RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 H1FX-AS1Q4G0G2 97 aa4.22□□□□□ -1.73
ITGB1-217ENST00000494395 CRCT1Q9UGL9 99 aa4.22□□□□□ -1.73
ITGB1-217ENST00000494395 KRTAP2-2Q9BYT5 123 aa4.21□□□□□ -1.74
ITGB1-217ENST00000494395 C4orf26Q17RF5 130 aa4.2□□□□□ -1.74
ITGB1-217ENST00000494395 LINC00643Q86TS7 51 aa4.19□□□□□ -1.74
ITGB1-217ENST00000494395 OCR1Q9BZK8 76 aa4.19□□□□□ -1.74
ITGB1-217ENST00000494395 FSIP2Q5CZC0 6907 aa4.18□□□□□ -1.74
ITGB1-217ENST00000494395 A0A087WVE0 104 aa4.17□□□□□ -1.74
ITGB1-217ENST00000494395 TRAV22A0A0B4J277 110 aa4.17□□□□□ -1.74
ITGB1-217ENST00000494395 KRTAP10-10P60014 251 aa4.17□□□□□ -1.74
ITGB1-217ENST00000494395 HIST1H4AP62805 103 aaKnown RBP4.17□□□□□ -1.74
ITGB1-217ENST00000494395 KRTAP5-3Q6L8H2 238 aa4.16□□□□□ -1.74
ITGB1-217ENST00000494395 CYP4F30PQ9H0H9 118 aa4.15□□□□□ -1.75
ITGB1-217ENST00000494395 UQCRQO14949 82 aa4.13□□□□□ -1.75
ITGB1-217ENST00000494395 C1orf64Q8NEQ6 169 aa4.13□□□□□ -1.75
ITGB1-217ENST00000494395 LOC101927531A0A1B0GV80 90 aa4.12□□□□□ -1.75
ITGB1-217ENST00000494395 J3QR89 54 aa4.11□□□□□ -1.75
ITGB1-217ENST00000494395 USH2AO75445 5202 aa4.11□□□□□ -1.75
ITGB1-217ENST00000494395 H0Y9P7 68 aa4.1□□□□□ -1.75
ITGB1-217ENST00000494395 ATOX1O00244 68 aa4.09□□□□□ -1.75
ITGB1-217ENST00000494395 S4R3F8 94 aa4.09□□□□□ -1.75
ITGB1-217ENST00000494395 LCA10Q71F78 164 aa4.08□□□□□ -1.76
ITGB1-217ENST00000494395 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
ITGB1-217ENST00000494395 KLKP1Q107X0 134 aa4.04□□□□□ -1.76
ITGB1-217ENST00000494395 LINC00208Q96KT6 92 aa4.04□□□□□ -1.76
ITGB1-217ENST00000494395 CSAG1Q6PB30 78 aa4.03□□□□□ -1.76
ITGB1-217ENST00000494395 SSPOA2VEC9 5147 aa4.03□□□□□ -1.76
ITGB1-217ENST00000494395 K7ERU9 68 aa4.02□□□□□ -1.77
ITGB1-217ENST00000494395 MT-ATP8P03928 68 aa4.02□□□□□ -1.77
ITGB1-217ENST00000494395 IMUPQ9GZP8 106 aa4.02□□□□□ -1.77
ITGB1-217ENST00000494395 MP68P56378 58 aa4.01□□□□□ -1.77
ITGB1-217ENST00000494395 H3BPC8 53 aa4□□□□□ -1.77
ITGB1-217ENST00000494395 A8MUN3 132 aa3.99□□□□□ -1.77
ITGB1-217ENST00000494395 KRTAP19-6Q3LI70 58 aa3.98□□□□□ -1.77
ITGB1-217ENST00000494395 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
ITGB1-217ENST00000494395 SCGB1A1P11684 91 aa3.97□□□□□ -1.77
ITGB1-217ENST00000494395 FAM236AA0A1B0GUQ0 79 aa3.96□□□□□ -1.78
ITGB1-217ENST00000494395 FAM236BA0A1B0GV22 79 aa3.96□□□□□ -1.78
ITGB1-217ENST00000494395 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.78
ITGB1-217ENST00000494395 H0YAA0 97 aa3.94□□□□□ -1.78
ITGB1-217ENST00000494395 NDUFC1O43677 76 aa3.94□□□□□ -1.78
ITGB1-217ENST00000494395 LCE1FQ5T754 118 aa3.94□□□□□ -1.78
ITGB1-217ENST00000494395 TRAV7A0A075B6U4 112 aa3.93□□□□□ -1.78
ITGB1-217ENST00000494395 MT1BP07438 61 aa3.93□□□□□ -1.78
ITGB1-217ENST00000494395 KRTAP19-8Q3LI54 63 aa3.93□□□□□ -1.78
ITGB1-217ENST00000494395 DMAC1Q96GE9 116 aa3.93□□□□□ -1.78
ITGB1-217ENST00000494395 SMIM20Q8N5G0 67 aa3.91□□□□□ -1.78
ITGB1-217ENST00000494395 CRIPTQ9P021 101 aa3.88□□□□□ -1.79
ITGB1-217ENST00000494395 Q5VV11 94 aa3.87□□□□□ -1.79
ITGB1-217ENST00000494395 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
ITGB1-217ENST00000494395 SERP2Q8N6R1 65 aa3.83□□□□□ -1.8
ITGB1-217ENST00000494395 SNURFQ9Y675 71 aa3.83□□□□□ -1.8
ITGB1-217ENST00000494395 MACF1Q9UPN3 7388 aaKnown RBP3.82□□□□□ -1.8
ITGB1-217ENST00000494395 P0C880 135 aa3.81□□□□□ -1.8
ITGB1-217ENST00000494395 ACYP2P14621 99 aa3.81□□□□□ -1.8
ITGB1-217ENST00000494395 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
ITGB1-217ENST00000494395 C20orf197Q8N268 126 aa3.8□□□□□ -1.8
ITGB1-217ENST00000494395 KRTAP10-12P60413 245 aa3.79□□□□□ -1.8
ITGB1-217ENST00000494395 SPANXA2-OT1Q8N9U9 137 aa3.79□□□□□ -1.8
ITGB1-217ENST00000494395 A6NN06 94 aa3.78□□□□□ -1.8
ITGB1-217ENST00000494395 R4GN34 69 aa3.74□□□□□ -1.81
ITGB1-217ENST00000494395 COX7CP15954 63 aa3.73□□□□□ -1.81
ITGB1-217ENST00000494395 SPTSSBQ8NFR3 76 aa3.73□□□□□ -1.81
ITGB1-217ENST00000494395 M0QZ58 72 aa3.72□□□□□ -1.81
ITGB1-217ENST00000494395 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
ITGB1-217ENST00000494395 CYSTM1Q9H1C7 97 aa3.71□□□□□ -1.82
ITGB1-217ENST00000494395 SYNE2Q8WXH0 6885 aaKnown RBP3.71□□□□□ -1.82
ITGB1-217ENST00000494395 CHKB-CPT1BH3BT56 60 aa3.7□□□□□ -1.82
ITGB1-217ENST00000494395 MT1XP80297 61 aa3.7□□□□□ -1.82
ITGB1-217ENST00000494395 H7BZZ5 65 aa3.68□□□□□ -1.82
ITGB1-217ENST00000494395 LCE3CQ5T5A8 94 aa3.68□□□□□ -1.82
ITGB1-217ENST00000494395 COA5Q86WW8 74 aa3.67□□□□□ -1.82
ITGB1-217ENST00000494395 PLAC4Q8WY50 150 aa3.66□□□□□ -1.82
ITGB1-217ENST00000494395 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
ITGB1-217ENST00000494395 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
ITGB1-217ENST00000494395 SEC61GP60059 68 aa3.62□□□□□ -1.83
ITGB1-217ENST00000494395 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
ITGB1-217ENST00000494395 KRTAP13-4Q3LI77 160 aa3.62□□□□□ -1.83
ITGB1-217ENST00000494395 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
ITGB1-217ENST00000494395 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
ITGB1-217ENST00000494395 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
ITGB1-217ENST00000494395 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
ITGB1-217ENST00000494395 CCDC179H3BU77 68 aa3.57□□□□□ -1.84
ITGB1-217ENST00000494395 A8MU10 97 aa3.54□□□□□ -1.84
ITGB1-217ENST00000494395 KMT2DO14686 5537 aa3.54□□□□□ -1.84
ITGB1-217ENST00000494395 MUC12Q9UKN1 5478 aa3.52□□□□□ -1.85
ITGB1-217ENST00000494395 SERP1Q9Y6X1 66 aa3.51□□□□□ -1.85
ITGB1-217ENST00000494395 NEBP20929 6669 aa3.5□□□□□ -1.85
ITGB1-217ENST00000494395 ATP5EP56381 51 aaPredicted RBP3.49□□□□□ -1.85
ITGB1-217ENST00000494395 A0A1B0GU33 70 aa3.48□□□□□ -1.85
ITGB1-217ENST00000494395 SPATA8Q6RVD6 105 aa3.48□□□□□ -1.85
ITGB1-217ENST00000494395 KRTAP8-1Q8IUC2 63 aa3.48□□□□□ -1.85
ITGB1-217ENST00000494395 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
ITGB1-217ENST00000494395 MDN1Q9NU22 5596 aa3.46□□□□□ -1.86
ITGB1-217ENST00000494395 A0A0D9SG42 100 aa3.44□□□□□ -1.86
ITGB1-217ENST00000494395 A0A1B0GU69 56 aa3.44□□□□□ -1.86
ITGB1-217ENST00000494395 KRTAP12-1P59990 96 aa3.44□□□□□ -1.86
ITGB1-217ENST00000494395 TMEM258P61165 79 aa3.43□□□□□ -1.86
ITGB1-217ENST00000494395 CAMK2N1Q7Z7J9 78 aa3.42□□□□□ -1.86
ITGB1-217ENST00000494395 KRTAP5-11Q6L8G4 156 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms