RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 USH2AO75445 5202 aa4.99□□□□□ -1.61
CDC42SE1-206ENST00000492796 C5orf47Q569G3 176 aa4.99□□□□□ -1.61
CDC42SE1-206ENST00000492796 LCA10Q71F78 164 aa4.99□□□□□ -1.61
CDC42SE1-206ENST00000492796 OCR1Q9BZK8 76 aa4.99□□□□□ -1.61
CDC42SE1-206ENST00000492796 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
CDC42SE1-206ENST00000492796 CSAG1Q6PB30 78 aa4.98□□□□□ -1.61
CDC42SE1-206ENST00000492796 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
CDC42SE1-206ENST00000492796 MP68P56378 58 aa4.97□□□□□ -1.61
CDC42SE1-206ENST00000492796 CCDC179H3BU77 68 aa4.96□□□□□ -1.62
CDC42SE1-206ENST00000492796 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
CDC42SE1-206ENST00000492796 LINC00208Q96KT6 92 aa4.96□□□□□ -1.62
CDC42SE1-206ENST00000492796 FCGBPQ9Y6R7 5405 aaPredicted RBP4.96□□□□□ -1.62
CDC42SE1-206ENST00000492796 SYNE2Q8WXH0 6885 aaKnown RBP4.94□□□□□ -1.62
CDC42SE1-206ENST00000492796 FAM236AA0A1B0GUQ0 79 aa4.93□□□□□ -1.62
CDC42SE1-206ENST00000492796 FAM236BA0A1B0GV22 79 aa4.93□□□□□ -1.62
CDC42SE1-206ENST00000492796 A8MUN3 132 aa4.93□□□□□ -1.62
CDC42SE1-206ENST00000492796 H3BPC8 53 aa4.92□□□□□ -1.62
CDC42SE1-206ENST00000492796 KLKP1Q107X0 134 aa4.91□□□□□ -1.62
CDC42SE1-206ENST00000492796 COX7CP15954 63 aa4.89□□□□□ -1.63
CDC42SE1-206ENST00000492796 KRTAP19-1Q8IUB9 90 aa4.89□□□□□ -1.63
CDC42SE1-206ENST00000492796 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
CDC42SE1-206ENST00000492796 NDUFC1O43677 76 aa4.86□□□□□ -1.63
CDC42SE1-206ENST00000492796 KRTAP19-6Q3LI70 58 aa4.85□□□□□ -1.63
CDC42SE1-206ENST00000492796 SMIM20Q8N5G0 67 aa4.85□□□□□ -1.63
CDC42SE1-206ENST00000492796 SERP2Q8N6R1 65 aa4.84□□□□□ -1.63
CDC42SE1-206ENST00000492796 H0YAA0 97 aa4.83□□□□□ -1.64
CDC42SE1-206ENST00000492796 SPRR2GQ9BYE4 73 aa4.82□□□□□ -1.64
CDC42SE1-206ENST00000492796 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
CDC42SE1-206ENST00000492796 CRIPTQ9P021 101 aa4.81□□□□□ -1.64
CDC42SE1-206ENST00000492796 TRAV7A0A075B6U4 112 aa4.8□□□□□ -1.64
CDC42SE1-206ENST00000492796 RPS28P62857 69 aaKnown RBP4.78□□□□□ -1.64
CDC42SE1-206ENST00000492796 KRTAP19-8Q3LI54 63 aa4.77□□□□□ -1.65
CDC42SE1-206ENST00000492796 Q5VV11 94 aa4.77□□□□□ -1.65
CDC42SE1-206ENST00000492796 TMEM258P61165 79 aa4.76□□□□□ -1.65
CDC42SE1-206ENST00000492796 KRTAP4-8Q9BYQ9 185 aa4.76□□□□□ -1.65
CDC42SE1-206ENST00000492796 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
CDC42SE1-206ENST00000492796 MT1BP07438 61 aa4.73□□□□□ -1.65
CDC42SE1-206ENST00000492796 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
CDC42SE1-206ENST00000492796 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
CDC42SE1-206ENST00000492796 CYSTM1Q9H1C7 97 aa4.71□□□□□ -1.66
CDC42SE1-206ENST00000492796 ACYP2P14621 99 aa4.7□□□□□ -1.66
CDC42SE1-206ENST00000492796 C20orf197Q8N268 126 aa4.7□□□□□ -1.66
CDC42SE1-206ENST00000492796 NEBP20929 6669 aa4.7□□□□□ -1.66
CDC42SE1-206ENST00000492796 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
CDC42SE1-206ENST00000492796 A6NN06 94 aa4.67□□□□□ -1.66
CDC42SE1-206ENST00000492796 LCE4AQ5TA78 99 aa4.66□□□□□ -1.66
CDC42SE1-206ENST00000492796 H7BZZ5 65 aa4.65□□□□□ -1.67
CDC42SE1-206ENST00000492796 SPANXA2-OT1Q8N9U9 137 aa4.65□□□□□ -1.67
CDC42SE1-206ENST00000492796 SPTSSBQ8NFR3 76 aa4.65□□□□□ -1.67
CDC42SE1-206ENST00000492796 KRTAP20-1Q3LI63 56 aa4.64□□□□□ -1.67
CDC42SE1-206ENST00000492796 SERP1Q9Y6X1 66 aa4.64□□□□□ -1.67
CDC42SE1-206ENST00000492796 P0C880 135 aa4.63□□□□□ -1.67
CDC42SE1-206ENST00000492796 R4GN34 69 aa4.63□□□□□ -1.67
CDC42SE1-206ENST00000492796 CHKB-CPT1BH3BT56 60 aa4.62□□□□□ -1.67
CDC42SE1-206ENST00000492796 ATP5EP56381 51 aaPredicted RBP4.62□□□□□ -1.67
CDC42SE1-206ENST00000492796 KRTAP10-5P60370 271 aa4.62□□□□□ -1.67
CDC42SE1-206ENST00000492796 A0A0A0MQY5 61 aa4.59□□□□□ -1.67
CDC42SE1-206ENST00000492796 M0QZ58 72 aa4.58□□□□□ -1.68
CDC42SE1-206ENST00000492796 SMIM26A0A096LP01 95 aa4.57□□□□□ -1.68
CDC42SE1-206ENST00000492796 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
CDC42SE1-206ENST00000492796 PLAC4Q8WY50 150 aa4.55□□□□□ -1.68
CDC42SE1-206ENST00000492796 PRO2289Q9P1D8 64 aa4.52□□□□□ -1.69
CDC42SE1-206ENST00000492796 MUC12Q9UKN1 5478 aa4.51□□□□□ -1.69
CDC42SE1-206ENST00000492796 LINC01554Q52M75 96 aa4.49□□□□□ -1.69
CDC42SE1-206ENST00000492796 COA5Q86WW8 74 aa4.48□□□□□ -1.69
CDC42SE1-206ENST00000492796 MT1XP80297 61 aa4.47□□□□□ -1.69
CDC42SE1-206ENST00000492796 KRTAP9-9Q9BYP9 154 aa4.45□□□□□ -1.7
CDC42SE1-206ENST00000492796 KRTAP9-4Q9BYQ2 154 aa4.45□□□□□ -1.7
CDC42SE1-206ENST00000492796 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
CDC42SE1-206ENST00000492796 Q1T7F1 81 aa4.4□□□□□ -1.71
CDC42SE1-206ENST00000492796 KRTAP5-9P26371 169 aa4.39□□□□□ -1.71
CDC42SE1-206ENST00000492796 SEC61GP60059 68 aa4.39□□□□□ -1.71
CDC42SE1-206ENST00000492796 PRO0628Q9UI54 55 aa4.39□□□□□ -1.71
CDC42SE1-206ENST00000492796 KRTAP12-2P59991 146 aa4.38□□□□□ -1.71
CDC42SE1-206ENST00000492796 V9GYY9 64 aa4.37□□□□□ -1.71
CDC42SE1-206ENST00000492796 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
CDC42SE1-206ENST00000492796 KRTAP2-3P0C7H8 128 aa4.35□□□□□ -1.71
CDC42SE1-206ENST00000492796 KRTAP2-4Q9BYR9 128 aa4.35□□□□□ -1.71
CDC42SE1-206ENST00000492796 KMT2DO14686 5537 aa4.33□□□□□ -1.72
CDC42SE1-206ENST00000492796 BRK1Q8WUW1 75 aa4.33□□□□□ -1.72
CDC42SE1-206ENST00000492796 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
CDC42SE1-206ENST00000492796 KRTAP8-1Q8IUC2 63 aa4.29□□□□□ -1.72
CDC42SE1-206ENST00000492796 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
CDC42SE1-206ENST00000492796 A0A1B0GU33 70 aa4.28□□□□□ -1.72
CDC42SE1-206ENST00000492796 PSPHP1O15172 72 aa4.28□□□□□ -1.72
CDC42SE1-206ENST00000492796 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
CDC42SE1-206ENST00000492796 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
CDC42SE1-206ENST00000492796 A0A1B0GU69 56 aa4.26□□□□□ -1.73
CDC42SE1-206ENST00000492796 KRTAP10-7P60409 375 aaPredicted RBP4.26□□□□□ -1.73
CDC42SE1-206ENST00000492796 CAMK2N1Q7Z7J9 78 aa4.26□□□□□ -1.73
CDC42SE1-206ENST00000492796 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
CDC42SE1-206ENST00000492796 LCE5AQ5TCM9 118 aa4.25□□□□□ -1.73
CDC42SE1-206ENST00000492796 SPATA8Q6RVD6 105 aa4.25□□□□□ -1.73
CDC42SE1-206ENST00000492796 A0A0D9SG42 100 aa4.24□□□□□ -1.73
CDC42SE1-206ENST00000492796 PRR15LQ9BU68 103 aa4.23□□□□□ -1.73
CDC42SE1-206ENST00000492796 LINC01558Q9Y6Z2 57 aa4.22□□□□□ -1.73
CDC42SE1-206ENST00000492796 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
CDC42SE1-206ENST00000492796 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
CDC42SE1-206ENST00000492796 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
CDC42SE1-206ENST00000492796 KRTAP2-1Q9BYU5 128 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms