RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 IGHV6-1A0A0B4J1U7 121 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 K7ERU9 68 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 CRYGAP11844 174 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 NREPQ16612 68 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 DSCR8Q96T75 97 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 SS18L2Q9UHA2 77 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 DSTQ03001 7570 aaKnown RBP1.14□□□□□ -2.23
RIF1-212ENST00000498041 LRP1Q07954 4544 aaKnown RBP1.14□□□□□ -2.23
RIF1-212ENST00000498041 FAT1Q14517 4588 aa1.14□□□□□ -2.23
RIF1-212ENST00000498041 HSPG2P98160 4391 aa1.13□□□□□ -2.23
RIF1-212ENST00000498041 JMJD7-PLA2G4BH0Y9G9 81 aa1.13□□□□□ -2.23
RIF1-212ENST00000498041 FAM229BQ4G0N7 80 aa1.13□□□□□ -2.23
RIF1-212ENST00000498041 PCOTHQ58A44 107 aa1.13□□□□□ -2.23
RIF1-212ENST00000498041 LINC00643Q86TS7 51 aa1.13□□□□□ -2.23
RIF1-212ENST00000498041 COPS9Q8WXC6 57 aa1.13□□□□□ -2.23
RIF1-212ENST00000498041 HCG22E2RYF7 251 aa1.12□□□□□ -2.23
RIF1-212ENST00000498041 SNCGO76070 127 aa1.12□□□□□ -2.23
RIF1-212ENST00000498041 LYRM7Q5U5X0 104 aa1.12□□□□□ -2.23
RIF1-212ENST00000498041 PRR15Q8IV56 129 aa1.12□□□□□ -2.23
RIF1-212ENST00000498041 MDN1Q9NU22 5596 aa1.12□□□□□ -2.23
RIF1-212ENST00000498041 LPAP08519 4548 aa1.12□□□□□ -2.23
RIF1-212ENST00000498041 VPS13BQ7Z7G8 4022 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 CD164Q04900 197 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 ASB16-AS1Q495Z4 193 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 SSBP3-AS1Q7Z2R9 100 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 C20orf197Q8N268 126 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 ANAPC13Q9BS18 74 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 LINC00474Q9P2X8 69 aa1.11□□□□□ -2.23
RIF1-212ENST00000498041 USH2AO75445 5202 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 FAM240AA0A1B0GVK7 77 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 A8MWP4 228 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 F8WEM9 126 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 NDUFS5O43920 106 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 KRTAP19-2Q3LHN2 52 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 Q6Q795 121 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 CASC2Q6XLA1 102 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 UBL5Q9BZL1 73 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 FCGBPQ9Y6R7 5405 aaPredicted RBP1.1□□□□□ -2.23
RIF1-212ENST00000498041 MUC12Q9UKN1 5478 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 PKHD1P08F94 4074 aa1.1□□□□□ -2.23
RIF1-212ENST00000498041 MUC5ACP98088 5654 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 H0Y9P7 68 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 H3BQ85 93 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 ACYP1P07311 99 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 COX7CP15954 63 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 LINC00313P59037 77 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 LINC00208Q96KT6 92 aa1.09□□□□□ -2.23
RIF1-212ENST00000498041 MRPL34Q9BQ48 92 aaKnown RBP1.09□□□□□ -2.23
RIF1-212ENST00000498041 TNXBP22105 4242 aa1.09□□□□□ -2.24
RIF1-212ENST00000498041 hDV103S1A0JD37 113 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 H7BZZ5 65 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 J3QR89 54 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 C4orf26Q17RF5 130 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 KRTAP25-1Q3LHN0 102 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 SERP2Q8N6R1 65 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 TMEM254Q8TBM7 123 aa1.08□□□□□ -2.24
RIF1-212ENST00000498041 TRAV7A0A075B6U4 112 aa1.07□□□□□ -2.24
RIF1-212ENST00000498041 SCGB1A1P11684 91 aa1.07□□□□□ -2.24
RIF1-212ENST00000498041 ZNF706Q9Y5V0 76 aaPredicted RBP1.07□□□□□ -2.24
RIF1-212ENST00000498041 MYCBP2O75592 4640 aa1.07□□□□□ -2.24
RIF1-212ENST00000498041 SPINK1P00995 79 aa1.06□□□□□ -2.24
RIF1-212ENST00000498041 PDE6GP18545 87 aa1.06□□□□□ -2.24
RIF1-212ENST00000498041 KRTAP13-4Q3LI77 160 aa1.06□□□□□ -2.24
RIF1-212ENST00000498041 FP248Q71RG6 208 aaPredicted RBP1.06□□□□□ -2.24
RIF1-212ENST00000498041 CYP4F30PQ9H0H9 118 aa1.06□□□□□ -2.24
RIF1-212ENST00000498041 TRAV22A0A0B4J277 110 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 J3KT08 172 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 SPINK7P58062 85 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 Q5XG85 94 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 KRTAP5-10Q6L8G5 202 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 SMIM20Q8N5G0 67 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 IMUPQ9GZP8 106 aa1.05□□□□□ -2.24
RIF1-212ENST00000498041 ATOX1O00244 68 aa1.04□□□□□ -2.24
RIF1-212ENST00000498041 UQCRQO14949 82 aa1.04□□□□□ -2.24
RIF1-212ENST00000498041 RPL37P61927 97 aaKnown RBP1.04□□□□□ -2.24
RIF1-212ENST00000498041 C20orf166-AS1Q96NR2 134 aa1.04□□□□□ -2.24
RIF1-212ENST00000498041 NDUFB1O75438 58 aa1.03□□□□□ -2.24
RIF1-212ENST00000498041 ATP5EP2Q5VTU8 51 aa1.03□□□□□ -2.24
RIF1-212ENST00000498041 PRO0628Q9UI54 55 aa1.03□□□□□ -2.24
RIF1-212ENST00000498041 PKIGQ9Y2B9 76 aa1.03□□□□□ -2.24
RIF1-212ENST00000498041 MUC17Q685J3 4493 aa1.03□□□□□ -2.24
RIF1-212ENST00000498041 FAM236DA0A1B0GTK5 79 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 C8orf87E5RJ46 101 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 K7ERS5 55 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 FAM236CP0DP71 79 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 SPAG11AQ6PDA7 123 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 COA5Q86WW8 74 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 LRP2P98164 4655 aa1.02□□□□□ -2.25
RIF1-212ENST00000498041 A8MUN3 132 aa1.01□□□□□ -2.25
RIF1-212ENST00000498041 KRTAP12-1P59990 96 aa1.01□□□□□ -2.25
RIF1-212ENST00000498041 SPATA8Q6RVD6 105 aa1.01□□□□□ -2.25
RIF1-212ENST00000498041 LCA10Q71F78 164 aa1.01□□□□□ -2.25
RIF1-212ENST00000498041 LIMD2Q9BT23 127 aa1.01□□□□□ -2.25
RIF1-212ENST00000498041 A0A1B0GU33 70 aa1□□□□□ -2.25
RIF1-212ENST00000498041 A0A1B0GW54 56 aa1□□□□□ -2.25
RIF1-212ENST00000498041 MT1HP80294 61 aa1□□□□□ -2.25
RIF1-212ENST00000498041 C7orf65Q6ZTY9 151 aa1□□□□□ -2.25
RIF1-212ENST00000498041 MT1FP04733 61 aa0.99□□□□□ -2.25
RIF1-212ENST00000498041 MP68P56378 58 aa0.99□□□□□ -2.25
RIF1-212ENST00000498041 RPS29P62273 56 aaKnown RBP0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms