RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 A8MUN3 132 aa5.7□□□□□ -1.5
MCF2L-231ENST00000494043 DMAC1Q96GE9 116 aa5.7□□□□□ -1.5
MCF2L-231ENST00000494043 FAT4Q6V0I7 4981 aa5.69□□□□□ -1.5
MCF2L-231ENST00000494043 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
MCF2L-231ENST00000494043 TMEM258P61165 79 aa5.66□□□□□ -1.5
MCF2L-231ENST00000494043 FLGP20930 4061 aaPredicted RBP5.65□□□□□ -1.51
MCF2L-231ENST00000494043 ACYP2P14621 99 aa5.63□□□□□ -1.51
MCF2L-231ENST00000494043 ATP5EP56381 51 aaPredicted RBP5.63□□□□□ -1.51
MCF2L-231ENST00000494043 S4R3F8 94 aa5.61□□□□□ -1.51
MCF2L-231ENST00000494043 KRTAP9-2Q9BYQ4 174 aa5.59□□□□□ -1.51
MCF2L-231ENST00000494043 MT1HP80294 61 aa5.58□□□□□ -1.52
MCF2L-231ENST00000494043 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.57□□□□□ -1.52
MCF2L-231ENST00000494043 LCA10Q71F78 164 aa5.57□□□□□ -1.52
MCF2L-231ENST00000494043 COA5Q86WW8 74 aa5.56□□□□□ -1.52
MCF2L-231ENST00000494043 KRTAP9-6A0A140TA67 174 aa5.55□□□□□ -1.52
MCF2L-231ENST00000494043 CHKB-CPT1BH3BT56 60 aa5.54□□□□□ -1.52
MCF2L-231ENST00000494043 KRTAP4-12Q9BQ66 201 aa5.52□□□□□ -1.53
MCF2L-231ENST00000494043 M0R2T5 61 aa5.5□□□□□ -1.53
MCF2L-231ENST00000494043 CSAG1Q6PB30 78 aa5.49□□□□□ -1.53
MCF2L-231ENST00000494043 SERP1Q9Y6X1 66 aa5.48□□□□□ -1.53
MCF2L-231ENST00000494043 KRTAP19-1Q8IUB9 90 aa5.47□□□□□ -1.53
MCF2L-231ENST00000494043 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
MCF2L-231ENST00000494043 LCE3BQ5TA77 95 aa5.46□□□□□ -1.54
MCF2L-231ENST00000494043 H3BS24 57 aa5.4□□□□□ -1.54
MCF2L-231ENST00000494043 KRTAP10-6P60371 365 aaPredicted RBP5.4□□□□□ -1.54
MCF2L-231ENST00000494043 RPS28P62857 69 aaKnown RBP5.37□□□□□ -1.55
MCF2L-231ENST00000494043 H0YAA0 97 aa5.36□□□□□ -1.55
MCF2L-231ENST00000494043 KRTAP9-8Q9BYQ0 159 aa5.34□□□□□ -1.55
MCF2L-231ENST00000494043 MT2AP02795 61 aa5.32□□□□□ -1.56
MCF2L-231ENST00000494043 ADM2Q7Z4H4 148 aa5.32□□□□□ -1.56
MCF2L-231ENST00000494043 KRTAP9-9Q9BYP9 154 aa5.31□□□□□ -1.56
MCF2L-231ENST00000494043 KRTAP9-4Q9BYQ2 154 aa5.31□□□□□ -1.56
MCF2L-231ENST00000494043 SMIM26A0A096LP01 95 aa5.3□□□□□ -1.56
MCF2L-231ENST00000494043 MT1FP04733 61 aa5.28□□□□□ -1.56
MCF2L-231ENST00000494043 LINC01558Q9Y6Z2 57 aa5.28□□□□□ -1.56
MCF2L-231ENST00000494043 SEC61GP60059 68 aa5.27□□□□□ -1.57
MCF2L-231ENST00000494043 P0C880 135 aa5.26□□□□□ -1.57
MCF2L-231ENST00000494043 KRTAP10-10P60014 251 aa5.26□□□□□ -1.57
MCF2L-231ENST00000494043 A0A1B0GU69 56 aa5.25□□□□□ -1.57
MCF2L-231ENST00000494043 Q1T7F1 81 aa5.25□□□□□ -1.57
MCF2L-231ENST00000494043 V9GYY9 64 aa5.25□□□□□ -1.57
MCF2L-231ENST00000494043 PRR15LQ9BU68 103 aa5.22□□□□□ -1.57
MCF2L-231ENST00000494043 KRTAP4-8A0A0G2JLE6 195 aa5.21□□□□□ -1.58
MCF2L-231ENST00000494043 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
MCF2L-231ENST00000494043 KRTAP19-4Q3LI73 84 aa5.16□□□□□ -1.58
MCF2L-231ENST00000494043 KRTAP9-3Q9BYQ3 159 aa5.16□□□□□ -1.58
MCF2L-231ENST00000494043 PSPHP1O15172 72 aa5.15□□□□□ -1.59
MCF2L-231ENST00000494043 A0A1B0GU33 70 aa5.14□□□□□ -1.59
MCF2L-231ENST00000494043 M0QZ58 72 aa5.14□□□□□ -1.59
MCF2L-231ENST00000494043 R4GN34 69 aa5.14□□□□□ -1.59
MCF2L-231ENST00000494043 Q5VV11 94 aa5.12□□□□□ -1.59
MCF2L-231ENST00000494043 SPRR2GQ9BYE4 73 aa5.12□□□□□ -1.59
MCF2L-231ENST00000494043 KRTAP13-4Q3LI77 160 aa5.1□□□□□ -1.59
MCF2L-231ENST00000494043 LCE1DQ5T752 114 aa5.1□□□□□ -1.59
MCF2L-231ENST00000494043 LCE4AQ5TA78 99 aa5.07□□□□□ -1.6
MCF2L-231ENST00000494043 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
MCF2L-231ENST00000494043 FSIP2Q5CZC0 6907 aa5.07□□□□□ -1.6
MCF2L-231ENST00000494043 UQCR11O14957 56 aa5.06□□□□□ -1.6
MCF2L-231ENST00000494043 KRTAP19-8Q3LI54 63 aa5.03□□□□□ -1.6
MCF2L-231ENST00000494043 LINC01554Q52M75 96 aa5.03□□□□□ -1.6
MCF2L-231ENST00000494043 KRTAP4-7Q9BYR0 210 aa5.02□□□□□ -1.61
MCF2L-231ENST00000494043 A6NED7 52 aa5□□□□□ -1.61
MCF2L-231ENST00000494043 MIR22HGQ0VDD5 57 aa4.99□□□□□ -1.61
MCF2L-231ENST00000494043 A0A0D9SG42 100 aa4.98□□□□□ -1.61
MCF2L-231ENST00000494043 KRTAP9-7A8MTY7 169 aa4.98□□□□□ -1.61
MCF2L-231ENST00000494043 A8MU10 97 aa4.97□□□□□ -1.61
MCF2L-231ENST00000494043 USH2AO75445 5202 aa4.97□□□□□ -1.61
MCF2L-231ENST00000494043 A6NN06 94 aa4.96□□□□□ -1.62
MCF2L-231ENST00000494043 MT1BP07438 61 aa4.96□□□□□ -1.62
MCF2L-231ENST00000494043 KRTAP4-9Q9BYQ8 210 aa4.94□□□□□ -1.62
MCF2L-231ENST00000494043 CRCT1Q9UGL9 99 aa4.93□□□□□ -1.62
MCF2L-231ENST00000494043 PLAC4Q8WY50 150 aa4.91□□□□□ -1.62
MCF2L-231ENST00000494043 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
MCF2L-231ENST00000494043 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
MCF2L-231ENST00000494043 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
MCF2L-231ENST00000494043 SPINT4Q6UDR6 99 aa4.88□□□□□ -1.63
MCF2L-231ENST00000494043 SSPOA2VEC9 5147 aa4.85□□□□□ -1.63
MCF2L-231ENST00000494043 BRK1Q8WUW1 75 aa4.81□□□□□ -1.64
MCF2L-231ENST00000494043 K7ERS5 55 aa4.8□□□□□ -1.64
MCF2L-231ENST00000494043 CAMK2N1Q7Z7J9 78 aa4.8□□□□□ -1.64
MCF2L-231ENST00000494043 KRTAP19-6Q3LI70 58 aa4.79□□□□□ -1.64
MCF2L-231ENST00000494043 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
MCF2L-231ENST00000494043 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
MCF2L-231ENST00000494043 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
MCF2L-231ENST00000494043 MT1XP80297 61 aa4.76□□□□□ -1.65
MCF2L-231ENST00000494043 KRTAP10-5P60370 271 aa4.75□□□□□ -1.65
MCF2L-231ENST00000494043 PRO2289Q9P1D8 64 aa4.74□□□□□ -1.65
MCF2L-231ENST00000494043 FCGBPQ9Y6R7 5405 aaPredicted RBP4.67□□□□□ -1.66
MCF2L-231ENST00000494043 C10orf95Q9H7T3 257 aa4.64□□□□□ -1.67
MCF2L-231ENST00000494043 PRO0628Q9UI54 55 aa4.62□□□□□ -1.67
MCF2L-231ENST00000494043 ROMO1P60602 79 aa4.57□□□□□ -1.68
MCF2L-231ENST00000494043 KRTAP10-7P60409 375 aaPredicted RBP4.56□□□□□ -1.68
MCF2L-231ENST00000494043 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
MCF2L-231ENST00000494043 TNP1P09430 55 aa4.53□□□□□ -1.68
MCF2L-231ENST00000494043 PMAIP1Q13794 54 aa4.53□□□□□ -1.68
MCF2L-231ENST00000494043 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
MCF2L-231ENST00000494043 KRTAP10-12P60413 245 aa4.52□□□□□ -1.69
MCF2L-231ENST00000494043 SYNE2Q8WXH0 6885 aaKnown RBP4.51□□□□□ -1.69
MCF2L-231ENST00000494043 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
MCF2L-231ENST00000494043 KMT2DO14686 5537 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms