RNA–Protein interactions for RNA: ENST00000506267.1

HMGB2-204, Transcript of high mobility group box 2, humanhuman

TSL 3

Gene HMGB2, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-204ENST00000506267 LINC00208Q96KT6 92 aa10.16□□□□□ -0.78
HMGB2-204ENST00000506267 SPRR2GQ9BYE4 73 aa10.16□□□□□ -0.78
HMGB2-204ENST00000506267 KLKP1Q107X0 134 aa10.15□□□□□ -0.78
HMGB2-204ENST00000506267 MACF1Q9UPN3 7388 aaKnown RBP10.15□□□□□ -0.79
HMGB2-204ENST00000506267 MT1BP07438 61 aa10.1□□□□□ -0.79
HMGB2-204ENST00000506267 KRTAP19-8Q3LI54 63 aa10.1□□□□□ -0.79
HMGB2-204ENST00000506267 MP68P56378 58 aa10.09□□□□□ -0.79
HMGB2-204ENST00000506267 A8MUN3 132 aa10.07□□□□□ -0.8
HMGB2-204ENST00000506267 NDUFC1O43677 76 aa10.04□□□□□ -0.8
HMGB2-204ENST00000506267 Q5VV11 94 aa10.02□□□□□ -0.81
HMGB2-204ENST00000506267 IMUPQ9GZP8 106 aa10.01□□□□□ -0.81
HMGB2-204ENST00000506267 SYNE2Q8WXH0 6885 aaKnown RBP10.01□□□□□ -0.81
HMGB2-204ENST00000506267 H0YAA0 97 aa9.99□□□□□ -0.81
HMGB2-204ENST00000506267 H3BPC8 53 aa9.99□□□□□ -0.81
HMGB2-204ENST00000506267 CRIPTQ9P021 101 aa9.97□□□□□ -0.81
HMGB2-204ENST00000506267 SCGB1A1P11684 91 aa9.94□□□□□ -0.82
HMGB2-204ENST00000506267 MT-ATP8P03928 68 aa9.89□□□□□ -0.83
HMGB2-204ENST00000506267 A6NN06 94 aa9.87□□□□□ -0.83
HMGB2-204ENST00000506267 DMAC1Q96GE9 116 aa9.86□□□□□ -0.83
HMGB2-204ENST00000506267 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
HMGB2-204ENST00000506267 K7ERU9 68 aa9.83□□□□□ -0.84
HMGB2-204ENST00000506267 KRTAP10-5P60370 271 aa9.83□□□□□ -0.84
HMGB2-204ENST00000506267 KRTAP6-3Q3LI67 103 aa9.78□□□□□ -0.84
HMGB2-204ENST00000506267 TRAV7A0A075B6U4 112 aa9.74□□□□□ -0.85
HMGB2-204ENST00000506267 SMIM20Q8N5G0 67 aa9.71□□□□□ -0.86
HMGB2-204ENST00000506267 P0C880 135 aa9.68□□□□□ -0.86
HMGB2-204ENST00000506267 KRTAP3-2Q9BYR7 98 aa9.66□□□□□ -0.86
HMGB2-204ENST00000506267 ACYP2P14621 99 aa9.59□□□□□ -0.87
HMGB2-204ENST00000506267 C20orf197Q8N268 126 aa9.58□□□□□ -0.88
HMGB2-204ENST00000506267 R4GN34 69 aa9.56□□□□□ -0.88
HMGB2-204ENST00000506267 SNURFQ9Y675 71 aa9.53□□□□□ -0.88
HMGB2-204ENST00000506267 M0QZ58 72 aa9.5□□□□□ -0.89
HMGB2-204ENST00000506267 MT1XP80297 61 aa9.49□□□□□ -0.89
HMGB2-204ENST00000506267 MUC12Q9UKN1 5478 aa9.46□□□□□ -0.89
HMGB2-204ENST00000506267 PLAC4Q8WY50 150 aa9.46□□□□□ -0.9
HMGB2-204ENST00000506267 SERP2Q8N6R1 65 aa9.44□□□□□ -0.9
HMGB2-204ENST00000506267 NEBP20929 6669 aa9.43□□□□□ -0.9
HMGB2-204ENST00000506267 SPANXA2-OT1Q8N9U9 137 aa9.41□□□□□ -0.9
HMGB2-204ENST00000506267 SPTSSBQ8NFR3 76 aa9.41□□□□□ -0.9
HMGB2-204ENST00000506267 KRTAP5-9P26371 169 aa9.4□□□□□ -0.9
HMGB2-204ENST00000506267 PRO2289Q9P1D8 64 aa9.4□□□□□ -0.9
HMGB2-204ENST00000506267 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
HMGB2-204ENST00000506267 LINC01554Q52M75 96 aa9.34□□□□□ -0.91
HMGB2-204ENST00000506267 KMT2DO14686 5537 aa9.34□□□□□ -0.91
HMGB2-204ENST00000506267 KRTAP12-2P59991 146 aa9.22□□□□□ -0.93
HMGB2-204ENST00000506267 MDN1Q9NU22 5596 aa9.22□□□□□ -0.93
HMGB2-204ENST00000506267 COX7CP15954 63 aa9.17□□□□□ -0.94
HMGB2-204ENST00000506267 COA5Q86WW8 74 aa9.13□□□□□ -0.95
HMGB2-204ENST00000506267 KRTAP13-4Q3LI77 160 aa9.11□□□□□ -0.95
HMGB2-204ENST00000506267 SPRR2FQ96RM1 72 aa9.08□□□□□ -0.96
HMGB2-204ENST00000506267 CYSTM1Q9H1C7 97 aa9.08□□□□□ -0.96
HMGB2-204ENST00000506267 KRTAP8-1Q8IUC2 63 aa9.07□□□□□ -0.96
HMGB2-204ENST00000506267 KRTAP4-8A0A0G2JLE6 195 aa9.05□□□□□ -0.96
HMGB2-204ENST00000506267 H7BZZ5 65 aa9.05□□□□□ -0.96
HMGB2-204ENST00000506267 KRTAP10-7P60409 375 aaPredicted RBP9.05□□□□□ -0.96
HMGB2-204ENST00000506267 KRTAP4-8Q9BYQ9 185 aa9.05□□□□□ -0.96
HMGB2-204ENST00000506267 KRTAP10-12P60413 245 aa9.01□□□□□ -0.97
HMGB2-204ENST00000506267 KRTAP20-1Q3LI63 56 aa8.97□□□□□ -0.97
HMGB2-204ENST00000506267 SPRR2EP22531 72 aa8.92□□□□□ -0.98
HMGB2-204ENST00000506267 SPRR2BP35325 72 aa8.92□□□□□ -0.98
HMGB2-204ENST00000506267 SPRR2AP35326 72 aa8.92□□□□□ -0.98
HMGB2-204ENST00000506267 LCE1AQ5T7P2 110 aa8.87□□□□□ -0.99
HMGB2-204ENST00000506267 SEC61GP60059 68 aa8.86□□□□□ -0.99
HMGB2-204ENST00000506267 SERP1Q9Y6X1 66 aa8.86□□□□□ -0.99
HMGB2-204ENST00000506267 ANAPC13Q9BS18 74 aa8.84□□□□□ -0.99
HMGB2-204ENST00000506267 KRTAP2-3P0C7H8 128 aa8.78□□□□□ -1
HMGB2-204ENST00000506267 SPATA8Q6RVD6 105 aa8.78□□□□□ -1
HMGB2-204ENST00000506267 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
HMGB2-204ENST00000506267 KRTAP2-4Q9BYR9 128 aa8.78□□□□□ -1
HMGB2-204ENST00000506267 A0A1B0GU33 70 aa8.77□□□□□ -1.01
HMGB2-204ENST00000506267 A0A0D9SG42 100 aa8.75□□□□□ -1.01
HMGB2-204ENST00000506267 CCDC179H3BU77 68 aa8.73□□□□□ -1.01
HMGB2-204ENST00000506267 KRTAP12-1P59990 96 aa8.64□□□□□ -1.03
HMGB2-204ENST00000506267 A0A1B0GU69 56 aa8.62□□□□□ -1.03
HMGB2-204ENST00000506267 SPRR2DP22532 72 aa8.62□□□□□ -1.03
HMGB2-204ENST00000506267 SPINT4Q6UDR6 99 aa8.61□□□□□ -1.03
HMGB2-204ENST00000506267 ATP5EP56381 51 aaPredicted RBP8.54□□□□□ -1.04
HMGB2-204ENST00000506267 KRTAP2-2Q9BYT5 123 aa8.51□□□□□ -1.05
HMGB2-204ENST00000506267 KRTAP2-1Q9BYU5 128 aa8.51□□□□□ -1.05
HMGB2-204ENST00000506267 SMIM26A0A096LP01 95 aa8.49□□□□□ -1.05
HMGB2-204ENST00000506267 KRTAP19-7Q3SYF9 63 aa8.49□□□□□ -1.05
HMGB2-204ENST00000506267 A8MU10 97 aa8.48□□□□□ -1.05
HMGB2-204ENST00000506267 MT1EP04732 61 aa8.39□□□□□ -1.07
HMGB2-204ENST00000506267 LCE3BQ5TA77 95 aa8.39□□□□□ -1.07
HMGB2-204ENST00000506267 LINC01558Q9Y6Z2 57 aa8.39□□□□□ -1.07
HMGB2-204ENST00000506267 TMEM258P61165 79 aa8.36□□□□□ -1.07
HMGB2-204ENST00000506267 PRR15LQ9BU68 103 aa8.36□□□□□ -1.07
HMGB2-204ENST00000506267 LCE5AQ5TCM9 118 aa8.33□□□□□ -1.08
HMGB2-204ENST00000506267 KRTAP19-3Q7Z4W3 81 aa8.29□□□□□ -1.08
HMGB2-204ENST00000506267 KRTAP19-5Q3LI72 72 aa8.27□□□□□ -1.09
HMGB2-204ENST00000506267 C10orf95Q9H7T3 257 aa8.27□□□□□ -1.09
HMGB2-204ENST00000506267 DSTQ03001 7570 aaKnown RBP8.15□□□□□ -1.1
HMGB2-204ENST00000506267 TNP1P09430 55 aa8.14□□□□□ -1.11
HMGB2-204ENST00000506267 UQCR11O14957 56 aa8.12□□□□□ -1.11
HMGB2-204ENST00000506267 LCE3AQ5TA76 89 aa8.12□□□□□ -1.11
HMGB2-204ENST00000506267 MT1GP13640 62 aa8.1□□□□□ -1.11
HMGB2-204ENST00000506267 MT1LQ93083 61 aa8.04□□□□□ -1.12
HMGB2-204ENST00000506267 MT1MQ8N339 61 aa7.98□□□□□ -1.13
HMGB2-204ENST00000506267 PP632Q6XCG6 107 aa7.97□□□□□ -1.13
HMGB2-204ENST00000506267 MIR22HGQ0VDD5 57 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms