZ1 77 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 HERC1Q15751 4861 aa0.72□□□□□ -2.29
SRPK1-208ENST00000507292 KMT2CQ8NEZ4 4911 aaKnown RBP0.71□□□□□ -2.3
SRPK1-208ENST00000507292 NBDYA0A0U1RRE5 68 aa0.71□□□□□ -2.3
SRPK1-208ENST00000507292 ROMO1P60602 79 aa0.71□□□□□ -2.3
SRPK1-208ENST00000507292 SSBP3-AS1Q7Z2R9 100 aa0.71□□□□□ -2.3
SRPK1-208ENST00000507292 MGAM2Q2M2H8 2515 aa0.71□□□□□ -2.3
SRPK1-208ENST00000507292 A0A087WTM6 91 aa0.7□□□□□ -2.3
SRPK1-208ENST00000507292 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
SRPK1-208ENST00000507292 MUC17Q685J3 4493 aa0.7□□□□□ -2.3
SRPK1-208ENST00000507292 RPS29P62273 56 aaKnown RBP0.69□□□□□ -2.3
SRPK1-208ENST00000507292 H1FX-AS1Q4G0G2 97 aa0.69□□□□□ -2.3
SRPK1-208ENST00000507292 C1orf134Q5TEV5 83 aa0.69□□□□□ -2.3
SRPK1-208ENST00000507292 NUPR2A6NF83 97 aa0.68□□□□□ -2.3
SRPK1-208ENST00000507292 KRTAP10-4P60372 401 aaPredicted RBP0.68□□□□□ -2.3
SRPK1-208ENST00000507292 SPINK6Q6UWN8 80 aa0.68□□□□□ -2.3
SRPK1-208ENST00000507292 ABCA13Q86UQ4 5058 aa0.68□□□□□ -2.3
SRPK1-208ENST00000507292 FLG2Q5D862 2391 aaPredicted RBP0.67□□□□□ -2.3
SRPK1-208ENST00000507292 LPAP08519 4548 aa0.67□□□□□ -2.3
SRPK1-208ENST00000507292 INE1O15225 51 aa0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms