RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 UBL5Q9BZL1 73 aa2.65□□□□□ -1.99
LSM3P4-201ENST00000502948 KMT2DO14686 5537 aa2.65□□□□□ -1.99
LSM3P4-201ENST00000502948 TSTD3H0UI37 97 aa2.64□□□□□ -1.99
LSM3P4-201ENST00000502948 TAX1BP3O14907 124 aa2.63□□□□□ -1.99
LSM3P4-201ENST00000502948 IMUPQ9GZP8 106 aa2.63□□□□□ -1.99
LSM3P4-201ENST00000502948 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
LSM3P4-201ENST00000502948 KRTAP9-4Q9BYQ2 154 aa2.62□□□□□ -1.99
LSM3P4-201ENST00000502948 CYP4F30PQ9H0H9 118 aa2.62□□□□□ -1.99
LSM3P4-201ENST00000502948 PRO2289Q9P1D8 64 aa2.61□□□□□ -1.99
LSM3P4-201ENST00000502948 MDN1Q9NU22 5596 aa2.6□□□□□ -1.99
LSM3P4-201ENST00000502948 LOC101927531A0A1B0GV80 90 aa2.59□□□□□ -1.99
LSM3P4-201ENST00000502948 KRTAP12-2P59991 146 aa2.59□□□□□ -1.99
LSM3P4-201ENST00000502948 SPCS1Q9Y6A9 102 aa2.59□□□□□ -1.99
LSM3P4-201ENST00000502948 BATFQ16520 125 aa2.58□□□□□ -2
LSM3P4-201ENST00000502948 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
LSM3P4-201ENST00000502948 KRTAP2-2Q9BYT5 123 aa2.58□□□□□ -2
LSM3P4-201ENST00000502948 KRTAP2-1Q9BYU5 128 aa2.58□□□□□ -2
LSM3P4-201ENST00000502948 PRO0461Q9UI25 63 aa2.58□□□□□ -2
LSM3P4-201ENST00000502948 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
LSM3P4-201ENST00000502948 A8MUN3 132 aa2.57□□□□□ -2
LSM3P4-201ENST00000502948 NDUFC1O43677 76 aa2.57□□□□□ -2
LSM3P4-201ENST00000502948 MT1XP80297 61 aa2.57□□□□□ -2
LSM3P4-201ENST00000502948 SPRR2EP22531 72 aa2.56□□□□□ -2
LSM3P4-201ENST00000502948 SPRR2BP35325 72 aa2.56□□□□□ -2
LSM3P4-201ENST00000502948 SPRR2AP35326 72 aa2.56□□□□□ -2
LSM3P4-201ENST00000502948 LCE1AQ5T7P2 110 aa2.56□□□□□ -2
LSM3P4-201ENST00000502948 A0A087WVE0 104 aa2.55□□□□□ -2
LSM3P4-201ENST00000502948 ATOX1O00244 68 aa2.55□□□□□ -2
LSM3P4-201ENST00000502948 KRTAP8-1Q8IUC2 63 aa2.55□□□□□ -2
LSM3P4-201ENST00000502948 PLAC4Q8WY50 150 aa2.54□□□□□ -2
LSM3P4-201ENST00000502948 F8W1H4 67 aa2.53□□□□□ -2
LSM3P4-201ENST00000502948 K7EP34 96 aa2.53□□□□□ -2
LSM3P4-201ENST00000502948 ACYP1P07311 99 aa2.53□□□□□ -2
LSM3P4-201ENST00000502948 UQCRQO14949 82 aa2.52□□□□□ -2.01
LSM3P4-201ENST00000502948 PCP4P48539 62 aa2.52□□□□□ -2.01
LSM3P4-201ENST00000502948 COL5A1-AS1Q5SY13 56 aa2.52□□□□□ -2.01
LSM3P4-201ENST00000502948 LCE1DQ5T752 114 aa2.52□□□□□ -2.01
LSM3P4-201ENST00000502948 KRTAP4-8A0A0G2JLE6 195 aa2.51□□□□□ -2.01
LSM3P4-201ENST00000502948 ATP5EP2Q5VTU8 51 aa2.51□□□□□ -2.01
LSM3P4-201ENST00000502948 ADM2Q7Z4H4 148 aa2.51□□□□□ -2.01
LSM3P4-201ENST00000502948 GTF2H5Q6ZYL4 71 aa2.5□□□□□ -2.01
LSM3P4-201ENST00000502948 C20orf197Q8N268 126 aa2.5□□□□□ -2.01
LSM3P4-201ENST00000502948 FAM240AA0A1B0GVK7 77 aa2.49□□□□□ -2.01
LSM3P4-201ENST00000502948 SPRR2DP22532 72 aa2.49□□□□□ -2.01
LSM3P4-201ENST00000502948 R4GN34 69 aa2.49□□□□□ -2.01
LSM3P4-201ENST00000502948 H0Y9P7 68 aa2.48□□□□□ -2.01
LSM3P4-201ENST00000502948 KRTAP15-1Q3LI76 137 aa2.48□□□□□ -2.01
LSM3P4-201ENST00000502948 ETDBQ3ZM63 59 aa2.48□□□□□ -2.01
LSM3P4-201ENST00000502948 LOC105371267A0A1B0GV96 52 aa2.47□□□□□ -2.01
LSM3P4-201ENST00000502948 KRTAP10-12P60413 245 aa2.47□□□□□ -2.01
LSM3P4-201ENST00000502948 LCE5AQ5TCM9 118 aa2.45□□□□□ -2.02
LSM3P4-201ENST00000502948 M0QZ58 72 aa2.44□□□□□ -2.02
LSM3P4-201ENST00000502948 P0C880 135 aa2.44□□□□□ -2.02
LSM3P4-201ENST00000502948 H3BPC8 53 aa2.43□□□□□ -2.02
LSM3P4-201ENST00000502948 MP68P56378 58 aa2.43□□□□□ -2.02
LSM3P4-201ENST00000502948 LINC00208Q96KT6 92 aa2.43□□□□□ -2.02
LSM3P4-201ENST00000502948 OCR1Q9BZK8 76 aa2.43□□□□□ -2.02
LSM3P4-201ENST00000502948 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
LSM3P4-201ENST00000502948 HIST1H4AP62805 103 aaKnown RBP2.42□□□□□ -2.02
LSM3P4-201ENST00000502948 DMAC1Q96GE9 116 aa2.42□□□□□ -2.02
LSM3P4-201ENST00000502948 KRTAP4-7Q9BYR0 210 aa2.42□□□□□ -2.02
LSM3P4-201ENST00000502948 LINC00643Q86TS7 51 aa2.41□□□□□ -2.02
LSM3P4-201ENST00000502948 KRTAP4-9Q9BYQ8 210 aa2.41□□□□□ -2.02
LSM3P4-201ENST00000502948 A0A0A0MQY5 61 aa2.4□□□□□ -2.03
LSM3P4-201ENST00000502948 TRAV7A0A075B6U4 112 aa2.39□□□□□ -2.03
LSM3P4-201ENST00000502948 LINC01554Q52M75 96 aa2.36□□□□□ -2.03
LSM3P4-201ENST00000502948 KRTAP4-11Q9BYQ6 195 aa2.35□□□□□ -2.03
LSM3P4-201ENST00000502948 ACYP2P14621 99 aa2.34□□□□□ -2.03
LSM3P4-201ENST00000502948 SPTSSBQ8NFR3 76 aa2.34□□□□□ -2.03
LSM3P4-201ENST00000502948 MT-ATP8P03928 68 aa2.33□□□□□ -2.04
LSM3P4-201ENST00000502948 KRTAP19-7Q3SYF9 63 aa2.31□□□□□ -2.04
LSM3P4-201ENST00000502948 KRTAP4-2Q9BYR5 136 aa2.31□□□□□ -2.04
LSM3P4-201ENST00000502948 KRTAP19-3Q7Z4W3 81 aa2.3□□□□□ -2.04
LSM3P4-201ENST00000502948 MT1EP04732 61 aa2.29□□□□□ -2.04
LSM3P4-201ENST00000502948 SCGB1A1P11684 91 aa2.28□□□□□ -2.04
LSM3P4-201ENST00000502948 DSTQ03001 7570 aaKnown RBP2.28□□□□□ -2.04
LSM3P4-201ENST00000502948 MT1GP13640 62 aa2.27□□□□□ -2.05
LSM3P4-201ENST00000502948 J3QR89 54 aa2.26□□□□□ -2.05
LSM3P4-201ENST00000502948 SMIM20Q8N5G0 67 aa2.26□□□□□ -2.05
LSM3P4-201ENST00000502948 PCP4L1A6NKN8 68 aa2.25□□□□□ -2.05
LSM3P4-201ENST00000502948 CYSTM1Q9H1C7 97 aa2.25□□□□□ -2.05
LSM3P4-201ENST00000502948 PP632Q6XCG6 107 aa2.24□□□□□ -2.05
LSM3P4-201ENST00000502948 CAMK2N1Q7Z7J9 78 aa2.24□□□□□ -2.05
LSM3P4-201ENST00000502948 CHKB-CPT1BH3BT56 60 aa2.23□□□□□ -2.05
LSM3P4-201ENST00000502948 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
LSM3P4-201ENST00000502948 SPANXA2-OT1Q8N9U9 137 aa2.23□□□□□ -2.05
LSM3P4-201ENST00000502948 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
LSM3P4-201ENST00000502948 KRTAP5-4Q6L8H1 288 aa2.2□□□□□ -2.06
LSM3P4-201ENST00000502948 A0A0D9SG42 100 aa2.19□□□□□ -2.06
LSM3P4-201ENST00000502948 KRTAP19-5Q3LI72 72 aa2.18□□□□□ -2.06
LSM3P4-201ENST00000502948 MT1MQ8N339 61 aa2.18□□□□□ -2.06
LSM3P4-201ENST00000502948 KRTAP5-10Q6L8G5 202 aa2.17□□□□□ -2.06
LSM3P4-201ENST00000502948 MT1LQ93083 61 aa2.16□□□□□ -2.06
LSM3P4-201ENST00000502948 HMCN1Q96RW7 5635 aa2.16□□□□□ -2.06
LSM3P4-201ENST00000502948 A0A1B0GV90 55 aa2.15□□□□□ -2.07
LSM3P4-201ENST00000502948 MT4P47944 62 aa2.15□□□□□ -2.07
LSM3P4-201ENST00000502948 SEC61GP60059 68 aa2.14□□□□□ -2.07
LSM3P4-201ENST00000502948 SERP1Q9Y6X1 66 aa2.14□□□□□ -2.07
LSM3P4-201ENST00000502948 SNURFQ9Y675 71 aa2.13□□□□□ -2.07
LSM3P4-201ENST00000502948 KRTAP12-1P59990 96 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms