RNA–Protein interactions for RNA: ENST00000498124.1

CDKN2A-208, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 880 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-208ENST00000498124 FAM236AA0A1B0GUQ0 79 aa10.74□□□□□ -0.69
CDKN2A-208ENST00000498124 FAM236BA0A1B0GV22 79 aa10.74□□□□□ -0.69
CDKN2A-208ENST00000498124 H3BPC8 53 aa10.71□□□□□ -0.69
CDKN2A-208ENST00000498124 SMIM20Q8N5G0 67 aa10.71□□□□□ -0.69
CDKN2A-208ENST00000498124 KRTAP3-1Q9BYR8 98 aa10.69□□□□□ -0.7
CDKN2A-208ENST00000498124 TRAV7A0A075B6U4 112 aa10.64□□□□□ -0.71
CDKN2A-208ENST00000498124 KLKP1Q107X0 134 aa10.59□□□□□ -0.71
CDKN2A-208ENST00000498124 S4R3F8 94 aa10.57□□□□□ -0.72
CDKN2A-208ENST00000498124 A8MUN3 132 aa10.51□□□□□ -0.73
CDKN2A-208ENST00000498124 LCA10Q71F78 164 aa10.48□□□□□ -0.73
CDKN2A-208ENST00000498124 CSAG1Q6PB30 78 aa10.45□□□□□ -0.74
CDKN2A-208ENST00000498124 SERP2Q8N6R1 65 aa10.45□□□□□ -0.74
CDKN2A-208ENST00000498124 KRTAP6-3Q3LI67 103 aa10.39□□□□□ -0.75
CDKN2A-208ENST00000498124 KRTAP3-3Q9BYR6 98 aa10.35□□□□□ -0.75
CDKN2A-208ENST00000498124 SNURFQ9Y675 71 aa10.35□□□□□ -0.75
CDKN2A-208ENST00000498124 DMAC1Q96GE9 116 aa10.34□□□□□ -0.75
CDKN2A-208ENST00000498124 NDUFC1O43677 76 aa10.33□□□□□ -0.76
CDKN2A-208ENST00000498124 C20orf197Q8N268 126 aa10.33□□□□□ -0.76
CDKN2A-208ENST00000498124 COX7CP15954 63 aa10.25□□□□□ -0.77
CDKN2A-208ENST00000498124 MT1BP07438 61 aa10.22□□□□□ -0.77
CDKN2A-208ENST00000498124 ACYP2P14621 99 aa10.2□□□□□ -0.78
CDKN2A-208ENST00000498124 SPANXA2-OT1Q8N9U9 137 aa10.19□□□□□ -0.78
CDKN2A-208ENST00000498124 NEBP20929 6669 aa10.17□□□□□ -0.78
CDKN2A-208ENST00000498124 ANAPC13Q9BS18 74 aa10.15□□□□□ -0.78
CDKN2A-208ENST00000498124 KRTAP19-8Q3LI54 63 aa10.14□□□□□ -0.79
CDKN2A-208ENST00000498124 SPRR2GQ9BYE4 73 aa10.14□□□□□ -0.79
CDKN2A-208ENST00000498124 A6NN06 94 aa10.11□□□□□ -0.79
CDKN2A-208ENST00000498124 Q5VV11 94 aa10.1□□□□□ -0.79
CDKN2A-208ENST00000498124 H0YAA0 97 aa10.09□□□□□ -0.79
CDKN2A-208ENST00000498124 MUC12Q9UKN1 5478 aa10.09□□□□□ -0.79
CDKN2A-208ENST00000498124 CHKB-CPT1BH3BT56 60 aa10.03□□□□□ -0.8
CDKN2A-208ENST00000498124 SPTSSBQ8NFR3 76 aa10.02□□□□□ -0.81
CDKN2A-208ENST00000498124 KRTAP10-5P60370 271 aa10.01□□□□□ -0.81
CDKN2A-208ENST00000498124 ADM2Q7Z4H4 148 aa9.99□□□□□ -0.81
CDKN2A-208ENST00000498124 H7BZZ5 65 aa9.98□□□□□ -0.81
CDKN2A-208ENST00000498124 CRIPTQ9P021 101 aa9.98□□□□□ -0.81
CDKN2A-208ENST00000498124 CYSTM1Q9H1C7 97 aa9.96□□□□□ -0.82
CDKN2A-208ENST00000498124 CCDC179H3BU77 68 aa9.9□□□□□ -0.82
CDKN2A-208ENST00000498124 COA5Q86WW8 74 aa9.86□□□□□ -0.83
CDKN2A-208ENST00000498124 KRTAP5-9P26371 169 aa9.85□□□□□ -0.83
CDKN2A-208ENST00000498124 KMT2DO14686 5537 aa9.84□□□□□ -0.83
CDKN2A-208ENST00000498124 P0C880 135 aa9.8□□□□□ -0.84
CDKN2A-208ENST00000498124 KRTAP3-2Q9BYR7 98 aa9.8□□□□□ -0.84
CDKN2A-208ENST00000498124 MDN1Q9NU22 5596 aa9.8□□□□□ -0.84
CDKN2A-208ENST00000498124 KRTAP20-1Q3LI63 56 aa9.73□□□□□ -0.85
CDKN2A-208ENST00000498124 R4GN34 69 aa9.71□□□□□ -0.86
CDKN2A-208ENST00000498124 ATP5EP56381 51 aaPredicted RBP9.7□□□□□ -0.86
CDKN2A-208ENST00000498124 M0QZ58 72 aa9.65□□□□□ -0.86
CDKN2A-208ENST00000498124 TMEM258P61165 79 aa9.59□□□□□ -0.87
CDKN2A-208ENST00000498124 SEC61GP60059 68 aa9.55□□□□□ -0.88
CDKN2A-208ENST00000498124 MT1XP80297 61 aa9.52□□□□□ -0.89
CDKN2A-208ENST00000498124 SERP1Q9Y6X1 66 aa9.52□□□□□ -0.89
CDKN2A-208ENST00000498124 LINC01554Q52M75 96 aa9.48□□□□□ -0.89
CDKN2A-208ENST00000498124 PLAC4Q8WY50 150 aa9.46□□□□□ -0.9
CDKN2A-208ENST00000498124 SPRR2FQ96RM1 72 aa9.44□□□□□ -0.9
CDKN2A-208ENST00000498124 PRO2289Q9P1D8 64 aa9.42□□□□□ -0.9
CDKN2A-208ENST00000498124 KRTAP2-3P0C7H8 128 aa9.39□□□□□ -0.91
CDKN2A-208ENST00000498124 KRTAP2-4Q9BYR9 128 aa9.39□□□□□ -0.91
CDKN2A-208ENST00000498124 A0A1B0GU69 56 aa9.36□□□□□ -0.91
CDKN2A-208ENST00000498124 SPRR2EP22531 72 aa9.36□□□□□ -0.91
CDKN2A-208ENST00000498124 SPRR2BP35325 72 aa9.36□□□□□ -0.91
CDKN2A-208ENST00000498124 SPRR2AP35326 72 aa9.36□□□□□ -0.91
CDKN2A-208ENST00000498124 KRTAP13-4Q3LI77 160 aa9.33□□□□□ -0.92
CDKN2A-208ENST00000498124 A0A1B0GU33 70 aa9.31□□□□□ -0.92
CDKN2A-208ENST00000498124 KRTAP12-2P59991 146 aa9.31□□□□□ -0.92
CDKN2A-208ENST00000498124 KRTAP8-1Q8IUC2 63 aa9.3□□□□□ -0.92
CDKN2A-208ENST00000498124 LCE1AQ5T7P2 110 aa9.25□□□□□ -0.93
CDKN2A-208ENST00000498124 PRR15LQ9BU68 103 aa9.25□□□□□ -0.93
CDKN2A-208ENST00000498124 PCP4P48539 62 aa9.24□□□□□ -0.93
CDKN2A-208ENST00000498124 LINC01558Q9Y6Z2 57 aa9.22□□□□□ -0.93
CDKN2A-208ENST00000498124 KRTAP4-8A0A0G2JLE6 195 aa9.18□□□□□ -0.94
CDKN2A-208ENST00000498124 SPATA8Q6RVD6 105 aa9.18□□□□□ -0.94
CDKN2A-208ENST00000498124 KRTAP4-8Q9BYQ9 185 aa9.18□□□□□ -0.94
CDKN2A-208ENST00000498124 A0A0D9SG42 100 aa9.13□□□□□ -0.95
CDKN2A-208ENST00000498124 KRTAP2-2Q9BYT5 123 aa9.08□□□□□ -0.96
CDKN2A-208ENST00000498124 KRTAP2-1Q9BYU5 128 aa9.08□□□□□ -0.96
CDKN2A-208ENST00000498124 SMIM26A0A096LP01 95 aa9.07□□□□□ -0.96
CDKN2A-208ENST00000498124 KRTAP10-7P60409 375 aaPredicted RBP9.07□□□□□ -0.96
CDKN2A-208ENST00000498124 SPRR2DP22532 72 aa9.05□□□□□ -0.96
CDKN2A-208ENST00000498124 CAMK2N1Q7Z7J9 78 aa9.02□□□□□ -0.97
CDKN2A-208ENST00000498124 V9GYY9 64 aa9.02□□□□□ -0.97
CDKN2A-208ENST00000498124 KRTAP10-12P60413 245 aa9.01□□□□□ -0.97
CDKN2A-208ENST00000498124 SPINT4Q6UDR6 99 aa8.98□□□□□ -0.97
CDKN2A-208ENST00000498124 KRTAP12-1P59990 96 aa8.95□□□□□ -0.98
CDKN2A-208ENST00000498124 A8MU10 97 aa8.94□□□□□ -0.98
CDKN2A-208ENST00000498124 UQCR11O14957 56 aa8.93□□□□□ -0.98
CDKN2A-208ENST00000498124 Q1T7F1 81 aa8.93□□□□□ -0.98
CDKN2A-208ENST00000498124 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
CDKN2A-208ENST00000498124 PSPHP1O15172 72 aa8.84□□□□□ -0.99
CDKN2A-208ENST00000498124 LCE3BQ5TA77 95 aa8.83□□□□□ -1
CDKN2A-208ENST00000498124 MIR22HGQ0VDD5 57 aa8.76□□□□□ -1.01
CDKN2A-208ENST00000498124 A6NED7 52 aa8.59□□□□□ -1.03
CDKN2A-208ENST00000498124 K7ERS5 55 aa8.55□□□□□ -1.04
CDKN2A-208ENST00000498124 KRTAP19-7Q3SYF9 63 aa8.52□□□□□ -1.05
CDKN2A-208ENST00000498124 C10orf95Q9H7T3 257 aa8.51□□□□□ -1.05
CDKN2A-208ENST00000498124 LCE5AQ5TCM9 118 aa8.48□□□□□ -1.05
CDKN2A-208ENST00000498124 DSTQ03001 7570 aaKnown RBP8.44□□□□□ -1.06
CDKN2A-208ENST00000498124 MT1EP04732 61 aa8.44□□□□□ -1.06
CDKN2A-208ENST00000498124 TNP1P09430 55 aa8.44□□□□□ -1.06
CDKN2A-208ENST00000498124 GPR98Q8WXG9 6306 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms