RNA–Protein interactions for RNA: ENST00000492269.1

NPM1P28-201, Transcript of nucleophosmin 1 pseudogene 28, humanhuman

BASIC

Gene NPM1P28, Length 840 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P28-201ENST00000492269 TENM4Q6N022 2769 aa2.73□□□□□ -1.97
NPM1P28-201ENST00000492269 SRRM2Q9UQ35 2752 aaKnown RBP2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 FBN2P35556 2912 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 ABCA12Q86UK0 2595 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 ZNF292O60281 2723 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 HIVEP1P15822 2718 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 CFAP46Q8IYW2 2715 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 FRAS1Q86XX4 4008 aa2.72□□□□□ -1.97
NPM1P28-201ENST00000492269 ZANQ9Y493 2812 aa2.7□□□□□ -1.98
NPM1P28-201ENST00000492269 SETD2Q9BYW2 2564 aaPredicted RBP2.7□□□□□ -1.98
NPM1P28-201ENST00000492269 HECTD1Q9ULT8 2610 aa2.7□□□□□ -1.98
NPM1P28-201ENST00000492269 MUC3AQ02505 3323 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 FASNP49327 2511 aaKnown RBP2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 VWFP04275 2813 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 DNAH3Q8TD57 4116 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 FAM208BQ5VWN6 2430 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 CSMD2Q7Z408 3487 aa2.69□□□□□ -1.98
NPM1P28-201ENST00000492269 ANK2Q01484 3957 aa2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 R4GN34 69 aa2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 FBN1P35555 2871 aaKnown RBP2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 CMYA5Q8N3K9 4069 aa2.68□□□□□ -1.98
NPM1P28-201ENST00000492269 BDP1A6H8Y1 2624 aa2.67□□□□□ -1.98
NPM1P28-201ENST00000492269 TGP01266 2768 aa2.66□□□□□ -1.98
NPM1P28-201ENST00000492269 ITPR3Q14573 2671 aa2.66□□□□□ -1.98
NPM1P28-201ENST00000492269 DNAH8Q96JB1 4490 aa2.66□□□□□ -1.98
NPM1P28-201ENST00000492269 CACNA1AO00555 2505 aa2.65□□□□□ -1.99
NPM1P28-201ENST00000492269 SMR3AQ99954 134 aa2.64□□□□□ -1.99
NPM1P28-201ENST00000492269 DMBT1Q9UGM3 2413 aaPredicted RBP2.64□□□□□ -1.99
NPM1P28-201ENST00000492269 BAHCC1Q9P281 2608 aa2.64□□□□□ -1.99
NPM1P28-201ENST00000492269 DYNC2H1Q8NCM8 4307 aaKnown RBP2.63□□□□□ -1.99
NPM1P28-201ENST00000492269 KRTAP12-4P60329 112 aa2.63□□□□□ -1.99
NPM1P28-201ENST00000492269 DNAH7Q8WXX0 4024 aa2.63□□□□□ -1.99
NPM1P28-201ENST00000492269 PRKDCP78527 4128 aaKnown RBP2.62□□□□□ -1.99
NPM1P28-201ENST00000492269 NIPBLQ6KC79 2804 aaeCLIP2.62□□□□□ -1.99
NPM1P28-201ENST00000492269 PKD1L1Q8TDX9 2849 aa2.61□□□□□ -1.99
NPM1P28-201ENST00000492269 Q5VSD8 79 aa2.61□□□□□ -1.99
NPM1P28-201ENST00000492269 MYO18BQ8IUG5 2567 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 STAB2Q8WWQ8 2551 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 CUBNO60494 3623 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 NBEAL1Q6ZS30 2694 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 TENM3Q9P273 2699 aa2.6□□□□□ -1.99
NPM1P28-201ENST00000492269 FLNAP21333 2647 aaKnown RBP2.59□□□□□ -1.99
NPM1P28-201ENST00000492269 DNAH6Q9C0G6 4158 aa2.59□□□□□ -1.99
NPM1P28-201ENST00000492269 POLQO75417 2590 aa2.59□□□□□ -1.99
NPM1P28-201ENST00000492269 PDZD2O15018 2839 aa2.59□□□□□ -2
NPM1P28-201ENST00000492269 DNAH10Q8IVF4 4471 aa2.58□□□□□ -2
NPM1P28-201ENST00000492269 ITPR2Q14571 2701 aa2.58□□□□□ -2
NPM1P28-201ENST00000492269 LYSTQ99698 3801 aa2.58□□□□□ -2
NPM1P28-201ENST00000492269 DNAH17Q9UFH2 4485 aa2.57□□□□□ -2
NPM1P28-201ENST00000492269 CSMD3Q7Z407 3707 aa2.56□□□□□ -2
NPM1P28-201ENST00000492269 C9orf92A6NGG3 77 aa2.56□□□□□ -2
NPM1P28-201ENST00000492269 DNAH9Q9NYC9 4486 aa2.55□□□□□ -2
NPM1P28-201ENST00000492269 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 ATRQ13535 2644 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 HUWE1Q7Z6Z7 4374 aaKnown RBP2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 TEP1Q99973 2627 aaKnown RBP2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 KRTAP12-3P60328 96 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 COL7A1Q02388 2944 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 DNAH2Q9P225 4427 aa2.52□□□□□ -2.01
NPM1P28-201ENST00000492269 HECTD4Q9Y4D8 3996 aa2.51□□□□□ -2.01
NPM1P28-201ENST00000492269 ZNF469Q96JG9 3925 aaPredicted RBP2.5□□□□□ -2.01
NPM1P28-201ENST00000492269 SACSQ9NZJ4 4579 aa2.5□□□□□ -2.01
NPM1P28-201ENST00000492269 MAST4O15021 2626 aa2.5□□□□□ -2.01
NPM1P28-201ENST00000492269 NSD1Q96L73 2696 aaPredicted RBP2.49□□□□□ -2.01
NPM1P28-201ENST00000492269 NOTCH1P46531 2555 aa2.48□□□□□ -2.01
NPM1P28-201ENST00000492269 TNP1P09430 55 aa2.48□□□□□ -2.01
NPM1P28-201ENST00000492269 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
NPM1P28-201ENST00000492269 FLNBO75369 2602 aaKnown RBP2.47□□□□□ -2.01
NPM1P28-201ENST00000492269 MGAM2Q2M2H8 2515 aa2.46□□□□□ -2.01
NPM1P28-201ENST00000492269 FLNCQ14315 2725 aa2.46□□□□□ -2.02
NPM1P28-201ENST00000492269 IGSF10Q6WRI0 2623 aa2.43□□□□□ -2.02
NPM1P28-201ENST00000492269 USP24Q9UPU5 2620 aa2.43□□□□□ -2.02
NPM1P28-201ENST00000492269 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
NPM1P28-201ENST00000492269 STAB1Q9NY15 2570 aa2.41□□□□□ -2.02
NPM1P28-201ENST00000492269 CRCT1Q9UGL9 99 aa2.41□□□□□ -2.02
NPM1P28-201ENST00000492269 KMT2AQ03164 3969 aa2.41□□□□□ -2.02
NPM1P28-201ENST00000492269 KRTAP6-3Q3LI67 103 aa2.39□□□□□ -2.03
NPM1P28-201ENST00000492269 TENM1Q9UKZ4 2725 aa2.38□□□□□ -2.03
NPM1P28-201ENST00000492269 MYCBP2O75592 4640 aa2.37□□□□□ -2.03
NPM1P28-201ENST00000492269 J3QKU1 62 aa2.36□□□□□ -2.03
NPM1P28-201ENST00000492269 PKHD1P08F94 4074 aa2.34□□□□□ -2.03
NPM1P28-201ENST00000492269 VPS13BQ7Z7G8 4022 aa2.34□□□□□ -2.03
NPM1P28-201ENST00000492269 PKD1P98161 4303 aa2.34□□□□□ -2.03
NPM1P28-201ENST00000492269 LRP1Q07954 4544 aaKnown RBP2.34□□□□□ -2.04
NPM1P28-201ENST00000492269 KRTAP10-4P60372 401 aaPredicted RBP2.33□□□□□ -2.04
NPM1P28-201ENST00000492269 PLECQ15149 4684 aaKnown RBP2.33□□□□□ -2.04
NPM1P28-201ENST00000492269 DNAH5Q8TE73 4624 aa2.31□□□□□ -2.04
NPM1P28-201ENST00000492269 KRTAP4-1Q9BYQ7 146 aa2.31□□□□□ -2.04
NPM1P28-201ENST00000492269 TNXBP22105 4242 aa2.31□□□□□ -2.04
NPM1P28-201ENST00000492269 APOBP04114 4563 aaKnown RBP2.3□□□□□ -2.04
NPM1P28-201ENST00000492269 HSPG2P98160 4391 aa2.28□□□□□ -2.04
NPM1P28-201ENST00000492269 FAT2Q9NYQ8 4349 aa2.28□□□□□ -2.05
NPM1P28-201ENST00000492269 KRTAP8-1Q8IUC2 63 aa2.27□□□□□ -2.05
NPM1P28-201ENST00000492269 FLGP20930 4061 aaPredicted RBP2.27□□□□□ -2.05
NPM1P28-201ENST00000492269 LRP1BQ9NZR2 4599 aa2.26□□□□□ -2.05
NPM1P28-201ENST00000492269 DYNC1H1Q14204 4646 aaKnown RBP2.25□□□□□ -2.05
NPM1P28-201ENST00000492269 STARD9Q9P2P6 4700 aa2.24□□□□□ -2.05
NPM1P28-201ENST00000492269 FCGBPQ9Y6R7 5405 aaPredicted RBP2.18□□□□□ -2.06
NPM1P28-201ENST00000492269 FAT3Q8TDW7 4589 aa2.18□□□□□ -2.06
NPM1P28-201ENST00000492269 FAT1Q14517 4588 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms