RNA–Protein interactions for RNA: ENST00000494893.5

SNX17-209, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 966 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-209ENST00000494893 SPANXA2-OT1Q8N9U9 137 aa8.36□□□□□ -1.07
SNX17-209ENST00000494893 MT2AP02795 61 aa8.33□□□□□ -1.08
SNX17-209ENST00000494893 KRTAP3-1Q9BYR8 98 aa8.31□□□□□ -1.08
SNX17-209ENST00000494893 H1FX-AS1Q4G0G2 97 aa8.28□□□□□ -1.08
SNX17-209ENST00000494893 A8MUN3 132 aa8.27□□□□□ -1.09
SNX17-209ENST00000494893 MT1FP04733 61 aa8.27□□□□□ -1.09
SNX17-209ENST00000494893 DMAC1Q96GE9 116 aa8.27□□□□□ -1.09
SNX17-209ENST00000494893 TMEM258P61165 79 aa8.26□□□□□ -1.09
SNX17-209ENST00000494893 ATP5EP56381 51 aaPredicted RBP8.22□□□□□ -1.09
SNX17-209ENST00000494893 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.1
SNX17-209ENST00000494893 ACYP2P14621 99 aa8.2□□□□□ -1.1
SNX17-209ENST00000494893 FSIP2Q5CZC0 6907 aa8.18□□□□□ -1.1
SNX17-209ENST00000494893 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
SNX17-209ENST00000494893 KRTAP9-3Q9BYQ3 159 aa8.16□□□□□ -1.1
SNX17-209ENST00000494893 USH2AO75445 5202 aa8.12□□□□□ -1.11
SNX17-209ENST00000494893 S4R3F8 94 aa8.1□□□□□ -1.11
SNX17-209ENST00000494893 LCE2BO14633 110 aa8.09□□□□□ -1.11
SNX17-209ENST00000494893 COA5Q86WW8 74 aa8.08□□□□□ -1.12
SNX17-209ENST00000494893 LCA10Q71F78 164 aa8.06□□□□□ -1.12
SNX17-209ENST00000494893 CHKB-CPT1BH3BT56 60 aa8.04□□□□□ -1.12
SNX17-209ENST00000494893 KRTAP3-3Q9BYR6 98 aa8.03□□□□□ -1.12
SNX17-209ENST00000494893 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
SNX17-209ENST00000494893 SERP1Q9Y6X1 66 aa8.01□□□□□ -1.13
SNX17-209ENST00000494893 CSAG1Q6PB30 78 aa7.96□□□□□ -1.14
SNX17-209ENST00000494893 SPTSSBQ8NFR3 76 aa7.95□□□□□ -1.14
SNX17-209ENST00000494893 RPS28P62857 69 aaKnown RBP7.9□□□□□ -1.14
SNX17-209ENST00000494893 KRTAP19-1Q8IUB9 90 aa7.84□□□□□ -1.15
SNX17-209ENST00000494893 FCGBPQ9Y6R7 5405 aaPredicted RBP7.79□□□□□ -1.16
SNX17-209ENST00000494893 SMIM26A0A096LP01 95 aa7.77□□□□□ -1.17
SNX17-209ENST00000494893 H0YAA0 97 aa7.77□□□□□ -1.17
SNX17-209ENST00000494893 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
SNX17-209ENST00000494893 ADM2Q7Z4H4 148 aa7.71□□□□□ -1.18
SNX17-209ENST00000494893 SPRR2GQ9BYE4 73 aa7.71□□□□□ -1.18
SNX17-209ENST00000494893 LINC01558Q9Y6Z2 57 aa7.71□□□□□ -1.18
SNX17-209ENST00000494893 KRTAP3-2Q9BYR7 98 aa7.69□□□□□ -1.18
SNX17-209ENST00000494893 SEC61GP60059 68 aa7.67□□□□□ -1.18
SNX17-209ENST00000494893 Q1T7F1 81 aa7.67□□□□□ -1.18
SNX17-209ENST00000494893 V9GYY9 64 aa7.67□□□□□ -1.18
SNX17-209ENST00000494893 MT1BP07438 61 aa7.66□□□□□ -1.18
SNX17-209ENST00000494893 KRTAP19-8Q3LI54 63 aa7.66□□□□□ -1.18
SNX17-209ENST00000494893 A0A1B0GU69 56 aa7.65□□□□□ -1.18
SNX17-209ENST00000494893 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.65□□□□□ -1.18
SNX17-209ENST00000494893 P0C880 135 aa7.63□□□□□ -1.19
SNX17-209ENST00000494893 PRR15LQ9BU68 103 aa7.6□□□□□ -1.19
SNX17-209ENST00000494893 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
SNX17-209ENST00000494893 KRTAP9-7A8MTY7 169 aa7.57□□□□□ -1.2
SNX17-209ENST00000494893 Q5VV11 94 aa7.56□□□□□ -1.2
SNX17-209ENST00000494893 PSPHP1O15172 72 aa7.52□□□□□ -1.21
SNX17-209ENST00000494893 A0A1B0GU33 70 aa7.5□□□□□ -1.21
SNX17-209ENST00000494893 M0QZ58 72 aa7.44□□□□□ -1.22
SNX17-209ENST00000494893 R4GN34 69 aa7.44□□□□□ -1.22
SNX17-209ENST00000494893 MACF1Q9UPN3 7388 aaKnown RBP7.41□□□□□ -1.22
SNX17-209ENST00000494893 KRTAP10-5P60370 271 aa7.41□□□□□ -1.22
SNX17-209ENST00000494893 A6NN06 94 aa7.4□□□□□ -1.22
SNX17-209ENST00000494893 KRTAP13-4Q3LI77 160 aa7.39□□□□□ -1.23
SNX17-209ENST00000494893 UQCR11O14957 56 aa7.37□□□□□ -1.23
SNX17-209ENST00000494893 SPATA8Q6RVD6 105 aa7.36□□□□□ -1.23
SNX17-209ENST00000494893 A6NED7 52 aa7.3□□□□□ -1.24
SNX17-209ENST00000494893 MIR22HGQ0VDD5 57 aa7.28□□□□□ -1.24
SNX17-209ENST00000494893 LINC01554Q52M75 96 aa7.28□□□□□ -1.24
SNX17-209ENST00000494893 SYNE2Q8WXH0 6885 aaKnown RBP7.26□□□□□ -1.25
SNX17-209ENST00000494893 A0A0D9SG42 100 aa7.23□□□□□ -1.25
SNX17-209ENST00000494893 A8MU10 97 aa7.22□□□□□ -1.25
SNX17-209ENST00000494893 MT1XP80297 61 aa7.22□□□□□ -1.25
SNX17-209ENST00000494893 KRTAP6-3Q3LI67 103 aa7.21□□□□□ -1.26
SNX17-209ENST00000494893 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
SNX17-209ENST00000494893 CDC42SE1Q9NRR8 79 aa7.14□□□□□ -1.27
SNX17-209ENST00000494893 KRTAP12-1P59990 96 aa7.12□□□□□ -1.27
SNX17-209ENST00000494893 PRO2289Q9P1D8 64 aa7.09□□□□□ -1.27
SNX17-209ENST00000494893 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
SNX17-209ENST00000494893 KRTAP12-2P59991 146 aa7.07□□□□□ -1.28
SNX17-209ENST00000494893 BRK1Q8WUW1 75 aa7.04□□□□□ -1.28
SNX17-209ENST00000494893 K7ERS5 55 aa6.99□□□□□ -1.29
SNX17-209ENST00000494893 KRTAP5-9P26371 169 aa6.98□□□□□ -1.29
SNX17-209ENST00000494893 KMT2DO14686 5537 aa6.96□□□□□ -1.3
SNX17-209ENST00000494893 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
SNX17-209ENST00000494893 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
SNX17-209ENST00000494893 KRTAP10-7P60409 375 aaPredicted RBP6.89□□□□□ -1.31
SNX17-209ENST00000494893 KRTAP4-8A0A0G2JLE6 195 aa6.85□□□□□ -1.31
SNX17-209ENST00000494893 KRTAP4-8Q9BYQ9 185 aa6.85□□□□□ -1.31
SNX17-209ENST00000494893 NEBP20929 6669 aa6.85□□□□□ -1.31
SNX17-209ENST00000494893 KRTAP10-12P60413 245 aa6.84□□□□□ -1.31
SNX17-209ENST00000494893 KRTAP8-1Q8IUC2 63 aa6.81□□□□□ -1.32
SNX17-209ENST00000494893 MDN1Q9NU22 5596 aa6.8□□□□□ -1.32
SNX17-209ENST00000494893 SPRR2FQ96RM1 72 aa6.78□□□□□ -1.32
SNX17-209ENST00000494893 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
SNX17-209ENST00000494893 C10orf95Q9H7T3 257 aa6.75□□□□□ -1.33
SNX17-209ENST00000494893 ROMO1P60602 79 aa6.67□□□□□ -1.34
SNX17-209ENST00000494893 PMAIP1Q13794 54 aa6.66□□□□□ -1.34
SNX17-209ENST00000494893 SPRR2EP22531 72 aa6.63□□□□□ -1.35
SNX17-209ENST00000494893 SPRR2BP35325 72 aa6.63□□□□□ -1.35
SNX17-209ENST00000494893 SPRR2AP35326 72 aa6.63□□□□□ -1.35
SNX17-209ENST00000494893 LCE1AQ5T7P2 110 aa6.62□□□□□ -1.35
SNX17-209ENST00000494893 TNP1P09430 55 aa6.59□□□□□ -1.35
SNX17-209ENST00000494893 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
SNX17-209ENST00000494893 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
SNX17-209ENST00000494893 KRTAP19-7Q3SYF9 63 aa6.46□□□□□ -1.38
SNX17-209ENST00000494893 KRTAP2-3P0C7H8 128 aa6.44□□□□□ -1.38
SNX17-209ENST00000494893 KRTAP2-4Q9BYR9 128 aa6.44□□□□□ -1.38
SNX17-209ENST00000494893 SPRR2DP22532 72 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms