RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 ATOX1O00244 68 aa3.29□□□□□ -1.88
PDLIM1-204ENST00000492511 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
PDLIM1-204ENST00000492511 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
PDLIM1-204ENST00000492511 J3QR89 54 aa3.28□□□□□ -1.88
PDLIM1-204ENST00000492511 KRTAP6-3Q3LI67 103 aa3.27□□□□□ -1.89
PDLIM1-204ENST00000492511 LINC00208Q96KT6 92 aa3.27□□□□□ -1.89
PDLIM1-204ENST00000492511 FAM236AA0A1B0GUQ0 79 aa3.24□□□□□ -1.89
PDLIM1-204ENST00000492511 FAM236BA0A1B0GV22 79 aa3.24□□□□□ -1.89
PDLIM1-204ENST00000492511 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
PDLIM1-204ENST00000492511 MT-ATP8P03928 68 aa3.23□□□□□ -1.89
PDLIM1-204ENST00000492511 MT1BP07438 61 aa3.23□□□□□ -1.89
PDLIM1-204ENST00000492511 MP68P56378 58 aa3.23□□□□□ -1.89
PDLIM1-204ENST00000492511 A8MUN3 132 aa3.22□□□□□ -1.89
PDLIM1-204ENST00000492511 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
PDLIM1-204ENST00000492511 H3BPC8 53 aa3.21□□□□□ -1.9
PDLIM1-204ENST00000492511 IMUPQ9GZP8 106 aa3.21□□□□□ -1.9
PDLIM1-204ENST00000492511 NDUFC1O43677 76 aa3.2□□□□□ -1.9
PDLIM1-204ENST00000492511 SCGB1A1P11684 91 aa3.2□□□□□ -1.9
PDLIM1-204ENST00000492511 KRTAP4-8Q9BYQ9 185 aa3.2□□□□□ -1.9
PDLIM1-204ENST00000492511 K7ERU9 68 aa3.19□□□□□ -1.9
PDLIM1-204ENST00000492511 NEBP20929 6669 aa3.19□□□□□ -1.9
PDLIM1-204ENST00000492511 H0YAA0 97 aa3.18□□□□□ -1.9
PDLIM1-204ENST00000492511 Q5VV11 94 aa3.17□□□□□ -1.9
PDLIM1-204ENST00000492511 DMAC1Q96GE9 116 aa3.17□□□□□ -1.9
PDLIM1-204ENST00000492511 KRTAP20-1Q3LI63 56 aa3.16□□□□□ -1.9
PDLIM1-204ENST00000492511 CRIPTQ9P021 101 aa3.16□□□□□ -1.9
PDLIM1-204ENST00000492511 TRAV7A0A075B6U4 112 aa3.15□□□□□ -1.91
PDLIM1-204ENST00000492511 ADM2Q7Z4H4 148 aa3.15□□□□□ -1.91
PDLIM1-204ENST00000492511 SMIM20Q8N5G0 67 aa3.13□□□□□ -1.91
PDLIM1-204ENST00000492511 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
PDLIM1-204ENST00000492511 KRTAP10-5P60370 271 aa3.12□□□□□ -1.91
PDLIM1-204ENST00000492511 A6NN06 94 aa3.11□□□□□ -1.91
PDLIM1-204ENST00000492511 P0C880 135 aa3.11□□□□□ -1.91
PDLIM1-204ENST00000492511 SNURFQ9Y675 71 aa3.1□□□□□ -1.91
PDLIM1-204ENST00000492511 LCE3BQ5TA77 95 aa3.09□□□□□ -1.91
PDLIM1-204ENST00000492511 ACYP2P14621 99 aa3.08□□□□□ -1.92
PDLIM1-204ENST00000492511 SERP2Q8N6R1 65 aa3.06□□□□□ -1.92
PDLIM1-204ENST00000492511 C20orf197Q8N268 126 aa3.05□□□□□ -1.92
PDLIM1-204ENST00000492511 MT1XP80297 61 aa3.04□□□□□ -1.92
PDLIM1-204ENST00000492511 R4GN34 69 aa3.04□□□□□ -1.92
PDLIM1-204ENST00000492511 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
PDLIM1-204ENST00000492511 KMT2DO14686 5537 aa3.04□□□□□ -1.92
PDLIM1-204ENST00000492511 M0QZ58 72 aa3.03□□□□□ -1.92
PDLIM1-204ENST00000492511 SPANXA2-OT1Q8N9U9 137 aa3.03□□□□□ -1.92
PDLIM1-204ENST00000492511 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
PDLIM1-204ENST00000492511 KRTAP2-3P0C7H8 128 aa3.02□□□□□ -1.93
PDLIM1-204ENST00000492511 KRTAP2-4Q9BYR9 128 aa3.02□□□□□ -1.93
PDLIM1-204ENST00000492511 KRTAP5-9P26371 169 aa3.01□□□□□ -1.93
PDLIM1-204ENST00000492511 CHKB-CPT1BH3BT56 60 aa3□□□□□ -1.93
PDLIM1-204ENST00000492511 SPTSSBQ8NFR3 76 aa3□□□□□ -1.93
PDLIM1-204ENST00000492511 PLAC4Q8WY50 150 aa3□□□□□ -1.93
PDLIM1-204ENST00000492511 COX7CP15954 63 aa2.99□□□□□ -1.93
PDLIM1-204ENST00000492511 LINC01554Q52M75 96 aa2.98□□□□□ -1.93
PDLIM1-204ENST00000492511 KRTAP9-9Q9BYP9 154 aa2.98□□□□□ -1.93
PDLIM1-204ENST00000492511 KRTAP9-4Q9BYQ2 154 aa2.98□□□□□ -1.93
PDLIM1-204ENST00000492511 CYSTM1Q9H1C7 97 aa2.98□□□□□ -1.93
PDLIM1-204ENST00000492511 PRO2289Q9P1D8 64 aa2.96□□□□□ -1.94
PDLIM1-204ENST00000492511 H7BZZ5 65 aa2.95□□□□□ -1.94
PDLIM1-204ENST00000492511 COA5Q86WW8 74 aa2.95□□□□□ -1.94
PDLIM1-204ENST00000492511 KRTAP4-8A0A0G2JLE6 195 aa2.94□□□□□ -1.94
PDLIM1-204ENST00000492511 KRTAP13-4Q3LI77 160 aa2.94□□□□□ -1.94
PDLIM1-204ENST00000492511 KRTAP12-2P59991 146 aa2.93□□□□□ -1.94
PDLIM1-204ENST00000492511 SPRR2EP22531 72 aa2.92□□□□□ -1.94
PDLIM1-204ENST00000492511 SPRR2BP35325 72 aa2.92□□□□□ -1.94
PDLIM1-204ENST00000492511 SPRR2AP35326 72 aa2.92□□□□□ -1.94
PDLIM1-204ENST00000492511 KRTAP10-7P60409 375 aaPredicted RBP2.9□□□□□ -1.95
PDLIM1-204ENST00000492511 SPRR2FQ96RM1 72 aa2.9□□□□□ -1.95
PDLIM1-204ENST00000492511 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
PDLIM1-204ENST00000492511 KRTAP2-1Q9BYU5 128 aa2.9□□□□□ -1.95
PDLIM1-204ENST00000492511 KRTAP10-12P60413 245 aa2.88□□□□□ -1.95
PDLIM1-204ENST00000492511 ANAPC13Q9BS18 74 aa2.88□□□□□ -1.95
PDLIM1-204ENST00000492511 CCDC179H3BU77 68 aa2.87□□□□□ -1.95
PDLIM1-204ENST00000492511 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
PDLIM1-204ENST00000492511 KRTAP8-1Q8IUC2 63 aa2.87□□□□□ -1.95
PDLIM1-204ENST00000492511 SPRR2DP22532 72 aa2.84□□□□□ -1.95
PDLIM1-204ENST00000492511 SPATA8Q6RVD6 105 aa2.84□□□□□ -1.95
PDLIM1-204ENST00000492511 KRTAP4-7Q9BYR0 210 aa2.84□□□□□ -1.95
PDLIM1-204ENST00000492511 SERP1Q9Y6X1 66 aa2.84□□□□□ -1.95
PDLIM1-204ENST00000492511 SEC61GP60059 68 aa2.83□□□□□ -1.96
PDLIM1-204ENST00000492511 A0A1B0GU33 70 aa2.82□□□□□ -1.96
PDLIM1-204ENST00000492511 A0A0D9SG42 100 aa2.81□□□□□ -1.96
PDLIM1-204ENST00000492511 LCE1AQ5T7P2 110 aa2.81□□□□□ -1.96
PDLIM1-204ENST00000492511 KRTAP12-1P59990 96 aa2.79□□□□□ -1.96
PDLIM1-204ENST00000492511 CAMK2N1Q7Z7J9 78 aa2.79□□□□□ -1.96
PDLIM1-204ENST00000492511 A0A1B0GU69 56 aa2.77□□□□□ -1.97
PDLIM1-204ENST00000492511 KRTAP4-9Q9BYQ8 210 aa2.77□□□□□ -1.97
PDLIM1-204ENST00000492511 ATP5EP56381 51 aaPredicted RBP2.76□□□□□ -1.97
PDLIM1-204ENST00000492511 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
PDLIM1-204ENST00000492511 A8MU10 97 aa2.75□□□□□ -1.97
PDLIM1-204ENST00000492511 GPR98Q8WXG9 6306 aa2.75□□□□□ -1.97
PDLIM1-204ENST00000492511 KRTAP19-4Q3LI73 84 aa2.74□□□□□ -1.97
PDLIM1-204ENST00000492511 SMIM26A0A096LP01 95 aa2.72□□□□□ -1.97
PDLIM1-204ENST00000492511 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
PDLIM1-204ENST00000492511 LINC01558Q9Y6Z2 57 aa2.72□□□□□ -1.97
PDLIM1-204ENST00000492511 TMEM258P61165 79 aa2.71□□□□□ -1.98
PDLIM1-204ENST00000492511 KRTAP19-7Q3SYF9 63 aa2.71□□□□□ -1.98
PDLIM1-204ENST00000492511 KRTAP4-2Q9BYR5 136 aa2.71□□□□□ -1.98
PDLIM1-204ENST00000492511 H3BS24 57 aa2.68□□□□□ -1.98
PDLIM1-204ENST00000492511 MT1EP04732 61 aa2.68□□□□□ -1.98
PDLIM1-204ENST00000492511 PRR15LQ9BU68 103 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms