RNA–Protein interactions for RNA: ENST00000492136.1

UBP1-212, Transcript of upstream binding protein 1, humanhuman

TSL 2

Gene UBP1, Length 7,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1-212ENST00000492136 RYR3Q15413 4870 aa3.11□□□□□ -1.91
UBP1-212ENST00000492136 FRAS1Q86XX4 4008 aa3.07□□□□□ -1.92
UBP1-212ENST00000492136 ALMS1Q8TCU4 4167 aa3.05□□□□□ -1.92
UBP1-212ENST00000492136 MEGF8Q7Z7M0 2845 aa3.05□□□□□ -1.92
UBP1-212ENST00000492136 OTOGQ6ZRI0 2925 aa3.05□□□□□ -1.92
UBP1-212ENST00000492136 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
UBP1-212ENST00000492136 EPPK1P58107 5090 aaKnown RBP3.04□□□□□ -1.92
UBP1-212ENST00000492136 UBR4Q5T4S7 5183 aa3.03□□□□□ -1.92
UBP1-212ENST00000492136 KRTAP4-5Q9BYR2 181 aa3.03□□□□□ -1.92
UBP1-212ENST00000492136 CMYA5Q8N3K9 4069 aa3.02□□□□□ -1.93
UBP1-212ENST00000492136 COL7A1Q02388 2944 aa3.02□□□□□ -1.93
UBP1-212ENST00000492136 SPRR2EP22531 72 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 SPRR2BP35325 72 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 SPRR2AP35326 72 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
UBP1-212ENST00000492136 FBN3Q75N90 2809 aa2.98□□□□□ -1.93
UBP1-212ENST00000492136 HUWE1Q7Z6Z7 4374 aaKnown RBP2.98□□□□□ -1.93
UBP1-212ENST00000492136 ANK3Q12955 4377 aaKnown RBP2.98□□□□□ -1.93
UBP1-212ENST00000492136 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
UBP1-212ENST00000492136 ZNF469Q96JG9 3925 aaPredicted RBP2.97□□□□□ -1.93
UBP1-212ENST00000492136 BIRC6Q9NR09 4857 aa2.97□□□□□ -1.93
UBP1-212ENST00000492136 HERC2O95714 4834 aa2.96□□□□□ -1.94
UBP1-212ENST00000492136 KRTAP3-3Q9BYR6 98 aa2.91□□□□□ -1.94
UBP1-212ENST00000492136 HMCN2Q8NDA2 5059 aa2.91□□□□□ -1.94
UBP1-212ENST00000492136 KMT2CQ8NEZ4 4911 aaKnown RBP2.91□□□□□ -1.94
UBP1-212ENST00000492136 DNAH3Q8TD57 4116 aa2.9□□□□□ -1.94
UBP1-212ENST00000492136 KRTAP3-2Q9BYR7 98 aa2.89□□□□□ -1.95
UBP1-212ENST00000492136 RNF213Q63HN8 5207 aa2.88□□□□□ -1.95
UBP1-212ENST00000492136 SPRR2DP22532 72 aa2.88□□□□□ -1.95
UBP1-212ENST00000492136 ANK2Q01484 3957 aa2.87□□□□□ -1.95
UBP1-212ENST00000492136 PLECQ15149 4684 aaKnown RBP2.87□□□□□ -1.95
UBP1-212ENST00000492136 DNAH2Q9P225 4427 aa2.87□□□□□ -1.95
UBP1-212ENST00000492136 LYSTQ99698 3801 aa2.86□□□□□ -1.95
UBP1-212ENST00000492136 DNAH7Q8WXX0 4024 aa2.85□□□□□ -1.95
UBP1-212ENST00000492136 KMT2AQ03164 3969 aa2.82□□□□□ -1.96
UBP1-212ENST00000492136 KRTAP10-4P60372 401 aaPredicted RBP2.8□□□□□ -1.96
UBP1-212ENST00000492136 MT1HL1P0DM35 61 aa2.79□□□□□ -1.96
UBP1-212ENST00000492136 VPS13BQ7Z7G8 4022 aa2.79□□□□□ -1.96
UBP1-212ENST00000492136 KRTAP23-1A1A580 65 aa2.79□□□□□ -1.96
UBP1-212ENST00000492136 DNAH6Q9C0G6 4158 aa2.77□□□□□ -1.97
UBP1-212ENST00000492136 PRKDCP78527 4128 aaKnown RBP2.77□□□□□ -1.97
UBP1-212ENST00000492136 LCE3BQ5TA77 95 aa2.76□□□□□ -1.97
UBP1-212ENST00000492136 DNAH1Q9P2D7 4330 aa2.76□□□□□ -1.97
UBP1-212ENST00000492136 MT4P47944 62 aa2.74□□□□□ -1.97
UBP1-212ENST00000492136 DYNC1H1Q14204 4646 aaKnown RBP2.72□□□□□ -1.97
UBP1-212ENST00000492136 LCE2BO14633 110 aa2.71□□□□□ -1.98
UBP1-212ENST00000492136 HECTD4Q9Y4D8 3996 aa2.7□□□□□ -1.98
UBP1-212ENST00000492136 DNAH10Q8IVF4 4471 aa2.7□□□□□ -1.98
UBP1-212ENST00000492136 LCE2CQ5TA81 110 aa2.69□□□□□ -1.98
UBP1-212ENST00000492136 DNAH8Q96JB1 4490 aa2.68□□□□□ -1.98
UBP1-212ENST00000492136 HERC1Q15751 4861 aa2.67□□□□□ -1.98
UBP1-212ENST00000492136 LCE2DQ5TA82 110 aaPredicted RBP2.67□□□□□ -1.98
UBP1-212ENST00000492136 LRP1BQ9NZR2 4599 aa2.64□□□□□ -1.99
UBP1-212ENST00000492136 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
UBP1-212ENST00000492136 KRTAP12-4P60329 112 aa2.62□□□□□ -1.99
UBP1-212ENST00000492136 DNAH9Q9NYC9 4486 aa2.61□□□□□ -1.99
UBP1-212ENST00000492136 FAT2Q9NYQ8 4349 aa2.61□□□□□ -1.99
UBP1-212ENST00000492136 KRTAP17-1Q9BYP8 105 aa2.6□□□□□ -1.99
UBP1-212ENST00000492136 VPS13DQ5THJ4 4388 aa2.6□□□□□ -1.99
UBP1-212ENST00000492136 LCE3CQ5T5A8 94 aa2.59□□□□□ -1.99
UBP1-212ENST00000492136 LCE1BQ5T7P3 118 aa2.59□□□□□ -2
UBP1-212ENST00000492136 FLGP20930 4061 aaPredicted RBP2.59□□□□□ -2
UBP1-212ENST00000492136 MT1HP80294 61 aa2.58□□□□□ -2
UBP1-212ENST00000492136 FAT4Q6V0I7 4981 aa2.56□□□□□ -2
UBP1-212ENST00000492136 DNAH11Q96DT5 4516 aa2.56□□□□□ -2
UBP1-212ENST00000492136 MT1GP13640 62 aa2.56□□□□□ -2
UBP1-212ENST00000492136 STARD9Q9P2P6 4700 aa2.55□□□□□ -2
UBP1-212ENST00000492136 SACSQ9NZJ4 4579 aa2.54□□□□□ -2
UBP1-212ENST00000492136 DNAH5Q8TE73 4624 aa2.54□□□□□ -2
UBP1-212ENST00000492136 USH2AO75445 5202 aa2.54□□□□□ -2
UBP1-212ENST00000492136 SPRR2GQ9BYE4 73 aa2.54□□□□□ -2
UBP1-212ENST00000492136 DYNC2H1Q8NCM8 4307 aaKnown RBP2.53□□□□□ -2
UBP1-212ENST00000492136 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
UBP1-212ENST00000492136 LCE3EQ5T5B0 92 aa2.52□□□□□ -2.01
UBP1-212ENST00000492136 APOBP04114 4563 aaKnown RBP2.5□□□□□ -2.01
UBP1-212ENST00000492136 LCE1DQ5T752 114 aa2.5□□□□□ -2.01
UBP1-212ENST00000492136 FAT1Q14517 4588 aa2.5□□□□□ -2.01
UBP1-212ENST00000492136 LCE5AQ5TCM9 118 aa2.49□□□□□ -2.01
UBP1-212ENST00000492136 DNAH17Q9UFH2 4485 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1CQ5T751 118 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1EQ5T753 118 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1FQ5T754 118 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 LCE1AQ5T7P2 110 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 SSPOA2VEC9 5147 aa2.48□□□□□ -2.01
UBP1-212ENST00000492136 MT2AP02795 61 aa2.47□□□□□ -2.01
UBP1-212ENST00000492136 PKD1P98161 4303 aa2.45□□□□□ -2.02
UBP1-212ENST00000492136 MT1FP04733 61 aa2.44□□□□□ -2.02
UBP1-212ENST00000492136 PKHD1L1Q86WI1 4243 aa2.42□□□□□ -2.02
UBP1-212ENST00000492136 KRTAP19-1Q8IUB9 90 aa2.4□□□□□ -2.02
UBP1-212ENST00000492136 KRTAP20-1Q3LI63 56 aa2.4□□□□□ -2.03
UBP1-212ENST00000492136 LCE3DQ9BYE3 92 aa2.39□□□□□ -2.03
UBP1-212ENST00000492136 MUC2Q02817 5179 aa2.38□□□□□ -2.03
UBP1-212ENST00000492136 KRTAP9-2Q9BYQ4 174 aa2.37□□□□□ -2.03
UBP1-212ENST00000492136 TNXBP22105 4242 aa2.36□□□□□ -2.03
UBP1-212ENST00000492136 MYCBP2O75592 4640 aa2.36□□□□□ -2.03
UBP1-212ENST00000492136 FAT3Q8TDW7 4589 aa2.35□□□□□ -2.03
UBP1-212ENST00000492136 KRTAP9-6A0A140TA67 174 aa2.34□□□□□ -2.03
UBP1-212ENST00000492136 PKHD1P08F94 4074 aa2.33□□□□□ -2.04
UBP1-212ENST00000492136 LCE2AQ5TA79 106 aaPredicted RBP2.32□□□□□ -2.04
UBP1-212ENST00000492136 KRTAP4-7Q9BYR0 210 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 186 ms