RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 LINC00208Q96KT6 92 aa6.88□□□□□ -1.31
PRDM2-213ENST00000503842 ANAPC13Q9BS18 74 aa6.87□□□□□ -1.31
PRDM2-213ENST00000503842 COX7CP15954 63 aa6.86□□□□□ -1.31
PRDM2-213ENST00000503842 CYP4F30PQ9H0H9 118 aa6.86□□□□□ -1.31
PRDM2-213ENST00000503842 A0A0U1RQV1 116 aa6.85□□□□□ -1.31
PRDM2-213ENST00000503842 HRES1P13985 223 aa6.85□□□□□ -1.31
PRDM2-213ENST00000503842 MPLKIPQ8TAP9 179 aa6.84□□□□□ -1.31
PRDM2-213ENST00000503842 MUC2Q02817 5179 aa6.82□□□□□ -1.32
PRDM2-213ENST00000503842 C20orf197Q8N268 126 aa6.81□□□□□ -1.32
PRDM2-213ENST00000503842 SNURFQ9Y675 71 aa6.79□□□□□ -1.32
PRDM2-213ENST00000503842 KLKP1Q107X0 134 aa6.78□□□□□ -1.32
PRDM2-213ENST00000503842 KRTAP19-2Q3LHN2 52 aa6.75□□□□□ -1.33
PRDM2-213ENST00000503842 CCDC179H3BU77 68 aa6.74□□□□□ -1.33
PRDM2-213ENST00000503842 C4orf26Q17RF5 130 aa6.73□□□□□ -1.33
PRDM2-213ENST00000503842 RBM12B-AS1Q9P1G2 102 aa6.73□□□□□ -1.33
PRDM2-213ENST00000503842 COX6B2Q6YFQ2 88 aa6.71□□□□□ -1.34
PRDM2-213ENST00000503842 CYSTM1Q9H1C7 97 aa6.7□□□□□ -1.34
PRDM2-213ENST00000503842 FAT4Q6V0I7 4981 aa6.68□□□□□ -1.34
PRDM2-213ENST00000503842 NDUFC1O43677 76 aa6.67□□□□□ -1.34
PRDM2-213ENST00000503842 FLGP20930 4061 aaPredicted RBP6.66□□□□□ -1.34
PRDM2-213ENST00000503842 FAM236DA0A1B0GTK5 79 aa6.66□□□□□ -1.34
PRDM2-213ENST00000503842 H7BZZ5 65 aa6.66□□□□□ -1.34
PRDM2-213ENST00000503842 FAM236CP0DP71 79 aa6.66□□□□□ -1.34
PRDM2-213ENST00000503842 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
PRDM2-213ENST00000503842 A8MUN3 132 aa6.61□□□□□ -1.35
PRDM2-213ENST00000503842 H1FX-AS1Q4G0G2 97 aa6.61□□□□□ -1.35
PRDM2-213ENST00000503842 DMAC1Q96GE9 116 aa6.61□□□□□ -1.35
PRDM2-213ENST00000503842 A0A0A0MQY5 61 aa6.59□□□□□ -1.35
PRDM2-213ENST00000503842 MT1HP80294 61 aa6.54□□□□□ -1.36
PRDM2-213ENST00000503842 ACYP2P14621 99 aa6.51□□□□□ -1.37
PRDM2-213ENST00000503842 TMEM258P61165 79 aa6.5□□□□□ -1.37
PRDM2-213ENST00000503842 S4R3F8 94 aa6.5□□□□□ -1.37
PRDM2-213ENST00000503842 ATP5EP56381 51 aaPredicted RBP6.48□□□□□ -1.37
PRDM2-213ENST00000503842 KRTAP5-3Q6L8H2 238 aa6.47□□□□□ -1.37
PRDM2-213ENST00000503842 LCA10Q71F78 164 aa6.47□□□□□ -1.37
PRDM2-213ENST00000503842 COA5Q86WW8 74 aa6.42□□□□□ -1.38
PRDM2-213ENST00000503842 M0R2T5 61 aa6.4□□□□□ -1.38
PRDM2-213ENST00000503842 CHKB-CPT1BH3BT56 60 aa6.38□□□□□ -1.39
PRDM2-213ENST00000503842 CSAG1Q6PB30 78 aa6.38□□□□□ -1.39
PRDM2-213ENST00000503842 KRTAP10-6P60371 365 aaPredicted RBP6.34□□□□□ -1.39
PRDM2-213ENST00000503842 LCE1AQ5T7P2 110 aa6.34□□□□□ -1.39
PRDM2-213ENST00000503842 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
PRDM2-213ENST00000503842 SERP1Q9Y6X1 66 aa6.3□□□□□ -1.4
PRDM2-213ENST00000503842 KRTAP9-8Q9BYQ0 159 aa6.27□□□□□ -1.41
PRDM2-213ENST00000503842 H0YAA0 97 aa6.24□□□□□ -1.41
PRDM2-213ENST00000503842 MT2AP02795 61 aa6.23□□□□□ -1.41
PRDM2-213ENST00000503842 MT1FP04733 61 aa6.19□□□□□ -1.42
PRDM2-213ENST00000503842 RPS28P62857 69 aaKnown RBP6.18□□□□□ -1.42
PRDM2-213ENST00000503842 ADM2Q7Z4H4 148 aa6.18□□□□□ -1.42
PRDM2-213ENST00000503842 KRTAP10-10P60014 251 aa6.14□□□□□ -1.43
PRDM2-213ENST00000503842 P0C880 135 aa6.12□□□□□ -1.43
PRDM2-213ENST00000503842 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
PRDM2-213ENST00000503842 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.43
PRDM2-213ENST00000503842 SEC61GP60059 68 aa6.07□□□□□ -1.44
PRDM2-213ENST00000503842 A0A1B0GU69 56 aa6.05□□□□□ -1.44
PRDM2-213ENST00000503842 Q1T7F1 81 aa6.04□□□□□ -1.44
PRDM2-213ENST00000503842 CRIPTQ9P021 101 aa6.04□□□□□ -1.44
PRDM2-213ENST00000503842 V9GYY9 64 aa6.03□□□□□ -1.44
PRDM2-213ENST00000503842 PRR15LQ9BU68 103 aa6□□□□□ -1.45
PRDM2-213ENST00000503842 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
PRDM2-213ENST00000503842 R4GN34 69 aa5.96□□□□□ -1.46
PRDM2-213ENST00000503842 A0A1B0GU33 70 aa5.95□□□□□ -1.46
PRDM2-213ENST00000503842 M0QZ58 72 aa5.95□□□□□ -1.46
PRDM2-213ENST00000503842 MT3P25713 68 aa5.94□□□□□ -1.46
PRDM2-213ENST00000503842 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
PRDM2-213ENST00000503842 PSPHP1O15172 72 aa5.92□□□□□ -1.46
PRDM2-213ENST00000503842 Q5VV11 94 aa5.9□□□□□ -1.46
PRDM2-213ENST00000503842 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
PRDM2-213ENST00000503842 KRTAP19-8Q3LI54 63 aa5.89□□□□□ -1.47
PRDM2-213ENST00000503842 USH2AO75445 5202 aa5.88□□□□□ -1.47
PRDM2-213ENST00000503842 SPATA8Q6RVD6 105 aa5.86□□□□□ -1.47
PRDM2-213ENST00000503842 UQCR11O14957 56 aa5.83□□□□□ -1.48
PRDM2-213ENST00000503842 MT1BP07438 61 aa5.82□□□□□ -1.48
PRDM2-213ENST00000503842 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
PRDM2-213ENST00000503842 A6NN06 94 aa5.77□□□□□ -1.49
PRDM2-213ENST00000503842 A0A0D9SG42 100 aa5.76□□□□□ -1.49
PRDM2-213ENST00000503842 A8MU10 97 aa5.75□□□□□ -1.49
PRDM2-213ENST00000503842 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
PRDM2-213ENST00000503842 A6NED7 52 aa5.74□□□□□ -1.49
PRDM2-213ENST00000503842 SSPOA2VEC9 5147 aa5.72□□□□□ -1.49
PRDM2-213ENST00000503842 PLAC4Q8WY50 150 aa5.7□□□□□ -1.5
PRDM2-213ENST00000503842 KRTAP12-1P59990 96 aa5.69□□□□□ -1.5
PRDM2-213ENST00000503842 KRTAP12-2P59991 146 aa5.65□□□□□ -1.5
PRDM2-213ENST00000503842 FSIP2Q5CZC0 6907 aa5.65□□□□□ -1.51
PRDM2-213ENST00000503842 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
PRDM2-213ENST00000503842 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
PRDM2-213ENST00000503842 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
PRDM2-213ENST00000503842 CRCT1Q9UGL9 99 aa5.6□□□□□ -1.51
PRDM2-213ENST00000503842 KRTAP10-5P60370 271 aa5.57□□□□□ -1.52
PRDM2-213ENST00000503842 MT1XP80297 61 aa5.57□□□□□ -1.52
PRDM2-213ENST00000503842 CAMK2N1Q7Z7J9 78 aa5.55□□□□□ -1.52
PRDM2-213ENST00000503842 K7ERS5 55 aa5.51□□□□□ -1.53
PRDM2-213ENST00000503842 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
PRDM2-213ENST00000503842 FCGBPQ9Y6R7 5405 aaPredicted RBP5.51□□□□□ -1.53
PRDM2-213ENST00000503842 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
PRDM2-213ENST00000503842 BRK1Q8WUW1 75 aa5.49□□□□□ -1.53
PRDM2-213ENST00000503842 PRAC1Q96KF2 57 aa5.49□□□□□ -1.53
PRDM2-213ENST00000503842 NDUFAF8A1L188 74 aa5.43□□□□□ -1.54
PRDM2-213ENST00000503842 C10orf95Q9H7T3 257 aa5.4□□□□□ -1.54
PRDM2-213ENST00000503842 LCE1EQ5T753 118 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms