RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
SLC13A3-211ENST00000495082 V9GYY9 64 aa5.79□□□□□ -1.48
SLC13A3-211ENST00000495082 H1FX-AS1Q4G0G2 97 aa5.75□□□□□ -1.49
SLC13A3-211ENST00000495082 PSPHP1O15172 72 aa5.73□□□□□ -1.49
SLC13A3-211ENST00000495082 LINC01558Q9Y6Z2 57 aa5.72□□□□□ -1.49
SLC13A3-211ENST00000495082 LCE2CQ5TA81 110 aa5.71□□□□□ -1.5
SLC13A3-211ENST00000495082 PRR15LQ9BU68 103 aa5.69□□□□□ -1.5
SLC13A3-211ENST00000495082 Q5VV11 94 aa5.68□□□□□ -1.5
SLC13A3-211ENST00000495082 FAT4Q6V0I7 4981 aa5.68□□□□□ -1.5
SLC13A3-211ENST00000495082 S4R3F8 94 aa5.66□□□□□ -1.5
SLC13A3-211ENST00000495082 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.5
SLC13A3-211ENST00000495082 LCA10Q71F78 164 aa5.64□□□□□ -1.51
SLC13A3-211ENST00000495082 SPTSSBQ8NFR3 76 aa5.63□□□□□ -1.51
SLC13A3-211ENST00000495082 KRTAP3-3Q9BYR6 98 aa5.62□□□□□ -1.51
SLC13A3-211ENST00000495082 A0A1B0GU69 56 aa5.6□□□□□ -1.51
SLC13A3-211ENST00000495082 MT1HP80294 61 aa5.6□□□□□ -1.51
SLC13A3-211ENST00000495082 BRK1Q8WUW1 75 aa5.58□□□□□ -1.52
SLC13A3-211ENST00000495082 CSAG1Q6PB30 78 aa5.56□□□□□ -1.52
SLC13A3-211ENST00000495082 SEC61GP60059 68 aa5.55□□□□□ -1.52
SLC13A3-211ENST00000495082 PRO0628Q9UI54 55 aa5.55□□□□□ -1.52
SLC13A3-211ENST00000495082 A6NED7 52 aa5.54□□□□□ -1.52
SLC13A3-211ENST00000495082 H3BS24 57 aa5.54□□□□□ -1.52
SLC13A3-211ENST00000495082 M0R2T5 61 aa5.52□□□□□ -1.53
SLC13A3-211ENST00000495082 LCE2AQ5TA79 106 aaPredicted RBP5.49□□□□□ -1.53
SLC13A3-211ENST00000495082 A8MU10 97 aa5.47□□□□□ -1.53
SLC13A3-211ENST00000495082 CDC42SE1Q9NRR8 79 aa5.46□□□□□ -1.54
SLC13A3-211ENST00000495082 H0YAA0 97 aa5.45□□□□□ -1.54
SLC13A3-211ENST00000495082 UQCR11O14957 56 aa5.45□□□□□ -1.54
SLC13A3-211ENST00000495082 KRTAP10-6P60371 365 aaPredicted RBP5.41□□□□□ -1.54
SLC13A3-211ENST00000495082 SPATA8Q6RVD6 105 aa5.41□□□□□ -1.54
SLC13A3-211ENST00000495082 MIR22HGQ0VDD5 57 aa5.4□□□□□ -1.55
SLC13A3-211ENST00000495082 A0A1B0GU33 70 aa5.39□□□□□ -1.55
SLC13A3-211ENST00000495082 LORP23490 312 aaPredicted RBP5.39□□□□□ -1.55
SLC13A3-211ENST00000495082 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
SLC13A3-211ENST00000495082 A0A0A0MQY5 61 aa5.38□□□□□ -1.55
SLC13A3-211ENST00000495082 ADM2Q7Z4H4 148 aa5.38□□□□□ -1.55
SLC13A3-211ENST00000495082 KRTAP9-8Q9BYQ0 159 aa5.37□□□□□ -1.55
SLC13A3-211ENST00000495082 MT2AP02795 61 aa5.34□□□□□ -1.55
SLC13A3-211ENST00000495082 P0C880 135 aa5.33□□□□□ -1.56
SLC13A3-211ENST00000495082 MT1FP04733 61 aa5.3□□□□□ -1.56
SLC13A3-211ENST00000495082 KRTAP10-10P60014 251 aa5.28□□□□□ -1.56
SLC13A3-211ENST00000495082 PMAIP1Q13794 54 aa5.28□□□□□ -1.56
SLC13A3-211ENST00000495082 CRIPTQ9P021 101 aa5.27□□□□□ -1.57
SLC13A3-211ENST00000495082 KRTAP9-2Q9BYQ4 174 aa5.26□□□□□ -1.57
SLC13A3-211ENST00000495082 KRTAP13-4Q3LI77 160 aa5.26□□□□□ -1.57
SLC13A3-211ENST00000495082 A6NN06 94 aa5.23□□□□□ -1.57
SLC13A3-211ENST00000495082 M0QZ58 72 aa5.22□□□□□ -1.57
SLC13A3-211ENST00000495082 R4GN34 69 aa5.21□□□□□ -1.58
SLC13A3-211ENST00000495082 KRTAP9-3Q9BYQ3 159 aa5.19□□□□□ -1.58
SLC13A3-211ENST00000495082 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
SLC13A3-211ENST00000495082 KRTAP19-1Q8IUB9 90 aa5.17□□□□□ -1.58
SLC13A3-211ENST00000495082 A0A0D9SG42 100 aa5.16□□□□□ -1.58
SLC13A3-211ENST00000495082 K7ERS5 55 aa5.11□□□□□ -1.59
SLC13A3-211ENST00000495082 KRTAP9-6A0A140TA67 174 aa5.11□□□□□ -1.59
SLC13A3-211ENST00000495082 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
SLC13A3-211ENST00000495082 KRTAP19-8Q3LI54 63 aa5.07□□□□□ -1.6
SLC13A3-211ENST00000495082 LINC01554Q52M75 96 aa5.07□□□□□ -1.6
SLC13A3-211ENST00000495082 LCE2DQ5TA82 110 aaPredicted RBP5.06□□□□□ -1.6
SLC13A3-211ENST00000495082 LCE2BO14633 110 aa5.05□□□□□ -1.6
SLC13A3-211ENST00000495082 KRTAP12-1P59990 96 aa5.05□□□□□ -1.6
SLC13A3-211ENST00000495082 KRTAP12-2P59991 146 aa5.05□□□□□ -1.6
SLC13A3-211ENST00000495082 SPINT4Q6UDR6 99 aa5.03□□□□□ -1.6
SLC13A3-211ENST00000495082 MT1BP07438 61 aa4.99□□□□□ -1.61
SLC13A3-211ENST00000495082 CRCT1Q9UGL9 99 aa4.96□□□□□ -1.62
SLC13A3-211ENST00000495082 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
SLC13A3-211ENST00000495082 PLAC4Q8WY50 150 aa4.95□□□□□ -1.62
SLC13A3-211ENST00000495082 USH2AO75445 5202 aa4.95□□□□□ -1.62
SLC13A3-211ENST00000495082 ROMO1P60602 79 aa4.94□□□□□ -1.62
SLC13A3-211ENST00000495082 PRAC1Q96KF2 57 aa4.93□□□□□ -1.62
SLC13A3-211ENST00000495082 CAMK2N1Q7Z7J9 78 aa4.86□□□□□ -1.63
SLC13A3-211ENST00000495082 SSPOA2VEC9 5147 aa4.84□□□□□ -1.63
SLC13A3-211ENST00000495082 MT1XP80297 61 aa4.8□□□□□ -1.64
SLC13A3-211ENST00000495082 KRTAP19-6Q3LI70 58 aa4.8□□□□□ -1.64
SLC13A3-211ENST00000495082 KRTAP10-5P60370 271 aa4.79□□□□□ -1.64
SLC13A3-211ENST00000495082 KRTAP25-1Q3LHN0 102 aa4.79□□□□□ -1.64
SLC13A3-211ENST00000495082 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
SLC13A3-211ENST00000495082 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
SLC13A3-211ENST00000495082 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
SLC13A3-211ENST00000495082 FCGBPQ9Y6R7 5405 aaPredicted RBP4.66□□□□□ -1.66
SLC13A3-211ENST00000495082 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.62□□□□□ -1.67
SLC13A3-211ENST00000495082 TNP1P09430 55 aa4.61□□□□□ -1.67
SLC13A3-211ENST00000495082 KRTAP9-7A8MTY7 169 aa4.58□□□□□ -1.68
SLC13A3-211ENST00000495082 KRTAP10-7P60409 375 aaPredicted RBP4.58□□□□□ -1.68
SLC13A3-211ENST00000495082 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
SLC13A3-211ENST00000495082 PP632Q6XCG6 107 aa4.52□□□□□ -1.69
SLC13A3-211ENST00000495082 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
SLC13A3-211ENST00000495082 KMT2DO14686 5537 aa4.48□□□□□ -1.69
SLC13A3-211ENST00000495082 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
SLC13A3-211ENST00000495082 LCE3AQ5TA76 89 aa4.43□□□□□ -1.7
SLC13A3-211ENST00000495082 KRTAP4-8Q9BYQ9 185 aa4.43□□□□□ -1.7
SLC13A3-211ENST00000495082 SYNE2Q8WXH0 6885 aaKnown RBP4.41□□□□□ -1.7
SLC13A3-211ENST00000495082 KRTAP8-1Q8IUC2 63 aa4.37□□□□□ -1.71
SLC13A3-211ENST00000495082 KRTAP6-3Q3LI67 103 aa4.29□□□□□ -1.72
SLC13A3-211ENST00000495082 KRTAP19-5Q3LI72 72 aa4.29□□□□□ -1.72
SLC13A3-211ENST00000495082 KRTAP19-7Q3SYF9 63 aa4.28□□□□□ -1.72
SLC13A3-211ENST00000495082 KRTAP12-3P60328 96 aa4.27□□□□□ -1.73
SLC13A3-211ENST00000495082 KRTAP15-1Q3LI76 137 aa4.27□□□□□ -1.73
SLC13A3-211ENST00000495082 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
SLC13A3-211ENST00000495082 SPRR2FQ96RM1 72 aa4.24□□□□□ -1.73
SLC13A3-211ENST00000495082 MT1EP04732 61 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms