RNA–Protein interactions for RNA: ENST00000495520.5

LINC01558-202, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2 BASIC

Gene LINC01558, Length 1,652 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-202ENST00000495520 PRR15LQ9BU68 103 aa10.19□□□□□ -0.78
LINC01558-202ENST00000495520 SPTSSBQ8NFR3 76 aa10.15□□□□□ -0.78
LINC01558-202ENST00000495520 UBR4Q5T4S7 5183 aa10.13□□□□□ -0.79
LINC01558-202ENST00000495520 KRTAP4-1Q9BYQ7 146 aa10.12□□□□□ -0.79
LINC01558-202ENST00000495520 H1FX-AS1Q4G0G2 97 aa10.06□□□□□ -0.8
LINC01558-202ENST00000495520 RBM12B-AS1Q9P1G2 102 aa10.06□□□□□ -0.8
LINC01558-202ENST00000495520 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
LINC01558-202ENST00000495520 A0A1B0GU69 56 aa10.03□□□□□ -0.8
LINC01558-202ENST00000495520 LCA10Q71F78 164 aa10□□□□□ -0.81
LINC01558-202ENST00000495520 S4R3F8 94 aa9.99□□□□□ -0.81
LINC01558-202ENST00000495520 RNF213Q63HN8 5207 aa9.99□□□□□ -0.81
LINC01558-202ENST00000495520 MUC2Q02817 5179 aa9.98□□□□□ -0.81
LINC01558-202ENST00000495520 BRK1Q8WUW1 75 aa9.98□□□□□ -0.81
LINC01558-202ENST00000495520 A6NED7 52 aa9.9□□□□□ -0.82
LINC01558-202ENST00000495520 SEC61GP60059 68 aa9.9□□□□□ -0.82
LINC01558-202ENST00000495520 LCE2DQ5TA82 110 aaPredicted RBP9.89□□□□□ -0.83
LINC01558-202ENST00000495520 KRTAP19-2Q3LHN2 52 aa9.87□□□□□ -0.83
LINC01558-202ENST00000495520 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
LINC01558-202ENST00000495520 A8MU10 97 aa9.79□□□□□ -0.84
LINC01558-202ENST00000495520 UQCR11O14957 56 aa9.78□□□□□ -0.84
LINC01558-202ENST00000495520 CSAG1Q6PB30 78 aa9.77□□□□□ -0.85
LINC01558-202ENST00000495520 SPATA8Q6RVD6 105 aa9.75□□□□□ -0.85
LINC01558-202ENST00000495520 KRTAP3-2Q9BYR7 98 aa9.74□□□□□ -0.85
LINC01558-202ENST00000495520 KRTAP10-6P60371 365 aaPredicted RBP9.74□□□□□ -0.85
LINC01558-202ENST00000495520 A0A1B0GU33 70 aa9.71□□□□□ -0.86
LINC01558-202ENST00000495520 MIR22HGQ0VDD5 57 aa9.69□□□□□ -0.86
LINC01558-202ENST00000495520 PMAIP1Q13794 54 aa9.67□□□□□ -0.86
LINC01558-202ENST00000495520 LCE2CQ5TA81 110 aa9.67□□□□□ -0.86
LINC01558-202ENST00000495520 FLGP20930 4061 aaPredicted RBP9.67□□□□□ -0.86
LINC01558-202ENST00000495520 FAT4Q6V0I7 4981 aa9.64□□□□□ -0.87
LINC01558-202ENST00000495520 H0YAA0 97 aa9.64□□□□□ -0.87
LINC01558-202ENST00000495520 P0C880 135 aa9.58□□□□□ -0.88
LINC01558-202ENST00000495520 ADM2Q7Z4H4 148 aa9.58□□□□□ -0.88
LINC01558-202ENST00000495520 MT1HP80294 61 aa9.51□□□□□ -0.89
LINC01558-202ENST00000495520 KRTAP13-4Q3LI77 160 aa9.47□□□□□ -0.89
LINC01558-202ENST00000495520 M0R2T5 61 aa9.45□□□□□ -0.9
LINC01558-202ENST00000495520 KTN1-AS1Q86SY8 53 aa9.42□□□□□ -0.9
LINC01558-202ENST00000495520 A6NN06 94 aa9.4□□□□□ -0.9
LINC01558-202ENST00000495520 M0QZ58 72 aa9.37□□□□□ -0.91
LINC01558-202ENST00000495520 LCE2AQ5TA79 106 aaPredicted RBP9.32□□□□□ -0.92
LINC01558-202ENST00000495520 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
LINC01558-202ENST00000495520 A0A0D9SG42 100 aa9.23□□□□□ -0.93
LINC01558-202ENST00000495520 R4GN34 69 aa9.2□□□□□ -0.94
LINC01558-202ENST00000495520 K7ERS5 55 aa9.17□□□□□ -0.94
LINC01558-202ENST00000495520 CRIPTQ9P021 101 aa9.13□□□□□ -0.95
LINC01558-202ENST00000495520 KRTAP12-1P59990 96 aa9.12□□□□□ -0.95
LINC01558-202ENST00000495520 KRTAP9-8Q9BYQ0 159 aa9.1□□□□□ -0.95
LINC01558-202ENST00000495520 KRTAP12-2P59991 146 aa9.09□□□□□ -0.95
LINC01558-202ENST00000495520 MT2AP02795 61 aa9.07□□□□□ -0.96
LINC01558-202ENST00000495520 MT1FP04733 61 aa9.01□□□□□ -0.97
LINC01558-202ENST00000495520 KRTAP10-10P60014 251 aa9□□□□□ -0.97
LINC01558-202ENST00000495520 LINC01554Q52M75 96 aa9□□□□□ -0.97
LINC01558-202ENST00000495520 SPINT4Q6UDR6 99 aa9□□□□□ -0.97
LINC01558-202ENST00000495520 SPRR2GQ9BYE4 73 aa8.91□□□□□ -0.98
LINC01558-202ENST00000495520 ROMO1P60602 79 aa8.88□□□□□ -0.99
LINC01558-202ENST00000495520 KRTAP19-1Q8IUB9 90 aa8.87□□□□□ -0.99
LINC01558-202ENST00000495520 PRAC1Q96KF2 57 aa8.8□□□□□ -1
LINC01558-202ENST00000495520 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
LINC01558-202ENST00000495520 KRTAP19-8Q3LI54 63 aa8.66□□□□□ -1.02
LINC01558-202ENST00000495520 C10orf95Q9H7T3 257 aa8.63□□□□□ -1.03
LINC01558-202ENST00000495520 CAMK2N1Q7Z7J9 78 aa8.62□□□□□ -1.03
LINC01558-202ENST00000495520 LCE2BO14633 110 aa8.6□□□□□ -1.03
LINC01558-202ENST00000495520 KRTAP25-1Q3LHN0 102 aa8.59□□□□□ -1.03
LINC01558-202ENST00000495520 PLAC4Q8WY50 150 aa8.58□□□□□ -1.04
LINC01558-202ENST00000495520 MT1BP07438 61 aa8.52□□□□□ -1.05
LINC01558-202ENST00000495520 LOC100996750A0A140TA64 210 aa8.46□□□□□ -1.05
LINC01558-202ENST00000495520 KRTAP4-6Q9BYQ5 205 aa8.46□□□□□ -1.05
LINC01558-202ENST00000495520 USH2AO75445 5202 aa8.44□□□□□ -1.06
LINC01558-202ENST00000495520 KRTAP9-2Q9BYQ4 174 aa8.42□□□□□ -1.06
LINC01558-202ENST00000495520 FSIP2Q5CZC0 6907 aa8.32□□□□□ -1.08
LINC01558-202ENST00000495520 TNP1P09430 55 aa8.28□□□□□ -1.08
LINC01558-202ENST00000495520 KRTAP10-5P60370 271 aa8.27□□□□□ -1.08
LINC01558-202ENST00000495520 MT1XP80297 61 aa8.27□□□□□ -1.08
LINC01558-202ENST00000495520 H3BS24 57 aa8.24□□□□□ -1.09
LINC01558-202ENST00000495520 SSPOA2VEC9 5147 aa8.24□□□□□ -1.09
LINC01558-202ENST00000495520 KRTAP23-1A1A580 65 aa8.18□□□□□ -1.1
LINC01558-202ENST00000495520 PP632Q6XCG6 107 aa8.18□□□□□ -1.1
LINC01558-202ENST00000495520 KRTAP19-6Q3LI70 58 aa8.12□□□□□ -1.11
LINC01558-202ENST00000495520 PRO2289Q9P1D8 64 aa8.1□□□□□ -1.11
LINC01558-202ENST00000495520 CRCT1Q9UGL9 99 aa8.07□□□□□ -1.12
LINC01558-202ENST00000495520 KRTAP10-7P60409 375 aaPredicted RBP7.93□□□□□ -1.14
LINC01558-202ENST00000495520 LCE3AQ5TA76 89 aa7.91□□□□□ -1.14
LINC01558-202ENST00000495520 FCGBPQ9Y6R7 5405 aaPredicted RBP7.89□□□□□ -1.15
LINC01558-202ENST00000495520 KRTAP9-6A0A140TA67 174 aa7.86□□□□□ -1.15
LINC01558-202ENST00000495520 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
LINC01558-202ENST00000495520 KRTAP8-1Q8IUC2 63 aa7.82□□□□□ -1.16
LINC01558-202ENST00000495520 KRTAP15-1Q3LI76 137 aa7.72□□□□□ -1.17
LINC01558-202ENST00000495520 KRTAP12-3P60328 96 aa7.6□□□□□ -1.19
LINC01558-202ENST00000495520 MACF1Q9UPN3 7388 aaKnown RBP7.58□□□□□ -1.2
LINC01558-202ENST00000495520 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
LINC01558-202ENST00000495520 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
LINC01558-202ENST00000495520 KMT2DO14686 5537 aa7.56□□□□□ -1.2
LINC01558-202ENST00000495520 KRTAP19-5Q3LI72 72 aa7.5□□□□□ -1.21
LINC01558-202ENST00000495520 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
LINC01558-202ENST00000495520 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.48□□□□□ -1.21
LINC01558-202ENST00000495520 KRTAP19-7Q3SYF9 63 aa7.4□□□□□ -1.23
LINC01558-202ENST00000495520 SYNE2Q8WXH0 6885 aaKnown RBP7.39□□□□□ -1.23
LINC01558-202ENST00000495520 SPRR5A0A1B0GTR4 108 aa7.39□□□□□ -1.23
LINC01558-202ENST00000495520 MT1EP04732 61 aa7.24□□□□□ -1.25
LINC01558-202ENST00000495520 SPRR2FQ96RM1 72 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms