RNA–Protein interactions for RNA: ENST00000502394.1

MATR3-231, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-231	ENST00000502394	C7orf65	Q6ZTY9	151 aa		6.31	□□□□□ -1.4
MATR3-231	ENST00000502394	C20orf197	Q8N268	126 aa		6.31	□□□□□ -1.4
MATR3-231	ENST00000502394	CYP4F30P	Q9H0H9	118 aa		6.31	□□□□□ -1.4
MATR3-231	ENST00000502394	SPINK7	P58062	85 aa		6.3	□□□□□ -1.4
MATR3-231	ENST00000502394	IGKV2D-30	A0A075B6S6	120 aa		6.29	□□□□□ -1.4
MATR3-231	ENST00000502394	CCDC179	H3BU77	68 aa		6.29	□□□□□ -1.4
MATR3-231	ENST00000502394	UBR4	Q5T4S7	5183 aa		6.29	□□□□□ -1.4
MATR3-231	ENST00000502394	SNURF	Q9Y675	71 aa		6.28	□□□□□ -1.4
MATR3-231	ENST00000502394	HRES1	P13985	223 aa		6.26	□□□□□ -1.41
MATR3-231	ENST00000502394	CYSTM1	Q9H1C7	97 aa		6.26	□□□□□ -1.41
MATR3-231	ENST00000502394	RNF213	Q63HN8	5207 aa		6.25	□□□□□ -1.41
MATR3-231	ENST00000502394	PCP4	P48539	62 aa		6.24	□□□□□ -1.41
MATR3-231	ENST00000502394	MPLKIP	Q8TAP9	179 aa		6.23	□□□□□ -1.41
MATR3-231	ENST00000502394		H7BZZ5	65 aa		6.2	□□□□□ -1.42
MATR3-231	ENST00000502394	NDUFC1	O43677	76 aa		6.19	□□□□□ -1.42
MATR3-231	ENST00000502394	MUC2	Q02817	5179 aa		6.18	□□□□□ -1.42
MATR3-231	ENST00000502394	KRTAP19-2	Q3LHN2	52 aa		6.17	□□□□□ -1.42
MATR3-231	ENST00000502394	C4orf26	Q17RF5	130 aa		6.15	□□□□□ -1.42
MATR3-231	ENST00000502394	SPANXA2-OT1	Q8N9U9	137 aa		6.15	□□□□□ -1.42
MATR3-231	ENST00000502394	COX6B2	Q6YFQ2	88 aa		6.14	□□□□□ -1.43
MATR3-231	ENST00000502394	DMAC1	Q96GE9	116 aa		6.09	□□□□□ -1.43
MATR3-231	ENST00000502394	KRTAP9-8	Q9BYQ0	159 aa		6.09	□□□□□ -1.43
MATR3-231	ENST00000502394	RBM12B-AS1	Q9P1G2	102 aa		6.09	□□□□□ -1.43
MATR3-231	ENST00000502394	FLG	P20930	4061 aa	Predicted RBP	6.08	□□□□□ -1.44
MATR3-231	ENST00000502394		A8MUN3	132 aa		6.07	□□□□□ -1.44
MATR3-231	ENST00000502394	TMEM258	P61165	79 aa		6.06	□□□□□ -1.44
MATR3-231	ENST00000502394	FAT4	Q6V0I7	4981 aa		6.05	□□□□□ -1.44
MATR3-231	ENST00000502394	FAM236D	A0A1B0GTK5	79 aa		6.03	□□□□□ -1.44
MATR3-231	ENST00000502394	FAM236C	P0DP71	79 aa		6.03	□□□□□ -1.44
MATR3-231	ENST00000502394	ATP5E	P56381	51 aa	Predicted RBP	6.03	□□□□□ -1.44
MATR3-231	ENST00000502394	H1FX-AS1	Q4G0G2	97 aa		6.02	□□□□□ -1.45
MATR3-231	ENST00000502394	ACYP2	P14621	99 aa		5.99	□□□□□ -1.45
MATR3-231	ENST00000502394	COA5	Q86WW8	74 aa		5.93	□□□□□ -1.46
MATR3-231	ENST00000502394	MT1H	P80294	61 aa		5.92	□□□□□ -1.46
MATR3-231	ENST00000502394	LCA10	Q71F78	164 aa		5.92	□□□□□ -1.46
MATR3-231	ENST00000502394		S4R3F8	94 aa		5.92	□□□□□ -1.46
MATR3-231	ENST00000502394	SERP1	Q9Y6X1	66 aa		5.88	□□□□□ -1.47
MATR3-231	ENST00000502394	CHKB-CPT1B	H3BT56	60 aa		5.85	□□□□□ -1.47
MATR3-231	ENST00000502394	CSAG1	Q6PB30	78 aa		5.81	□□□□□ -1.48
MATR3-231	ENST00000502394	RPS28	P62857	69 aa	Known RBP	5.8	□□□□□ -1.48
MATR3-231	ENST00000502394	SPTSSB	Q8NFR3	76 aa		5.79	□□□□□ -1.48
MATR3-231	ENST00000502394	LCE1A	Q5T7P2	110 aa		5.77	□□□□□ -1.49
MATR3-231	ENST00000502394		M0R2T5	61 aa		5.74	□□□□□ -1.49
MATR3-231	ENST00000502394	KRTAP10-6	P60371	365 aa	Predicted RBP	5.73	□□□□□ -1.49
MATR3-231	ENST00000502394		H0YAA0	97 aa		5.72	□□□□□ -1.49
MATR3-231	ENST00000502394	SMIM26	A0A096LP01	95 aa		5.69	□□□□□ -1.5
MATR3-231	ENST00000502394	LINC01558	Q9Y6Z2	57 aa		5.68	□□□□□ -1.5
MATR3-231	ENST00000502394	MT2A	P02795	61 aa		5.65	□□□□□ -1.5
MATR3-231	ENST00000502394		Q1T7F1	81 aa		5.63	□□□□□ -1.51
MATR3-231	ENST00000502394	ADM2	Q7Z4H4	148 aa		5.63	□□□□□ -1.51
MATR3-231	ENST00000502394	MT1F	P04733	61 aa		5.62	□□□□□ -1.51
MATR3-231	ENST00000502394		P0C880	135 aa		5.62	□□□□□ -1.51
MATR3-231	ENST00000502394		V9GYY9	64 aa		5.6	□□□□□ -1.51
MATR3-231	ENST00000502394		A0A1B0GU69	56 aa		5.57	□□□□□ -1.52
MATR3-231	ENST00000502394	SEC61G	P60059	68 aa		5.56	□□□□□ -1.52
MATR3-231	ENST00000502394	KRTAP10-10	P60014	251 aa		5.54	□□□□□ -1.52
MATR3-231	ENST00000502394	PRR15L	Q9BU68	103 aa		5.53	□□□□□ -1.52
MATR3-231	ENST00000502394		Q5VV11	94 aa		5.51	□□□□□ -1.53
MATR3-231	ENST00000502394	CRIPT	Q9P021	101 aa		5.5	□□□□□ -1.53
MATR3-231	ENST00000502394	PSPHP1	O15172	72 aa		5.49	□□□□□ -1.53
MATR3-231	ENST00000502394		A0A1B0GU33	70 aa		5.47	□□□□□ -1.53
MATR3-231	ENST00000502394	KRTAP13-4	Q3LI77	160 aa		5.47	□□□□□ -1.53
MATR3-231	ENST00000502394	SPRR2G	Q9BYE4	73 aa		5.47	□□□□□ -1.53
MATR3-231	ENST00000502394		M0QZ58	72 aa		5.45	□□□□□ -1.54
MATR3-231	ENST00000502394		R4GN34	69 aa		5.43	□□□□□ -1.54
MATR3-231	ENST00000502394	UQCR11	O14957	56 aa		5.39	□□□□□ -1.55
MATR3-231	ENST00000502394	SPATA8	Q6RVD6	105 aa		5.39	□□□□□ -1.55
MATR3-231	ENST00000502394	KRTAP19-8	Q3LI54	63 aa		5.37	□□□□□ -1.55
MATR3-231	ENST00000502394	KRTAP2-2	Q9BYT5	123 aa		5.36	□□□□□ -1.55
MATR3-231	ENST00000502394	MIR22HG	Q0VDD5	57 aa		5.32	□□□□□ -1.56
MATR3-231	ENST00000502394		A6NED7	52 aa		5.31	□□□□□ -1.56
MATR3-231	ENST00000502394		A6NN06	94 aa		5.3	□□□□□ -1.56
MATR3-231	ENST00000502394		A8MU10	97 aa		5.3	□□□□□ -1.56
MATR3-231	ENST00000502394	MT1B	P07438	61 aa		5.3	□□□□□ -1.56
MATR3-231	ENST00000502394	USH2A	O75445	5202 aa		5.29	□□□□□ -1.56
MATR3-231	ENST00000502394	LINC01554	Q52M75	96 aa		5.29	□□□□□ -1.56
MATR3-231	ENST00000502394		A0A0D9SG42	100 aa		5.27	□□□□□ -1.57
MATR3-231	ENST00000502394	CDC42SE1	Q9NRR8	79 aa		5.25	□□□□□ -1.57
MATR3-231	ENST00000502394	KRTAP12-1	P59990	96 aa		5.24	□□□□□ -1.57
MATR3-231	ENST00000502394	KRTAP12-2	P59991	146 aa		5.2	□□□□□ -1.58
MATR3-231	ENST00000502394	PLAC4	Q8WY50	150 aa		5.16	□□□□□ -1.58
MATR3-231	ENST00000502394	SSPO	A2VEC9	5147 aa		5.15	□□□□□ -1.58
MATR3-231	ENST00000502394	SPINT4	Q6UDR6	99 aa		5.15	□□□□□ -1.59
MATR3-231	ENST00000502394	BRK1	Q8WUW1	75 aa		5.13	□□□□□ -1.59
MATR3-231	ENST00000502394	KRTAP19-6	Q3LI70	58 aa		5.09	□□□□□ -1.59
MATR3-231	ENST00000502394	KRTAP10-7	P60409	375 aa	Predicted RBP	5.08	□□□□□ -1.6
MATR3-231	ENST00000502394	MT1X	P80297	61 aa		5.08	□□□□□ -1.6
MATR3-231	ENST00000502394		K7ERS5	55 aa		5.06	□□□□□ -1.6
MATR3-231	ENST00000502394	KRTAP10-5	P60370	271 aa		5.06	□□□□□ -1.6
MATR3-231	ENST00000502394	CAMK2N1	Q7Z7J9	78 aa		5.04	□□□□□ -1.6
MATR3-231	ENST00000502394	KRTAP5-11	Q6L8G4	156 aa		5.03	□□□□□ -1.6
MATR3-231	ENST00000502394	FSIP2	Q5CZC0	6907 aa		4.99	□□□□□ -1.61
MATR3-231	ENST00000502394	CRCT1	Q9UGL9	99 aa		4.98	□□□□□ -1.61
MATR3-231	ENST00000502394	C10orf95	Q9H7T3	257 aa		4.97	□□□□□ -1.61
MATR3-231	ENST00000502394	PRO2289	Q9P1D8	64 aa		4.97	□□□□□ -1.61
MATR3-231	ENST00000502394	PRO0628	Q9UI54	55 aa		4.97	□□□□□ -1.61
MATR3-231	ENST00000502394	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.96	□□□□□ -1.62
MATR3-231	ENST00000502394	SVIP	Q8NHG7	77 aa		4.96	□□□□□ -1.62
MATR3-231	ENST00000502394	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	4.95	□□□□□ -1.62
MATR3-231	ENST00000502394	MT3	P25713	68 aa		4.94	□□□□□ -1.62

Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms