RNA–Protein interactions for RNA: ENST00000493298.1

TM4SF1-203, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 4

Gene TM4SF1, Length 702 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-203ENST00000493298 SSPOA2VEC9 5147 aa4.42□□□□□ -1.7
TM4SF1-203ENST00000493298 DMAC1Q96GE9 116 aa4.42□□□□□ -1.7
TM4SF1-203ENST00000493298 M0R2T5 61 aa4.41□□□□□ -1.7
TM4SF1-203ENST00000493298 SPANXA2-OT1Q8N9U9 137 aa4.41□□□□□ -1.7
TM4SF1-203ENST00000493298 MT2AP02795 61 aa4.39□□□□□ -1.71
TM4SF1-203ENST00000493298 NDUFC1O43677 76 aa4.38□□□□□ -1.71
TM4SF1-203ENST00000493298 H1FX-AS1Q4G0G2 97 aa4.38□□□□□ -1.71
TM4SF1-203ENST00000493298 MT1FP04733 61 aa4.37□□□□□ -1.71
TM4SF1-203ENST00000493298 LCA10Q71F78 164 aa4.35□□□□□ -1.71
TM4SF1-203ENST00000493298 KRTAP9-3Q9BYQ3 159 aa4.35□□□□□ -1.71
TM4SF1-203ENST00000493298 RBM12B-AS1Q9P1G2 102 aa4.35□□□□□ -1.71
TM4SF1-203ENST00000493298 LCE2BO14633 110 aa4.34□□□□□ -1.71
TM4SF1-203ENST00000493298 A8MUN3 132 aa4.32□□□□□ -1.72
TM4SF1-203ENST00000493298 FCGBPQ9Y6R7 5405 aaPredicted RBP4.31□□□□□ -1.72
TM4SF1-203ENST00000493298 FAM236DA0A1B0GTK5 79 aa4.31□□□□□ -1.72
TM4SF1-203ENST00000493298 FAM236CP0DP71 79 aa4.31□□□□□ -1.72
TM4SF1-203ENST00000493298 TMEM258P61165 79 aa4.31□□□□□ -1.72
TM4SF1-203ENST00000493298 COA5Q86WW8 74 aa4.29□□□□□ -1.72
TM4SF1-203ENST00000493298 ACYP2P14621 99 aa4.28□□□□□ -1.72
TM4SF1-203ENST00000493298 S4R3F8 94 aa4.27□□□□□ -1.73
TM4SF1-203ENST00000493298 KRTAP3-2Q9BYR7 98 aa4.26□□□□□ -1.73
TM4SF1-203ENST00000493298 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
TM4SF1-203ENST00000493298 ATP5EP56381 51 aaPredicted RBP4.23□□□□□ -1.73
TM4SF1-203ENST00000493298 KRTAP10-10P60014 251 aa4.21□□□□□ -1.74
TM4SF1-203ENST00000493298 KRTAP19-1Q8IUB9 90 aa4.21□□□□□ -1.74
TM4SF1-203ENST00000493298 SERP1Q9Y6X1 66 aa4.2□□□□□ -1.74
TM4SF1-203ENST00000493298 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
TM4SF1-203ENST00000493298 P0C880 135 aa4.16□□□□□ -1.74
TM4SF1-203ENST00000493298 RPS28P62857 69 aaKnown RBP4.16□□□□□ -1.74
TM4SF1-203ENST00000493298 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
TM4SF1-203ENST00000493298 KRTAP9-7A8MTY7 169 aa4.14□□□□□ -1.75
TM4SF1-203ENST00000493298 H0YAA0 97 aa4.14□□□□□ -1.75
TM4SF1-203ENST00000493298 CHKB-CPT1BH3BT56 60 aa4.13□□□□□ -1.75
TM4SF1-203ENST00000493298 MACF1Q9UPN3 7388 aaKnown RBP4.12□□□□□ -1.75
TM4SF1-203ENST00000493298 ADM2Q7Z4H4 148 aa4.11□□□□□ -1.75
TM4SF1-203ENST00000493298 SYNE2Q8WXH0 6885 aaKnown RBP4.1□□□□□ -1.75
TM4SF1-203ENST00000493298 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
TM4SF1-203ENST00000493298 KRTAP13-4Q3LI77 160 aa4.09□□□□□ -1.75
TM4SF1-203ENST00000493298 SMIM26A0A096LP01 95 aa4.06□□□□□ -1.76
TM4SF1-203ENST00000493298 Q1T7F1 81 aa4.06□□□□□ -1.76
TM4SF1-203ENST00000493298 SPTSSBQ8NFR3 76 aa4.04□□□□□ -1.76
TM4SF1-203ENST00000493298 SPRR2GQ9BYE4 73 aa4.04□□□□□ -1.76
TM4SF1-203ENST00000493298 MT1BP07438 61 aa4.03□□□□□ -1.76
TM4SF1-203ENST00000493298 Q5VV11 94 aa4.01□□□□□ -1.77
TM4SF1-203ENST00000493298 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
TM4SF1-203ENST00000493298 PSPHP1O15172 72 aa3.98□□□□□ -1.77
TM4SF1-203ENST00000493298 A0A1B0GU69 56 aa3.97□□□□□ -1.77
TM4SF1-203ENST00000493298 PRR15LQ9BU68 103 aa3.97□□□□□ -1.77
TM4SF1-203ENST00000493298 SPATA8Q6RVD6 105 aa3.96□□□□□ -1.78
TM4SF1-203ENST00000493298 A0A1B0GU33 70 aa3.94□□□□□ -1.78
TM4SF1-203ENST00000493298 CRIPTQ9P021 101 aa3.94□□□□□ -1.78
TM4SF1-203ENST00000493298 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
TM4SF1-203ENST00000493298 A8MU10 97 aa3.92□□□□□ -1.78
TM4SF1-203ENST00000493298 M0QZ58 72 aa3.92□□□□□ -1.78
TM4SF1-203ENST00000493298 V9GYY9 64 aa3.91□□□□□ -1.78
TM4SF1-203ENST00000493298 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
TM4SF1-203ENST00000493298 SEC61GP60059 68 aa3.88□□□□□ -1.79
TM4SF1-203ENST00000493298 R4GN34 69 aa3.88□□□□□ -1.79
TM4SF1-203ENST00000493298 MUC12Q9UKN1 5478 aa3.87□□□□□ -1.79
TM4SF1-203ENST00000493298 NEBP20929 6669 aa3.86□□□□□ -1.79
TM4SF1-203ENST00000493298 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
TM4SF1-203ENST00000493298 KRTAP12-2P59991 146 aa3.85□□□□□ -1.79
TM4SF1-203ENST00000493298 A0A0D9SG42 100 aa3.83□□□□□ -1.8
TM4SF1-203ENST00000493298 A6NN06 94 aa3.83□□□□□ -1.8
TM4SF1-203ENST00000493298 LINC01554Q52M75 96 aa3.83□□□□□ -1.8
TM4SF1-203ENST00000493298 UQCR11O14957 56 aa3.82□□□□□ -1.8
TM4SF1-203ENST00000493298 KMT2DO14686 5537 aa3.81□□□□□ -1.8
TM4SF1-203ENST00000493298 KRTAP5-9P26371 169 aa3.81□□□□□ -1.8
TM4SF1-203ENST00000493298 MT1XP80297 61 aa3.81□□□□□ -1.8
TM4SF1-203ENST00000493298 MIR22HGQ0VDD5 57 aa3.8□□□□□ -1.8
TM4SF1-203ENST00000493298 A6NED7 52 aa3.77□□□□□ -1.81
TM4SF1-203ENST00000493298 MDN1Q9NU22 5596 aa3.76□□□□□ -1.81
TM4SF1-203ENST00000493298 CDC42SE1Q9NRR8 79 aa3.74□□□□□ -1.81
TM4SF1-203ENST00000493298 SPINT4Q6UDR6 99 aa3.71□□□□□ -1.82
TM4SF1-203ENST00000493298 C10orf95Q9H7T3 257 aa3.7□□□□□ -1.82
TM4SF1-203ENST00000493298 PLAC4Q8WY50 150 aa3.69□□□□□ -1.82
TM4SF1-203ENST00000493298 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
TM4SF1-203ENST00000493298 BRK1Q8WUW1 75 aa3.64□□□□□ -1.83
TM4SF1-203ENST00000493298 KRTAP4-8A0A0G2JLE6 195 aa3.6□□□□□ -1.83
TM4SF1-203ENST00000493298 KRTAP4-8Q9BYQ9 185 aa3.6□□□□□ -1.83
TM4SF1-203ENST00000493298 KRTAP10-12P60413 245 aa3.59□□□□□ -1.83
TM4SF1-203ENST00000493298 KRTAP20-1Q3LI63 56 aa3.59□□□□□ -1.83
TM4SF1-203ENST00000493298 CAMK2N1Q7Z7J9 78 aa3.59□□□□□ -1.83
TM4SF1-203ENST00000493298 SPRR2FQ96RM1 72 aa3.58□□□□□ -1.84
TM4SF1-203ENST00000493298 PRO2289Q9P1D8 64 aa3.58□□□□□ -1.84
TM4SF1-203ENST00000493298 LCE1AQ5T7P2 110 aa3.57□□□□□ -1.84
TM4SF1-203ENST00000493298 KRTAP8-1Q8IUC2 63 aa3.54□□□□□ -1.84
TM4SF1-203ENST00000493298 SPRR2EP22531 72 aa3.52□□□□□ -1.85
TM4SF1-203ENST00000493298 SPRR2BP35325 72 aa3.52□□□□□ -1.85
TM4SF1-203ENST00000493298 SPRR2AP35326 72 aa3.52□□□□□ -1.85
TM4SF1-203ENST00000493298 KRTAP2-3P0C7H8 128 aa3.51□□□□□ -1.85
TM4SF1-203ENST00000493298 KRTAP2-4Q9BYR9 128 aa3.51□□□□□ -1.85
TM4SF1-203ENST00000493298 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
TM4SF1-203ENST00000493298 ROMO1P60602 79 aa3.49□□□□□ -1.85
TM4SF1-203ENST00000493298 K7ERS5 55 aa3.48□□□□□ -1.85
TM4SF1-203ENST00000493298 LCE3AQ5TA76 89 aa3.45□□□□□ -1.86
TM4SF1-203ENST00000493298 TNP1P09430 55 aa3.43□□□□□ -1.86
TM4SF1-203ENST00000493298 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
TM4SF1-203ENST00000493298 PMAIP1Q13794 54 aa3.42□□□□□ -1.86
TM4SF1-203ENST00000493298 KRTAP25-1Q3LHN0 102 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms