RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 TRAV7A0A075B6U4 112 aa7.83□□□□□ -1.16
PRKCB-210ENST00000498739 A8MUN3 132 aa7.83□□□□□ -1.16
PRKCB-210ENST00000498739 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
PRKCB-210ENST00000498739 LCE2BO14633 110 aa7.8□□□□□ -1.16
PRKCB-210ENST00000498739 USH2AO75445 5202 aa7.76□□□□□ -1.17
PRKCB-210ENST00000498739 NDUFC1O43677 76 aa7.75□□□□□ -1.17
PRKCB-210ENST00000498739 DMAC1Q96GE9 116 aa7.71□□□□□ -1.18
PRKCB-210ENST00000498739 SNURFQ9Y675 71 aa7.68□□□□□ -1.18
PRKCB-210ENST00000498739 SERP2Q8N6R1 65 aa7.67□□□□□ -1.18
PRKCB-210ENST00000498739 C20orf197Q8N268 126 aa7.63□□□□□ -1.19
PRKCB-210ENST00000498739 SSPOA2VEC9 5147 aa7.63□□□□□ -1.19
PRKCB-210ENST00000498739 KRTAP19-1Q8IUB9 90 aa7.6□□□□□ -1.19
PRKCB-210ENST00000498739 H0YAA0 97 aa7.59□□□□□ -1.19
PRKCB-210ENST00000498739 ACYP2P14621 99 aa7.58□□□□□ -1.2
PRKCB-210ENST00000498739 ADM2Q7Z4H4 148 aa7.55□□□□□ -1.2
PRKCB-210ENST00000498739 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
PRKCB-210ENST00000498739 CRIPTQ9P021 101 aa7.52□□□□□ -1.21
PRKCB-210ENST00000498739 COX7CP15954 63 aa7.51□□□□□ -1.21
PRKCB-210ENST00000498739 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
PRKCB-210ENST00000498739 KRTAP19-6Q3LI70 58 aa7.48□□□□□ -1.21
PRKCB-210ENST00000498739 CHKB-CPT1BH3BT56 60 aa7.47□□□□□ -1.21
PRKCB-210ENST00000498739 Q5VV11 94 aa7.46□□□□□ -1.22
PRKCB-210ENST00000498739 KRTAP19-8Q3LI54 63 aa7.45□□□□□ -1.22
PRKCB-210ENST00000498739 SPTSSBQ8NFR3 76 aa7.44□□□□□ -1.22
PRKCB-210ENST00000498739 MT1BP07438 61 aa7.43□□□□□ -1.22
PRKCB-210ENST00000498739 FCGBPQ9Y6R7 5405 aaPredicted RBP7.42□□□□□ -1.22
PRKCB-210ENST00000498739 P0C880 135 aa7.4□□□□□ -1.22
PRKCB-210ENST00000498739 ANAPC13Q9BS18 74 aa7.4□□□□□ -1.22
PRKCB-210ENST00000498739 KRTAP3-2Q9BYR7 98 aa7.36□□□□□ -1.23
PRKCB-210ENST00000498739 CYSTM1Q9H1C7 97 aa7.35□□□□□ -1.23
PRKCB-210ENST00000498739 R4GN34 69 aa7.34□□□□□ -1.23
PRKCB-210ENST00000498739 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.33□□□□□ -1.24
PRKCB-210ENST00000498739 H7BZZ5 65 aa7.33□□□□□ -1.24
PRKCB-210ENST00000498739 COA5Q86WW8 74 aa7.31□□□□□ -1.24
PRKCB-210ENST00000498739 M0QZ58 72 aa7.3□□□□□ -1.24
PRKCB-210ENST00000498739 A6NN06 94 aa7.27□□□□□ -1.25
PRKCB-210ENST00000498739 CCDC179H3BU77 68 aa7.24□□□□□ -1.25
PRKCB-210ENST00000498739 KRTAP10-5P60370 271 aa7.2□□□□□ -1.26
PRKCB-210ENST00000498739 LINC01554Q52M75 96 aa7.19□□□□□ -1.26
PRKCB-210ENST00000498739 MACF1Q9UPN3 7388 aaKnown RBP7.17□□□□□ -1.26
PRKCB-210ENST00000498739 KRTAP9-7A8MTY7 169 aa7.17□□□□□ -1.26
PRKCB-210ENST00000498739 PLAC4Q8WY50 150 aa7.17□□□□□ -1.26
PRKCB-210ENST00000498739 SEC61GP60059 68 aa7.09□□□□□ -1.27
PRKCB-210ENST00000498739 SERP1Q9Y6X1 66 aa7.07□□□□□ -1.28
PRKCB-210ENST00000498739 SYNE2Q8WXH0 6885 aaKnown RBP7.07□□□□□ -1.28
PRKCB-210ENST00000498739 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
PRKCB-210ENST00000498739 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
PRKCB-210ENST00000498739 MT1XP80297 61 aa7.03□□□□□ -1.28
PRKCB-210ENST00000498739 KRTAP13-4Q3LI77 160 aa7.02□□□□□ -1.29
PRKCB-210ENST00000498739 TMEM258P61165 79 aa6.97□□□□□ -1.29
PRKCB-210ENST00000498739 KRTAP6-3Q3LI67 103 aa6.94□□□□□ -1.3
PRKCB-210ENST00000498739 A0A1B0GU33 70 aa6.93□□□□□ -1.3
PRKCB-210ENST00000498739 A0A1B0GU69 56 aa6.93□□□□□ -1.3
PRKCB-210ENST00000498739 SPATA8Q6RVD6 105 aa6.89□□□□□ -1.31
PRKCB-210ENST00000498739 A0A0D9SG42 100 aa6.86□□□□□ -1.31
PRKCB-210ENST00000498739 KRTAP12-2P59991 146 aa6.8□□□□□ -1.32
PRKCB-210ENST00000498739 CAMK2N1Q7Z7J9 78 aa6.8□□□□□ -1.32
PRKCB-210ENST00000498739 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
PRKCB-210ENST00000498739 LINC01558Q9Y6Z2 57 aa6.78□□□□□ -1.32
PRKCB-210ENST00000498739 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
PRKCB-210ENST00000498739 SMIM26A0A096LP01 95 aa6.73□□□□□ -1.33
PRKCB-210ENST00000498739 KRTAP10-7P60409 375 aaPredicted RBP6.73□□□□□ -1.33
PRKCB-210ENST00000498739 KRTAP5-9P26371 169 aa6.72□□□□□ -1.33
PRKCB-210ENST00000498739 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
PRKCB-210ENST00000498739 KMT2DO14686 5537 aa6.7□□□□□ -1.34
PRKCB-210ENST00000498739 A8MU10 97 aa6.69□□□□□ -1.34
PRKCB-210ENST00000498739 KRTAP8-1Q8IUC2 63 aa6.68□□□□□ -1.34
PRKCB-210ENST00000498739 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
PRKCB-210ENST00000498739 KRTAP4-8A0A0G2JLE6 195 aa6.65□□□□□ -1.34
PRKCB-210ENST00000498739 KRTAP4-8Q9BYQ9 185 aa6.65□□□□□ -1.34
PRKCB-210ENST00000498739 MUC12Q9UKN1 5478 aa6.61□□□□□ -1.35
PRKCB-210ENST00000498739 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
PRKCB-210ENST00000498739 NEBP20929 6669 aa6.61□□□□□ -1.35
PRKCB-210ENST00000498739 PCP4P48539 62 aa6.6□□□□□ -1.35
PRKCB-210ENST00000498739 UQCR11O14957 56 aa6.58□□□□□ -1.36
PRKCB-210ENST00000498739 V9GYY9 64 aa6.54□□□□□ -1.36
PRKCB-210ENST00000498739 Q1T7F1 81 aa6.5□□□□□ -1.37
PRKCB-210ENST00000498739 PSPHP1O15172 72 aa6.49□□□□□ -1.37
PRKCB-210ENST00000498739 MDN1Q9NU22 5596 aa6.48□□□□□ -1.37
PRKCB-210ENST00000498739 SPRR2EP22531 72 aa6.46□□□□□ -1.38
PRKCB-210ENST00000498739 SPRR2BP35325 72 aa6.46□□□□□ -1.38
PRKCB-210ENST00000498739 SPRR2AP35326 72 aa6.46□□□□□ -1.38
PRKCB-210ENST00000498739 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
PRKCB-210ENST00000498739 C10orf95Q9H7T3 257 aa6.39□□□□□ -1.39
PRKCB-210ENST00000498739 RPS28P62857 69 aaKnown RBP6.38□□□□□ -1.39
PRKCB-210ENST00000498739 LCE1AQ5T7P2 110 aa6.38□□□□□ -1.39
PRKCB-210ENST00000498739 TNP1P09430 55 aa6.32□□□□□ -1.4
PRKCB-210ENST00000498739 KRTAP20-1Q3LI63 56 aa6.32□□□□□ -1.4
PRKCB-210ENST00000498739 A6NED7 52 aa6.29□□□□□ -1.4
PRKCB-210ENST00000498739 K7ERS5 55 aa6.29□□□□□ -1.4
PRKCB-210ENST00000498739 KRTAP19-7Q3SYF9 63 aa6.27□□□□□ -1.41
PRKCB-210ENST00000498739 SPRR2DP22532 72 aa6.24□□□□□ -1.41
PRKCB-210ENST00000498739 MT1EP04732 61 aa6.21□□□□□ -1.42
PRKCB-210ENST00000498739 KRTAP2-3P0C7H8 128 aa6.21□□□□□ -1.42
PRKCB-210ENST00000498739 KRTAP19-5Q3LI72 72 aa6.21□□□□□ -1.42
PRKCB-210ENST00000498739 LCE3AQ5TA76 89 aa6.21□□□□□ -1.42
PRKCB-210ENST00000498739 KRTAP2-4Q9BYR9 128 aa6.21□□□□□ -1.42
PRKCB-210ENST00000498739 KRTAP19-3Q7Z4W3 81 aa6.11□□□□□ -1.43
PRKCB-210ENST00000498739 KRTAP25-1Q3LHN0 102 aa6.09□□□□□ -1.43
PRKCB-210ENST00000498739 LCE5AQ5TCM9 118 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms