RNA–Protein interactions for RNA: ENST00000493536.5

SNHG16-202, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best)

Gene SNHG16, Length 2,424 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-202ENST00000493536 SMIM26A0A096LP01 95 aa4.6□□□□□ -1.67
SNHG16-202ENST00000493536 CHKB-CPT1BH3BT56 60 aa4.59□□□□□ -1.67
SNHG16-202ENST00000493536 A8MUN3 132 aa4.58□□□□□ -1.68
SNHG16-202ENST00000493536 MPLKIPQ8TAP9 179 aa4.55□□□□□ -1.68
SNHG16-202ENST00000493536 COX6B2Q6YFQ2 88 aa4.55□□□□□ -1.68
SNHG16-202ENST00000493536 HERC1Q15751 4861 aa4.54□□□□□ -1.68
SNHG16-202ENST00000493536 KRTAP3-1Q9BYR8 98 aa4.52□□□□□ -1.69
SNHG16-202ENST00000493536 HMCN1Q96RW7 5635 aa4.51□□□□□ -1.69
SNHG16-202ENST00000493536 PRO0628Q9UI54 55 aa4.51□□□□□ -1.69
SNHG16-202ENST00000493536 RBM12B-AS1Q9P1G2 102 aa4.5□□□□□ -1.69
SNHG16-202ENST00000493536 Q1T7F1 81 aa4.49□□□□□ -1.69
SNHG16-202ENST00000493536 SPTSSBQ8NFR3 76 aa4.47□□□□□ -1.69
SNHG16-202ENST00000493536 PRAC1Q96KF2 57 aa4.46□□□□□ -1.69
SNHG16-202ENST00000493536 PSPHP1O15172 72 aa4.45□□□□□ -1.7
SNHG16-202ENST00000493536 HMCN2Q8NDA2 5059 aa4.44□□□□□ -1.7
SNHG16-202ENST00000493536 H1FX-AS1Q4G0G2 97 aa4.44□□□□□ -1.7
SNHG16-202ENST00000493536 PRR15LQ9BU68 103 aa4.44□□□□□ -1.7
SNHG16-202ENST00000493536 KRTAP4-1Q9BYQ7 146 aa4.43□□□□□ -1.7
SNHG16-202ENST00000493536 LINC01558Q9Y6Z2 57 aa4.43□□□□□ -1.7
SNHG16-202ENST00000493536 S4R3F8 94 aa4.43□□□□□ -1.7
SNHG16-202ENST00000493536 LCA10Q71F78 164 aa4.41□□□□□ -1.7
SNHG16-202ENST00000493536 MUC17Q685J3 4493 aa4.4□□□□□ -1.7
SNHG16-202ENST00000493536 A0A1B0GU69 56 aa4.4□□□□□ -1.71
SNHG16-202ENST00000493536 Q5VV11 94 aa4.37□□□□□ -1.71
SNHG16-202ENST00000493536 MUC2Q02817 5179 aa4.36□□□□□ -1.71
SNHG16-202ENST00000493536 A6NED7 52 aa4.33□□□□□ -1.72
SNHG16-202ENST00000493536 CSAG1Q6PB30 78 aa4.33□□□□□ -1.72
SNHG16-202ENST00000493536 BRK1Q8WUW1 75 aa4.31□□□□□ -1.72
SNHG16-202ENST00000493536 KRTAP19-2Q3LHN2 52 aa4.29□□□□□ -1.72
SNHG16-202ENST00000493536 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
SNHG16-202ENST00000493536 UQCR11O14957 56 aa4.26□□□□□ -1.73
SNHG16-202ENST00000493536 A0A1B0GU33 70 aa4.24□□□□□ -1.73
SNHG16-202ENST00000493536 PMAIP1Q13794 54 aa4.24□□□□□ -1.73
SNHG16-202ENST00000493536 ADM2Q7Z4H4 148 aa4.24□□□□□ -1.73
SNHG16-202ENST00000493536 RNF213Q63HN8 5207 aa4.24□□□□□ -1.73
SNHG16-202ENST00000493536 KRTAP10-6P60371 365 aaPredicted RBP4.21□□□□□ -1.74
SNHG16-202ENST00000493536 MIR22HGQ0VDD5 57 aa4.21□□□□□ -1.74
SNHG16-202ENST00000493536 CDC42SE1Q9NRR8 79 aa4.21□□□□□ -1.74
SNHG16-202ENST00000493536 FLGP20930 4061 aaPredicted RBP4.21□□□□□ -1.74
SNHG16-202ENST00000493536 P0C880 135 aa4.2□□□□□ -1.74
SNHG16-202ENST00000493536 H0YAA0 97 aa4.2□□□□□ -1.74
SNHG16-202ENST00000493536 A8MU10 97 aa4.19□□□□□ -1.74
SNHG16-202ENST00000493536 SPATA8Q6RVD6 105 aa4.18□□□□□ -1.74
SNHG16-202ENST00000493536 KRTAP4-8Q9BYQ9 185 aa4.18□□□□□ -1.74
SNHG16-202ENST00000493536 M0R2T5 61 aa4.17□□□□□ -1.74
SNHG16-202ENST00000493536 FAT4Q6V0I7 4981 aa4.15□□□□□ -1.75
SNHG16-202ENST00000493536 MT1HP80294 61 aa4.13□□□□□ -1.75
SNHG16-202ENST00000493536 KRTAP13-4Q3LI77 160 aa4.11□□□□□ -1.75
SNHG16-202ENST00000493536 R4GN34 69 aa4.11□□□□□ -1.75
SNHG16-202ENST00000493536 M0QZ58 72 aa4.1□□□□□ -1.75
SNHG16-202ENST00000493536 KTN1-AS1Q86SY8 53 aa4.1□□□□□ -1.75
SNHG16-202ENST00000493536 A0A0D9SG42 100 aa4.1□□□□□ -1.75
SNHG16-202ENST00000493536 K7ERS5 55 aa4.05□□□□□ -1.76
SNHG16-202ENST00000493536 LINC01554Q52M75 96 aa4.05□□□□□ -1.76
SNHG16-202ENST00000493536 A6NN06 94 aa4.02□□□□□ -1.77
SNHG16-202ENST00000493536 CRIPTQ9P021 101 aa4.02□□□□□ -1.77
SNHG16-202ENST00000493536 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
SNHG16-202ENST00000493536 KRTAP10-10P60014 251 aa3.99□□□□□ -1.77
SNHG16-202ENST00000493536 KRTAP9-2Q9BYQ4 174 aa3.97□□□□□ -1.77
SNHG16-202ENST00000493536 MT2AP02795 61 aa3.97□□□□□ -1.77
SNHG16-202ENST00000493536 KRTAP9-8Q9BYQ0 159 aa3.97□□□□□ -1.77
SNHG16-202ENST00000493536 KRTAP12-1P59990 96 aa3.96□□□□□ -1.78
SNHG16-202ENST00000493536 KRTAP12-2P59991 146 aa3.96□□□□□ -1.78
SNHG16-202ENST00000493536 KRTAP9-6A0A140TA67 174 aa3.95□□□□□ -1.78
SNHG16-202ENST00000493536 MT1FP04733 61 aa3.95□□□□□ -1.78
SNHG16-202ENST00000493536 KRTAP4-8A0A0G2JLE6 195 aa3.93□□□□□ -1.78
SNHG16-202ENST00000493536 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.93□□□□□ -1.78
SNHG16-202ENST00000493536 LCE3BQ5TA77 95 aa3.91□□□□□ -1.78
SNHG16-202ENST00000493536 SPRR2GQ9BYE4 73 aa3.91□□□□□ -1.78
SNHG16-202ENST00000493536 KRTAP19-1Q8IUB9 90 aa3.89□□□□□ -1.79
SNHG16-202ENST00000493536 LUZP6Q538Z0 58 aa3.87□□□□□ -1.79
SNHG16-202ENST00000493536 CAMK2N1Q7Z7J9 78 aa3.86□□□□□ -1.79
SNHG16-202ENST00000493536 KRTAP4-7Q9BYR0 210 aa3.86□□□□□ -1.79
SNHG16-202ENST00000493536 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
SNHG16-202ENST00000493536 ROMO1P60602 79 aa3.85□□□□□ -1.79
SNHG16-202ENST00000493536 PLAC4Q8WY50 150 aa3.84□□□□□ -1.79
SNHG16-202ENST00000493536 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
SNHG16-202ENST00000493536 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
SNHG16-202ENST00000493536 KRTAP19-8Q3LI54 63 aa3.78□□□□□ -1.81
SNHG16-202ENST00000493536 KRTAP9-9Q9BYP9 154 aa3.76□□□□□ -1.81
SNHG16-202ENST00000493536 KRTAP9-4Q9BYQ2 154 aa3.76□□□□□ -1.81
SNHG16-202ENST00000493536 LCE1DQ5T752 114 aa3.74□□□□□ -1.81
SNHG16-202ENST00000493536 C10orf95Q9H7T3 257 aa3.74□□□□□ -1.81
SNHG16-202ENST00000493536 MT1BP07438 61 aa3.73□□□□□ -1.81
SNHG16-202ENST00000493536 KRTAP4-9Q9BYQ8 210 aa3.7□□□□□ -1.82
SNHG16-202ENST00000493536 NDUFAF8A1L188 74 aa3.7□□□□□ -1.82
SNHG16-202ENST00000493536 KRTAP25-1Q3LHN0 102 aa3.68□□□□□ -1.82
SNHG16-202ENST00000493536 TNP1P09430 55 aa3.66□□□□□ -1.82
SNHG16-202ENST00000493536 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
SNHG16-202ENST00000493536 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
SNHG16-202ENST00000493536 MT1XP80297 61 aa3.63□□□□□ -1.83
SNHG16-202ENST00000493536 USH2AO75445 5202 aa3.62□□□□□ -1.83
SNHG16-202ENST00000493536 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
SNHG16-202ENST00000493536 KRTAP4-2Q9BYR5 136 aa3.59□□□□□ -1.83
SNHG16-202ENST00000493536 PP632Q6XCG6 107 aa3.55□□□□□ -1.84
SNHG16-202ENST00000493536 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
SNHG16-202ENST00000493536 KRTAP5-3Q6L8H2 238 aa3.53□□□□□ -1.84
SNHG16-202ENST00000493536 KRTAP10-7P60409 375 aaPredicted RBP3.5□□□□□ -1.85
SNHG16-202ENST00000493536 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
SNHG16-202ENST00000493536 SSPOA2VEC9 5147 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms