RNA–Protein interactions for RNA: ENST00000494649.5

APTX-230, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-230ENST00000494649 H3BPC8 53 aa5.23□□□□□ -1.57
APTX-230ENST00000494649 KRTAP3-3Q9BYR6 98 aa5.22□□□□□ -1.57
APTX-230ENST00000494649 CSAG1Q6PB30 78 aa5.22□□□□□ -1.57
APTX-230ENST00000494649 SMIM20Q8N5G0 67 aa5.22□□□□□ -1.57
APTX-230ENST00000494649 USH2AO75445 5202 aa5.21□□□□□ -1.57
APTX-230ENST00000494649 SNURFQ9Y675 71 aa5.21□□□□□ -1.58
APTX-230ENST00000494649 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
APTX-230ENST00000494649 LCE2BO14633 110 aa5.17□□□□□ -1.58
APTX-230ENST00000494649 A8MUN3 132 aa5.16□□□□□ -1.58
APTX-230ENST00000494649 C20orf197Q8N268 126 aa5.16□□□□□ -1.58
APTX-230ENST00000494649 NDUFC1O43677 76 aa5.15□□□□□ -1.59
APTX-230ENST00000494649 SERP2Q8N6R1 65 aa5.15□□□□□ -1.59
APTX-230ENST00000494649 COX7CP15954 63 aa5.14□□□□□ -1.59
APTX-230ENST00000494649 DMAC1Q96GE9 116 aa5.14□□□□□ -1.59
APTX-230ENST00000494649 CCDC179H3BU77 68 aa5.11□□□□□ -1.59
APTX-230ENST00000494649 SSPOA2VEC9 5147 aa5.1□□□□□ -1.59
APTX-230ENST00000494649 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.05□□□□□ -1.6
APTX-230ENST00000494649 ACYP2P14621 99 aa5.04□□□□□ -1.6
APTX-230ENST00000494649 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
APTX-230ENST00000494649 KRTAP19-1Q8IUB9 90 aa5.04□□□□□ -1.6
APTX-230ENST00000494649 CYSTM1Q9H1C7 97 aa5.03□□□□□ -1.6
APTX-230ENST00000494649 KRTAP9-7A8MTY7 169 aa5.03□□□□□ -1.6
APTX-230ENST00000494649 CHKB-CPT1BH3BT56 60 aa5□□□□□ -1.61
APTX-230ENST00000494649 TMEM258P61165 79 aa4.99□□□□□ -1.61
APTX-230ENST00000494649 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
APTX-230ENST00000494649 H0YAA0 97 aa4.98□□□□□ -1.61
APTX-230ENST00000494649 P0C880 135 aa4.97□□□□□ -1.61
APTX-230ENST00000494649 SPRR2GQ9BYE4 73 aa4.97□□□□□ -1.61
APTX-230ENST00000494649 FCGBPQ9Y6R7 5405 aaPredicted RBP4.95□□□□□ -1.62
APTX-230ENST00000494649 H7BZZ5 65 aa4.95□□□□□ -1.62
APTX-230ENST00000494649 MT1BP07438 61 aa4.92□□□□□ -1.62
APTX-230ENST00000494649 KRTAP3-2Q9BYR7 98 aa4.92□□□□□ -1.62
APTX-230ENST00000494649 ATP5EP56381 51 aaPredicted RBP4.92□□□□□ -1.62
APTX-230ENST00000494649 Q5VV11 94 aa4.92□□□□□ -1.62
APTX-230ENST00000494649 CRIPTQ9P021 101 aa4.92□□□□□ -1.62
APTX-230ENST00000494649 COA5Q86WW8 74 aa4.91□□□□□ -1.62
APTX-230ENST00000494649 SPTSSBQ8NFR3 76 aa4.91□□□□□ -1.62
APTX-230ENST00000494649 KRTAP19-8Q3LI54 63 aa4.89□□□□□ -1.63
APTX-230ENST00000494649 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
APTX-230ENST00000494649 R4GN34 69 aa4.88□□□□□ -1.63
APTX-230ENST00000494649 M0QZ58 72 aa4.87□□□□□ -1.63
APTX-230ENST00000494649 RPS28P62857 69 aaKnown RBP4.86□□□□□ -1.63
APTX-230ENST00000494649 LINC01554Q52M75 96 aa4.85□□□□□ -1.63
APTX-230ENST00000494649 SYNE2Q8WXH0 6885 aaKnown RBP4.84□□□□□ -1.64
APTX-230ENST00000494649 MACF1Q9UPN3 7388 aaKnown RBP4.82□□□□□ -1.64
APTX-230ENST00000494649 SERP1Q9Y6X1 66 aa4.82□□□□□ -1.64
APTX-230ENST00000494649 A6NN06 94 aa4.8□□□□□ -1.64
APTX-230ENST00000494649 PLAC4Q8WY50 150 aa4.74□□□□□ -1.65
APTX-230ENST00000494649 KRTAP10-5P60370 271 aa4.74□□□□□ -1.65
APTX-230ENST00000494649 KRTAP13-4Q3LI77 160 aa4.73□□□□□ -1.65
APTX-230ENST00000494649 SEC61GP60059 68 aa4.72□□□□□ -1.65
APTX-230ENST00000494649 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
APTX-230ENST00000494649 MT1XP80297 61 aa4.67□□□□□ -1.66
APTX-230ENST00000494649 SPATA8Q6RVD6 105 aa4.67□□□□□ -1.66
APTX-230ENST00000494649 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
APTX-230ENST00000494649 A0A1B0GU69 56 aa4.65□□□□□ -1.66
APTX-230ENST00000494649 A0A0D9SG42 100 aa4.65□□□□□ -1.67
APTX-230ENST00000494649 A0A1B0GU33 70 aa4.63□□□□□ -1.67
APTX-230ENST00000494649 PRO2289Q9P1D8 64 aa4.62□□□□□ -1.67
APTX-230ENST00000494649 KMT2DO14686 5537 aa4.61□□□□□ -1.67
APTX-230ENST00000494649 V9GYY9 64 aa4.61□□□□□ -1.67
APTX-230ENST00000494649 Q1T7F1 81 aa4.58□□□□□ -1.68
APTX-230ENST00000494649 SPINT4Q6UDR6 99 aa4.55□□□□□ -1.68
APTX-230ENST00000494649 A8MU10 97 aa4.54□□□□□ -1.68
APTX-230ENST00000494649 CAMK2N1Q7Z7J9 78 aa4.53□□□□□ -1.68
APTX-230ENST00000494649 LINC01558Q9Y6Z2 57 aa4.53□□□□□ -1.68
APTX-230ENST00000494649 PRR15LQ9BU68 103 aa4.52□□□□□ -1.69
APTX-230ENST00000494649 NEBP20929 6669 aa4.52□□□□□ -1.69
APTX-230ENST00000494649 KRTAP10-7P60409 375 aaPredicted RBP4.5□□□□□ -1.69
APTX-230ENST00000494649 KRTAP12-2P59991 146 aa4.49□□□□□ -1.69
APTX-230ENST00000494649 KRTAP12-1P59990 96 aa4.49□□□□□ -1.69
APTX-230ENST00000494649 MUC12Q9UKN1 5478 aa4.48□□□□□ -1.69
APTX-230ENST00000494649 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
APTX-230ENST00000494649 PSPHP1O15172 72 aa4.47□□□□□ -1.69
APTX-230ENST00000494649 KRTAP4-8Q9BYQ9 185 aa4.47□□□□□ -1.69
APTX-230ENST00000494649 PRO0628Q9UI54 55 aa4.42□□□□□ -1.7
APTX-230ENST00000494649 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
APTX-230ENST00000494649 LOC100996750A0A140TA64 210 aa4.41□□□□□ -1.7
APTX-230ENST00000494649 KRTAP4-6Q9BYQ5 205 aa4.41□□□□□ -1.7
APTX-230ENST00000494649 UQCR11O14957 56 aa4.4□□□□□ -1.71
APTX-230ENST00000494649 KRTAP20-1Q3LI63 56 aa4.4□□□□□ -1.71
APTX-230ENST00000494649 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
APTX-230ENST00000494649 BRK1Q8WUW1 75 aa4.39□□□□□ -1.71
APTX-230ENST00000494649 SPRR2FQ96RM1 72 aa4.39□□□□□ -1.71
APTX-230ENST00000494649 KRTAP5-9P26371 169 aa4.38□□□□□ -1.71
APTX-230ENST00000494649 MDN1Q9NU22 5596 aa4.38□□□□□ -1.71
APTX-230ENST00000494649 A6NED7 52 aa4.36□□□□□ -1.71
APTX-230ENST00000494649 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
APTX-230ENST00000494649 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
APTX-230ENST00000494649 C10orf95Q9H7T3 257 aa4.28□□□□□ -1.72
APTX-230ENST00000494649 SPRR2EP22531 72 aa4.26□□□□□ -1.73
APTX-230ENST00000494649 SPRR2BP35325 72 aa4.26□□□□□ -1.73
APTX-230ENST00000494649 SPRR2AP35326 72 aa4.26□□□□□ -1.73
APTX-230ENST00000494649 KRTAP2-3P0C7H8 128 aa4.23□□□□□ -1.73
APTX-230ENST00000494649 KRTAP2-4Q9BYR9 128 aa4.23□□□□□ -1.73
APTX-230ENST00000494649 LCE1AQ5T7P2 110 aa4.21□□□□□ -1.74
APTX-230ENST00000494649 TNP1P09430 55 aa4.2□□□□□ -1.74
APTX-230ENST00000494649 K7ERS5 55 aa4.18□□□□□ -1.74
APTX-230ENST00000494649 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
APTX-230ENST00000494649 KRTAP19-7Q3SYF9 63 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms