RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 HIST1H2BOP23527 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST1H2BBP33778 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST1H2BDP58876 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST1H2BCP62807 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST2H2BEQ16778 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST1H2BHQ93079 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST1H2BNQ99877 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 HIST1H2BMQ99879 126 aa4.18□□□□□ -1.74
TNPO1-202ENST00000503084 SNRPEP62304 92 aaKnown RBP4.17□□□□□ -1.74
TNPO1-202ENST00000503084 C9JAW5 83 aa4.16□□□□□ -1.74
TNPO1-202ENST00000503084 HCG22E2RYF7 251 aa4.16□□□□□ -1.74
TNPO1-202ENST00000503084 MT1GP13640 62 aa4.14□□□□□ -1.75
TNPO1-202ENST00000503084 R4GN34 69 aa4.14□□□□□ -1.75
TNPO1-202ENST00000503084 CEND1Q8N111 149 aa4.12□□□□□ -1.75
TNPO1-202ENST00000503084 MT1MQ8N339 61 aa4.12□□□□□ -1.75
TNPO1-202ENST00000503084 CXCL6P80162 114 aa4.11□□□□□ -1.75
TNPO1-202ENST00000503084 PP632Q6XCG6 107 aa4.11□□□□□ -1.75
TNPO1-202ENST00000503084 M0QZ58 72 aa4.1□□□□□ -1.75
TNPO1-202ENST00000503084 LINC01554Q52M75 96 aa4.1□□□□□ -1.75
TNPO1-202ENST00000503084 PRO1854Q9UHT4 67 aa4.1□□□□□ -1.75
TNPO1-202ENST00000503084 HSBP1L1C9JCN9 74 aa4.08□□□□□ -1.76
TNPO1-202ENST00000503084 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
TNPO1-202ENST00000503084 A0A1B0GW54 56 aa4.07□□□□□ -1.76
TNPO1-202ENST00000503084 NREPQ16612 68 aa4.07□□□□□ -1.76
TNPO1-202ENST00000503084 NDUFC1O43677 76 aa4.06□□□□□ -1.76
TNPO1-202ENST00000503084 CASC2Q6XLA1 102 aa4.06□□□□□ -1.76
TNPO1-202ENST00000503084 P0C880 135 aa4.04□□□□□ -1.76
TNPO1-202ENST00000503084 PSMB2P49721 201 aa4.03□□□□□ -1.76
TNPO1-202ENST00000503084 COA6Q5JTJ3 125 aaKnown RBP4.03□□□□□ -1.76
TNPO1-202ENST00000503084 LOC110117498A0A087WWA1 95 aa4.02□□□□□ -1.77
TNPO1-202ENST00000503084 COX8AP10176 69 aa4.01□□□□□ -1.77
TNPO1-202ENST00000503084 Q8N9L7 120 aa4□□□□□ -1.77
TNPO1-202ENST00000503084 FXYD2P54710 66 aa3.99□□□□□ -1.77
TNPO1-202ENST00000503084 HIST3H2BBQ8N257 126 aa3.99□□□□□ -1.77
TNPO1-202ENST00000503084 COX6CP09669 75 aa3.97□□□□□ -1.77
TNPO1-202ENST00000503084 BAALC-AS2P0C853 105 aa3.97□□□□□ -1.77
TNPO1-202ENST00000503084 K7ERJ3 54 aa3.96□□□□□ -1.78
TNPO1-202ENST00000503084 DLEU1O43261 78 aa3.96□□□□□ -1.78
TNPO1-202ENST00000503084 KRTAP5-8O75690 187 aa3.96□□□□□ -1.78
TNPO1-202ENST00000503084 HIGD1BQ9P298 99 aa3.96□□□□□ -1.78
TNPO1-202ENST00000503084 KRTAP19-5Q3LI72 72 aa3.95□□□□□ -1.78
TNPO1-202ENST00000503084 MT1LQ93083 61 aa3.95□□□□□ -1.78
TNPO1-202ENST00000503084 K7EP34 96 aa3.94□□□□□ -1.78
TNPO1-202ENST00000503084 BPY2O14599 106 aa3.94□□□□□ -1.78
TNPO1-202ENST00000503084 C20orf197Q8N268 126 aa3.94□□□□□ -1.78
TNPO1-202ENST00000503084 C14orf132Q9NPU4 83 aa3.94□□□□□ -1.78
TNPO1-202ENST00000503084 HIST1H2BLQ99880 126 aa3.92□□□□□ -1.78
TNPO1-202ENST00000503084 JMJD7-PLA2G4BH0Y9G9 81 aa3.91□□□□□ -1.78
TNPO1-202ENST00000503084 C14orf144Q96I85 54 aa3.91□□□□□ -1.78
TNPO1-202ENST00000503084 KRTAP12-4P60329 112 aa3.9□□□□□ -1.79
TNPO1-202ENST00000503084 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
TNPO1-202ENST00000503084 CYP4F30PQ9H0H9 118 aa3.89□□□□□ -1.79
TNPO1-202ENST00000503084 BATFQ16520 125 aa3.87□□□□□ -1.79
TNPO1-202ENST00000503084 A0A1W2PPM0 123 aa3.85□□□□□ -1.79
TNPO1-202ENST00000503084 KRTAP5-5Q701N2 237 aaPredicted RBP3.85□□□□□ -1.79
TNPO1-202ENST00000503084 SCGB1C2P0DMR2 95 aa3.83□□□□□ -1.8
TNPO1-202ENST00000503084 NAA38Q9BRA0 125 aaKnown RBP3.82□□□□□ -1.8
TNPO1-202ENST00000503084 MT-ATP8P03928 68 aa3.81□□□□□ -1.8
TNPO1-202ENST00000503084 TP53AIP1Q9HCN2 124 aa3.78□□□□□ -1.8
TNPO1-202ENST00000503084 ACYP1P07311 99 aa3.77□□□□□ -1.81
TNPO1-202ENST00000503084 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
TNPO1-202ENST00000503084 SPATA45Q537H7 98 aa3.77□□□□□ -1.81
TNPO1-202ENST00000503084 S100A2P29034 98 aa3.76□□□□□ -1.81
TNPO1-202ENST00000503084 A0A0D9SG42 100 aa3.74□□□□□ -1.81
TNPO1-202ENST00000503084 VAMP8Q9BV40 100 aa3.74□□□□□ -1.81
TNPO1-202ENST00000503084 TRAV22A0A0B4J277 110 aa3.73□□□□□ -1.81
TNPO1-202ENST00000503084 HSD52Q0P140 79 aa3.73□□□□□ -1.81
TNPO1-202ENST00000503084 KRTAP5-2Q701N4 177 aa3.73□□□□□ -1.81
TNPO1-202ENST00000503084 LOC101927531A0A1B0GV80 90 aa3.72□□□□□ -1.81
TNPO1-202ENST00000503084 MT3P25713 68 aa3.71□□□□□ -1.82
TNPO1-202ENST00000503084 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
TNPO1-202ENST00000503084 PRAC1Q96KF2 57 aa3.69□□□□□ -1.82
TNPO1-202ENST00000503084 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
TNPO1-202ENST00000503084 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
TNPO1-202ENST00000503084 C10orf95Q9H7T3 257 aa3.58□□□□□ -1.84
TNPO1-202ENST00000503084 SPCS1Q9Y6A9 102 aa3.56□□□□□ -1.84
TNPO1-202ENST00000503084 S100A6P06703 90 aa3.51□□□□□ -1.85
TNPO1-202ENST00000503084 UBL5Q9BZL1 73 aa3.51□□□□□ -1.85
TNPO1-202ENST00000503084 TSTD3H0UI37 97 aa3.5□□□□□ -1.85
TNPO1-202ENST00000503084 H0Y9P7 68 aa3.5□□□□□ -1.85
TNPO1-202ENST00000503084 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
TNPO1-202ENST00000503084 LCE3AQ5TA76 89 aa3.49□□□□□ -1.85
TNPO1-202ENST00000503084 S100A1P23297 94 aa3.48□□□□□ -1.85
TNPO1-202ENST00000503084 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
TNPO1-202ENST00000503084 KRTAP5-11Q6L8G4 156 aa3.48□□□□□ -1.85
TNPO1-202ENST00000503084 ATOX1O00244 68 aa3.47□□□□□ -1.85
TNPO1-202ENST00000503084 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
TNPO1-202ENST00000503084 H3BT86 120 aa3.46□□□□□ -1.86
TNPO1-202ENST00000503084 KRTAP5-1Q6L8H4 278 aa3.46□□□□□ -1.86
TNPO1-202ENST00000503084 UQCRQO14949 82 aa3.4□□□□□ -1.87
TNPO1-202ENST00000503084 DMAC1Q96GE9 116 aa3.39□□□□□ -1.87
TNPO1-202ENST00000503084 KRTAP6-1Q3LI64 71 aa3.38□□□□□ -1.87
TNPO1-202ENST00000503084 KRTAP6-2Q3LI66 62 aa3.38□□□□□ -1.87
TNPO1-202ENST00000503084 UQCR10Q9UDW1 63 aa3.38□□□□□ -1.87
TNPO1-202ENST00000503084 LINC00208Q96KT6 92 aa3.36□□□□□ -1.87
TNPO1-202ENST00000503084 MT1AP04731 61 aa3.33□□□□□ -1.88
TNPO1-202ENST00000503084 LCE1EQ5T753 118 aa3.33□□□□□ -1.88
TNPO1-202ENST00000503084 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
TNPO1-202ENST00000503084 TAX1BP3O14907 124 aa3.31□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 108.9 ms