RNA–Protein interactions for RNA: ENST00000505074.5

PDLIM7-213, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-213ENST00000505074 ACYP1P07311 99 aa7.22□□□□□ -1.25
PDLIM7-213ENST00000505074 MT1BP07438 61 aa7.22□□□□□ -1.25
PDLIM7-213ENST00000505074 KRTAP10-5P60370 271 aa7.21□□□□□ -1.26
PDLIM7-213ENST00000505074 TP53AIP1Q9HCN2 124 aa7.18□□□□□ -1.26
PDLIM7-213ENST00000505074 SPRR2GQ9BYE4 73 aa7.14□□□□□ -1.27
PDLIM7-213ENST00000505074 KRTAP2-2Q9BYT5 123 aa7.13□□□□□ -1.27
PDLIM7-213ENST00000505074 KRTAP2-1Q9BYU5 128 aa7.13□□□□□ -1.27
PDLIM7-213ENST00000505074 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
PDLIM7-213ENST00000505074 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
PDLIM7-213ENST00000505074 SPRR2EP22531 72 aa7.11□□□□□ -1.27
PDLIM7-213ENST00000505074 SPRR2BP35325 72 aa7.11□□□□□ -1.27
PDLIM7-213ENST00000505074 SPRR2AP35326 72 aa7.11□□□□□ -1.27
PDLIM7-213ENST00000505074 LINC00643Q86TS7 51 aa7.08□□□□□ -1.28
PDLIM7-213ENST00000505074 IMUPQ9GZP8 106 aa7.07□□□□□ -1.28
PDLIM7-213ENST00000505074 ATP5EP2Q5VTU8 51 aa7.06□□□□□ -1.28
PDLIM7-213ENST00000505074 CYP4F30PQ9H0H9 118 aa7.06□□□□□ -1.28
PDLIM7-213ENST00000505074 SPRR2FQ96RM1 72 aa7.05□□□□□ -1.28
PDLIM7-213ENST00000505074 KRTAP3-3Q9BYR6 98 aa7.05□□□□□ -1.28
PDLIM7-213ENST00000505074 TRAV22A0A0B4J277 110 aa7.04□□□□□ -1.28
PDLIM7-213ENST00000505074 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
PDLIM7-213ENST00000505074 A0A087WVE0 104 aa7.01□□□□□ -1.29
PDLIM7-213ENST00000505074 LOC101927531A0A1B0GV80 90 aa7.01□□□□□ -1.29
PDLIM7-213ENST00000505074 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
PDLIM7-213ENST00000505074 SCGB1A1P11684 91 aa6.95□□□□□ -1.3
PDLIM7-213ENST00000505074 NDUFC1O43677 76 aa6.94□□□□□ -1.3
PDLIM7-213ENST00000505074 HIST1H4AP62805 103 aaKnown RBP6.93□□□□□ -1.3
PDLIM7-213ENST00000505074 H0Y9P7 68 aa6.92□□□□□ -1.3
PDLIM7-213ENST00000505074 LCE1AQ5T7P2 110 aa6.9□□□□□ -1.3
PDLIM7-213ENST00000505074 ATOX1O00244 68 aa6.89□□□□□ -1.31
PDLIM7-213ENST00000505074 UQCRQO14949 82 aa6.89□□□□□ -1.31
PDLIM7-213ENST00000505074 SPRR2DP22532 72 aa6.88□□□□□ -1.31
PDLIM7-213ENST00000505074 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
PDLIM7-213ENST00000505074 H0YAA0 97 aa6.85□□□□□ -1.31
PDLIM7-213ENST00000505074 A8MUN3 132 aa6.83□□□□□ -1.32
PDLIM7-213ENST00000505074 KRTAP8-1Q8IUC2 63 aa6.82□□□□□ -1.32
PDLIM7-213ENST00000505074 GPR98Q8WXG9 6306 aa6.8□□□□□ -1.32
PDLIM7-213ENST00000505074 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
PDLIM7-213ENST00000505074 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
PDLIM7-213ENST00000505074 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
PDLIM7-213ENST00000505074 LCE3BQ5TA77 95 aa6.74□□□□□ -1.33
PDLIM7-213ENST00000505074 ANAPC13Q9BS18 74 aa6.74□□□□□ -1.33
PDLIM7-213ENST00000505074 PCP4P48539 62 aa6.73□□□□□ -1.33
PDLIM7-213ENST00000505074 MP68P56378 58 aa6.73□□□□□ -1.33
PDLIM7-213ENST00000505074 SMIM20Q8N5G0 67 aa6.73□□□□□ -1.33
PDLIM7-213ENST00000505074 R4GN34 69 aa6.71□□□□□ -1.34
PDLIM7-213ENST00000505074 MT1XP80297 61 aa6.69□□□□□ -1.34
PDLIM7-213ENST00000505074 SERP2Q8N6R1 65 aa6.68□□□□□ -1.34
PDLIM7-213ENST00000505074 C20orf197Q8N268 126 aa6.67□□□□□ -1.34
PDLIM7-213ENST00000505074 TRAV7A0A075B6U4 112 aa6.66□□□□□ -1.34
PDLIM7-213ENST00000505074 OCR1Q9BZK8 76 aa6.66□□□□□ -1.34
PDLIM7-213ENST00000505074 M0QZ58 72 aa6.65□□□□□ -1.34
PDLIM7-213ENST00000505074 COX7CP15954 63 aa6.65□□□□□ -1.34
PDLIM7-213ENST00000505074 P0C880 135 aa6.64□□□□□ -1.35
PDLIM7-213ENST00000505074 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
PDLIM7-213ENST00000505074 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
PDLIM7-213ENST00000505074 CCDC179H3BU77 68 aa6.57□□□□□ -1.36
PDLIM7-213ENST00000505074 H3BPC8 53 aa6.55□□□□□ -1.36
PDLIM7-213ENST00000505074 DMAC1Q96GE9 116 aa6.55□□□□□ -1.36
PDLIM7-213ENST00000505074 KRTAP4-8A0A0G2JLE6 195 aa6.54□□□□□ -1.36
PDLIM7-213ENST00000505074 KRTAP4-8Q9BYQ9 185 aa6.54□□□□□ -1.36
PDLIM7-213ENST00000505074 SVIPQ8NHG7 77 aa6.53□□□□□ -1.36
PDLIM7-213ENST00000505074 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
PDLIM7-213ENST00000505074 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
PDLIM7-213ENST00000505074 SNURFQ9Y675 71 aa6.45□□□□□ -1.38
PDLIM7-213ENST00000505074 KRTAP4-9Q9BYQ8 210 aa6.43□□□□□ -1.38
PDLIM7-213ENST00000505074 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
PDLIM7-213ENST00000505074 H7BZZ5 65 aa6.41□□□□□ -1.38
PDLIM7-213ENST00000505074 KRTAP10-7P60409 375 aaPredicted RBP6.41□□□□□ -1.38
PDLIM7-213ENST00000505074 TMEM258P61165 79 aa6.4□□□□□ -1.38
PDLIM7-213ENST00000505074 ACYP2P14621 99 aa6.39□□□□□ -1.39
PDLIM7-213ENST00000505074 SPTSSBQ8NFR3 76 aa6.39□□□□□ -1.39
PDLIM7-213ENST00000505074 ATP5EP56381 51 aaPredicted RBP6.35□□□□□ -1.39
PDLIM7-213ENST00000505074 CHKB-CPT1BH3BT56 60 aa6.34□□□□□ -1.39
PDLIM7-213ENST00000505074 KRTAP10-12P60413 245 aa6.33□□□□□ -1.4
PDLIM7-213ENST00000505074 SPANXA2-OT1Q8N9U9 137 aa6.31□□□□□ -1.4
PDLIM7-213ENST00000505074 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
PDLIM7-213ENST00000505074 SERP1Q9Y6X1 66 aa6.18□□□□□ -1.42
PDLIM7-213ENST00000505074 CAMK2N1Q7Z7J9 78 aa6.17□□□□□ -1.42
PDLIM7-213ENST00000505074 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
PDLIM7-213ENST00000505074 KRTAP13-4Q3LI77 160 aa6.11□□□□□ -1.43
PDLIM7-213ENST00000505074 LCE5AQ5TCM9 118 aa6.1□□□□□ -1.43
PDLIM7-213ENST00000505074 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
PDLIM7-213ENST00000505074 KRTAP5-10Q6L8G5 202 aa6.08□□□□□ -1.44
PDLIM7-213ENST00000505074 COA5Q86WW8 74 aa6.08□□□□□ -1.44
PDLIM7-213ENST00000505074 MT4P47944 62 aa6.06□□□□□ -1.44
PDLIM7-213ENST00000505074 AHNAK2Q8IVF2 5795 aa6.04□□□□□ -1.44
PDLIM7-213ENST00000505074 LCE4AQ5TA78 99 aa6.04□□□□□ -1.44
PDLIM7-213ENST00000505074 SMIM26A0A096LP01 95 aa6□□□□□ -1.45
PDLIM7-213ENST00000505074 A0A0D9SG42 100 aa6□□□□□ -1.45
PDLIM7-213ENST00000505074 KRTAP19-3Q7Z4W3 81 aa6□□□□□ -1.45
PDLIM7-213ENST00000505074 SEC61GP60059 68 aa5.98□□□□□ -1.45
PDLIM7-213ENST00000505074 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
PDLIM7-213ENST00000505074 MT1EP04732 61 aa5.95□□□□□ -1.46
PDLIM7-213ENST00000505074 KRTAP5-7Q6L8G8 165 aa5.94□□□□□ -1.46
PDLIM7-213ENST00000505074 SPINT4Q6UDR6 99 aa5.93□□□□□ -1.46
PDLIM7-213ENST00000505074 SPATA8Q6RVD6 105 aa5.91□□□□□ -1.46
PDLIM7-213ENST00000505074 V9GYY9 64 aa5.91□□□□□ -1.46
PDLIM7-213ENST00000505074 Q1T7F1 81 aa5.9□□□□□ -1.46
PDLIM7-213ENST00000505074 LINC01558Q9Y6Z2 57 aa5.86□□□□□ -1.47
PDLIM7-213ENST00000505074 A0A1B0GU33 70 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms