RNA–Protein interactions for RNA: ENST00000492896.1

SMARCC1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 4

Gene SMARCC1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-208ENST00000492896 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
SMARCC1-208ENST00000492896 MUC17Q685J3 4493 aa4.71□□□□□ -1.66
SMARCC1-208ENST00000492896 PSPHP1O15172 72 aa4.7□□□□□ -1.66
SMARCC1-208ENST00000492896 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
SMARCC1-208ENST00000492896 LORP23490 312 aaPredicted RBP4.69□□□□□ -1.66
SMARCC1-208ENST00000492896 Q5VV11 94 aa4.66□□□□□ -1.66
SMARCC1-208ENST00000492896 RBM12B-AS1Q9P1G2 102 aa4.65□□□□□ -1.67
SMARCC1-208ENST00000492896 HERC1Q15751 4861 aa4.64□□□□□ -1.67
SMARCC1-208ENST00000492896 A0A1B0GU69 56 aa4.63□□□□□ -1.67
SMARCC1-208ENST00000492896 S4R3F8 94 aa4.62□□□□□ -1.67
SMARCC1-208ENST00000492896 H1FX-AS1Q4G0G2 97 aa4.61□□□□□ -1.67
SMARCC1-208ENST00000492896 HMCN2Q8NDA2 5059 aa4.6□□□□□ -1.67
SMARCC1-208ENST00000492896 A6NED7 52 aa4.58□□□□□ -1.68
SMARCC1-208ENST00000492896 SEC61GP60059 68 aa4.58□□□□□ -1.68
SMARCC1-208ENST00000492896 LCA10Q71F78 164 aa4.58□□□□□ -1.68
SMARCC1-208ENST00000492896 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
SMARCC1-208ENST00000492896 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
SMARCC1-208ENST00000492896 PRO0628Q9UI54 55 aa4.52□□□□□ -1.69
SMARCC1-208ENST00000492896 CDC42SE1Q9NRR8 79 aa4.5□□□□□ -1.69
SMARCC1-208ENST00000492896 UQCR11O14957 56 aa4.49□□□□□ -1.69
SMARCC1-208ENST00000492896 CSAG1Q6PB30 78 aa4.48□□□□□ -1.69
SMARCC1-208ENST00000492896 A8MU10 97 aa4.46□□□□□ -1.7
SMARCC1-208ENST00000492896 MIR22HGQ0VDD5 57 aa4.46□□□□□ -1.7
SMARCC1-208ENST00000492896 A0A1B0GU33 70 aa4.45□□□□□ -1.7
SMARCC1-208ENST00000492896 KRTAP19-2Q3LHN2 52 aa4.45□□□□□ -1.7
SMARCC1-208ENST00000492896 SPATA8Q6RVD6 105 aa4.44□□□□□ -1.7
SMARCC1-208ENST00000492896 KRTAP10-6P60371 365 aaPredicted RBP4.42□□□□□ -1.7
SMARCC1-208ENST00000492896 ADM2Q7Z4H4 148 aa4.41□□□□□ -1.7
SMARCC1-208ENST00000492896 RNF213Q63HN8 5207 aa4.41□□□□□ -1.7
SMARCC1-208ENST00000492896 H0YAA0 97 aa4.4□□□□□ -1.71
SMARCC1-208ENST00000492896 FLGP20930 4061 aaPredicted RBP4.39□□□□□ -1.71
SMARCC1-208ENST00000492896 P0C880 135 aa4.38□□□□□ -1.71
SMARCC1-208ENST00000492896 PMAIP1Q13794 54 aa4.32□□□□□ -1.72
SMARCC1-208ENST00000492896 KRTAP13-4Q3LI77 160 aa4.32□□□□□ -1.72
SMARCC1-208ENST00000492896 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
SMARCC1-208ENST00000492896 MUC2Q02817 5179 aa4.32□□□□□ -1.72
SMARCC1-208ENST00000492896 UBR4Q5T4S7 5183 aa4.32□□□□□ -1.72
SMARCC1-208ENST00000492896 A6NN06 94 aa4.29□□□□□ -1.72
SMARCC1-208ENST00000492896 M0QZ58 72 aa4.29□□□□□ -1.72
SMARCC1-208ENST00000492896 A0A0D9SG42 100 aa4.26□□□□□ -1.73
SMARCC1-208ENST00000492896 K7ERS5 55 aa4.26□□□□□ -1.73
SMARCC1-208ENST00000492896 LOC100996750A0A140TA64 210 aa4.24□□□□□ -1.73
SMARCC1-208ENST00000492896 MT1HP80294 61 aa4.24□□□□□ -1.73
SMARCC1-208ENST00000492896 KRTAP4-6Q9BYQ5 205 aa4.24□□□□□ -1.73
SMARCC1-208ENST00000492896 R4GN34 69 aa4.24□□□□□ -1.73
SMARCC1-208ENST00000492896 M0R2T5 61 aa4.23□□□□□ -1.73
SMARCC1-208ENST00000492896 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
SMARCC1-208ENST00000492896 KTN1-AS1Q86SY8 53 aa4.19□□□□□ -1.74
SMARCC1-208ENST00000492896 CRIPTQ9P021 101 aa4.18□□□□□ -1.74
SMARCC1-208ENST00000492896 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
SMARCC1-208ENST00000492896 LINC01554Q52M75 96 aa4.17□□□□□ -1.74
SMARCC1-208ENST00000492896 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
SMARCC1-208ENST00000492896 SPINT4Q6UDR6 99 aa4.16□□□□□ -1.74
SMARCC1-208ENST00000492896 MT2AP02795 61 aa4.1□□□□□ -1.75
SMARCC1-208ENST00000492896 ROMO1P60602 79 aa4.08□□□□□ -1.76
SMARCC1-208ENST00000492896 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
SMARCC1-208ENST00000492896 MT1FP04733 61 aa4.07□□□□□ -1.76
SMARCC1-208ENST00000492896 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
SMARCC1-208ENST00000492896 PRAC1Q96KF2 57 aa4.05□□□□□ -1.76
SMARCC1-208ENST00000492896 SPRR2GQ9BYE4 73 aa4.05□□□□□ -1.76
SMARCC1-208ENST00000492896 KRTAP19-1Q8IUB9 90 aa4.02□□□□□ -1.77
SMARCC1-208ENST00000492896 CAMK2N1Q7Z7J9 78 aa4□□□□□ -1.77
SMARCC1-208ENST00000492896 PLAC4Q8WY50 150 aa3.96□□□□□ -1.78
SMARCC1-208ENST00000492896 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
SMARCC1-208ENST00000492896 KRTAP19-8Q3LI54 63 aa3.94□□□□□ -1.78
SMARCC1-208ENST00000492896 KRTAP9-3Q9BYQ3 159 aa3.93□□□□□ -1.78
SMARCC1-208ENST00000492896 C10orf95Q9H7T3 257 aa3.93□□□□□ -1.78
SMARCC1-208ENST00000492896 KRTAP4-8Q9BYQ9 185 aa3.92□□□□□ -1.78
SMARCC1-208ENST00000492896 MT1BP07438 61 aa3.88□□□□□ -1.79
SMARCC1-208ENST00000492896 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
SMARCC1-208ENST00000492896 KRTAP9-2Q9BYQ4 174 aa3.87□□□□□ -1.79
SMARCC1-208ENST00000492896 KRTAP9-6A0A140TA67 174 aa3.84□□□□□ -1.79
SMARCC1-208ENST00000492896 TNP1P09430 55 aa3.82□□□□□ -1.8
SMARCC1-208ENST00000492896 KRTAP4-12Q9BQ66 201 aa3.8□□□□□ -1.8
SMARCC1-208ENST00000492896 MT1XP80297 61 aa3.77□□□□□ -1.81
SMARCC1-208ENST00000492896 KRTAP10-5P60370 271 aa3.76□□□□□ -1.81
SMARCC1-208ENST00000492896 PP632Q6XCG6 107 aa3.75□□□□□ -1.81
SMARCC1-208ENST00000492896 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
SMARCC1-208ENST00000492896 USH2AO75445 5202 aa3.72□□□□□ -1.81
SMARCC1-208ENST00000492896 KRTAP23-1A1A580 65 aa3.72□□□□□ -1.81
SMARCC1-208ENST00000492896 LCE3BQ5TA77 95 aa3.7□□□□□ -1.82
SMARCC1-208ENST00000492896 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
SMARCC1-208ENST00000492896 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
SMARCC1-208ENST00000492896 H3BS24 57 aa3.64□□□□□ -1.83
SMARCC1-208ENST00000492896 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
SMARCC1-208ENST00000492896 LCE3AQ5TA76 89 aa3.63□□□□□ -1.83
SMARCC1-208ENST00000492896 KRTAP10-7P60409 375 aaPredicted RBP3.62□□□□□ -1.83
SMARCC1-208ENST00000492896 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
SMARCC1-208ENST00000492896 KRTAP4-8A0A0G2JLE6 195 aa3.58□□□□□ -1.84
SMARCC1-208ENST00000492896 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
SMARCC1-208ENST00000492896 KRTAP8-1Q8IUC2 63 aa3.55□□□□□ -1.84
SMARCC1-208ENST00000492896 LCE4AQ5TA78 99 aa3.5□□□□□ -1.85
SMARCC1-208ENST00000492896 KRTAP15-1Q3LI76 137 aa3.49□□□□□ -1.85
SMARCC1-208ENST00000492896 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
SMARCC1-208ENST00000492896 KRTAP12-3P60328 96 aa3.48□□□□□ -1.85
SMARCC1-208ENST00000492896 KRTAP9-7A8MTY7 169 aa3.46□□□□□ -1.86
SMARCC1-208ENST00000492896 FSIP2Q5CZC0 6907 aa3.45□□□□□ -1.86
SMARCC1-208ENST00000492896 KRTAP19-4Q3LI73 84 aa3.45□□□□□ -1.86
SMARCC1-208ENST00000492896 KRTAP4-7Q9BYR0 210 aa3.44□□□□□ -1.86
SMARCC1-208ENST00000492896 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms