RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ATOX1O00244 68 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 CYB5AP00167 134 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 RPL39P5Q59GN2 51 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 TMEM167AQ8TBQ9 72 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 TMEM263Q8WUH6 116 aaKnown RBP0.73□□□□□ -2.29
CMSS1-207ENST00000494412 VAMP8Q9BV40 100 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 SNHG12Q9BXW3 62 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 CNFNQ9BYD5 112 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 CACFD1Q9UGQ2 172 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 SPCS1Q9Y6A9 102 aa0.73□□□□□ -2.29
CMSS1-207ENST00000494412 C10orf113Q5VZT2 155 aa0.72□□□□□ -2.29
CMSS1-207ENST00000494412 UBE2D4Q9Y2X8 147 aa0.71□□□□□ -2.3
CMSS1-207ENST00000494412 FAUP35544 74 aaKnown RBP0.7□□□□□ -2.3
CMSS1-207ENST00000494412 PRCDQ00LT1 54 aa0.7□□□□□ -2.3
CMSS1-207ENST00000494412 SERP2Q8N6R1 65 aa0.7□□□□□ -2.3
CMSS1-207ENST00000494412 A0A096LNI7 61 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 SFTA3P0C7M3 94 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 PMCHL1Q16048 86 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 PIGYQ3MUY2 71 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 KRTAP8-1Q8IUC2 63 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 TRGV9Q99603 122 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 TTTY10Q9BZA0 68 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 PRO1933Q9H354 126 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 TP53AIP1Q9HCN2 124 aa0.69□□□□□ -2.3
CMSS1-207ENST00000494412 TRBV25-1A0A075B6N4 114 aa0.68□□□□□ -2.3
CMSS1-207ENST00000494412 C7orf77A4D0Y5 90 aa0.68□□□□□ -2.3
CMSS1-207ENST00000494412 H3BQF6 201 aa0.68□□□□□ -2.3
CMSS1-207ENST00000494412 V9GYS6 101 aa0.68□□□□□ -2.3
CMSS1-207ENST00000494412 MUC16Q8WXI7 14507 aa0.67□□□□□ -2.3
CMSS1-207ENST00000494412 SYNE1Q8NF91 8797 aaKnown RBP0.67□□□□□ -2.3
CMSS1-207ENST00000494412 TRBV6-1A0A0K0K1D8 114 aa0.67□□□□□ -2.3
CMSS1-207ENST00000494412 H7BZZ5 65 aa0.67□□□□□ -2.3
CMSS1-207ENST00000494412 K7EIM0 57 aa0.67□□□□□ -2.3
CMSS1-207ENST00000494412 CLPSL2Q6UWE3 100 aa0.67□□□□□ -2.3
CMSS1-207ENST00000494412 A0A087WVE0 104 aa0.66□□□□□ -2.3
CMSS1-207ENST00000494412 C9orf92A6NGG3 77 aa0.66□□□□□ -2.3
CMSS1-207ENST00000494412 KLK9Q2XQG4 91 aa0.66□□□□□ -2.3
CMSS1-207ENST00000494412 ABRACLQ9P1F3 81 aa0.66□□□□□ -2.3
CMSS1-207ENST00000494412 SYS1-DBNDD2H3BUS1 97 aa0.65□□□□□ -2.31
CMSS1-207ENST00000494412 SPINK4O60575 86 aa0.65□□□□□ -2.31
CMSS1-207ENST00000494412 WT1-ASQ06250 92 aa0.65□□□□□ -2.31
CMSS1-207ENST00000494412 ENHOQ6UWT2 76 aa0.65□□□□□ -2.31
CMSS1-207ENST00000494412 Q8IZM0 81 aa0.65□□□□□ -2.31
CMSS1-207ENST00000494412 Q9H521 79 aa0.65□□□□□ -2.31
CMSS1-207ENST00000494412 FXYD6-FXYD2A0A087WZ82 144 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 TRBV7-7A0A0K0K1E9 115 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 A8MTW9 85 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 I3L2K1 104 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 SNRPGP62308 76 aaKnown RBP0.64□□□□□ -2.31
CMSS1-207ENST00000494412 HMGN3Q15651 99 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 Q5BKY6 102 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 LINC01590Q5TEZ4 76 aa0.64□□□□□ -2.31
CMSS1-207ENST00000494412 S100A13Q99584 98 aa0.63□□□□□ -2.31
CMSS1-207ENST00000494412 A0A087WWC5 75 aa0.62□□□□□ -2.31
CMSS1-207ENST00000494412 SPINK1P00995 79 aa0.62□□□□□ -2.31
CMSS1-207ENST00000494412 MT1BP07438 61 aa0.61□□□□□ -2.31
CMSS1-207ENST00000494412 TRBV7-4A0A0J9YYF1 115 aa0.6□□□□□ -2.31
CMSS1-207ENST00000494412 CFDP00746 253 aaPredicted RBP0.6□□□□□ -2.31
CMSS1-207ENST00000494412 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
CMSS1-207ENST00000494412 KRTAP20-2Q3LI61 65 aa0.6□□□□□ -2.31
CMSS1-207ENST00000494412 C6orf201Q7Z4U5 140 aa0.6□□□□□ -2.31
CMSS1-207ENST00000494412 DEFB107AQ8IZN7 70 aa0.6□□□□□ -2.31
CMSS1-207ENST00000494412 CMC2Q9NRP2 79 aa0.6□□□□□ -2.31
CMSS1-207ENST00000494412 ARMS2P0C7Q2 107 aa0.59□□□□□ -2.31
CMSS1-207ENST00000494412 ARHGAP5-AS1Q96IT6 56 aa0.59□□□□□ -2.31
CMSS1-207ENST00000494412 LINC00959A0A1B0GUT2 108 aa0.58□□□□□ -2.32
CMSS1-207ENST00000494412 ETDBQ3ZM63 59 aa0.58□□□□□ -2.32
CMSS1-207ENST00000494412 SMIM11AP58511 58 aa0.57□□□□□ -2.32
CMSS1-207ENST00000494412 GNGT1P63211 74 aa0.57□□□□□ -2.32
CMSS1-207ENST00000494412 C20orf78Q9BR46 151 aa0.57□□□□□ -2.32
CMSS1-207ENST00000494412 A0A1B0GU69 56 aa0.56□□□□□ -2.32
CMSS1-207ENST00000494412 F8WEM9 126 aa0.56□□□□□ -2.32
CMSS1-207ENST00000494412 H0Y9P7 68 aa0.56□□□□□ -2.32
CMSS1-207ENST00000494412 PRLHP81277 87 aa0.56□□□□□ -2.32
CMSS1-207ENST00000494412 PSENENQ9NZ42 101 aa0.56□□□□□ -2.32
CMSS1-207ENST00000494412 HIGD1BQ9P298 99 aa0.56□□□□□ -2.32
CMSS1-207ENST00000494412 SNRPGP15A8MWD9 76 aa0.55□□□□□ -2.32
CMSS1-207ENST00000494412 RPS29P62273 56 aaKnown RBP0.55□□□□□ -2.32
CMSS1-207ENST00000494412 KRTAP19-8Q3LI54 63 aa0.55□□□□□ -2.32
CMSS1-207ENST00000494412 PHGR1C9JFL3 82 aa0.54□□□□□ -2.32
CMSS1-207ENST00000494412 LEPROTL1O95214 131 aa0.54□□□□□ -2.32
CMSS1-207ENST00000494412 D6R8Y8 96 aa0.53□□□□□ -2.32
CMSS1-207ENST00000494412 GNG2P59768 71 aa0.53□□□□□ -2.32
CMSS1-207ENST00000494412 MUSTN1Q8IVN3 82 aa0.53□□□□□ -2.32
CMSS1-207ENST00000494412 CEBPZOSA8MTT3 80 aa0.52□□□□□ -2.33
CMSS1-207ENST00000494412 H0YAA0 97 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 NDUFA1O15239 70 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 MT1XP80297 61 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 PEA15Q15121 130 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 PYY3Q5JQD4 70 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 SPRR2GQ9BYE4 73 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 C6orf48Q9UBA6 75 aa0.51□□□□□ -2.33
CMSS1-207ENST00000494412 TRAV21A0A0B4J279 112 aa0.5□□□□□ -2.33
CMSS1-207ENST00000494412 IGLC2P0DOY2 106 aa0.5□□□□□ -2.33
CMSS1-207ENST00000494412 NMSQ5H8A3 153 aa0.5□□□□□ -2.33
CMSS1-207ENST00000494412 ALKAL2Q6UX46 152 aa0.5□□□□□ -2.33
CMSS1-207ENST00000494412 H3BVH4 76 aa0.49□□□□□ -2.33
CMSS1-207ENST00000494412 K7EQZ3 153 aa0.49□□□□□ -2.33
CMSS1-207ENST00000494412 SPRR1AP35321 89 aa0.49□□□□□ -2.33
CMSS1-207ENST00000494412 FXYD6Q9H0Q3 95 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms