RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 ACYP1P07311 99 aa3.91□□□□□ -1.78
NUP50-217ENST00000491860 MT1BP07438 61 aa3.91□□□□□ -1.78
NUP50-217ENST00000491860 IMUPQ9GZP8 106 aa3.91□□□□□ -1.78
NUP50-217ENST00000491860 ATOX1O00244 68 aa3.9□□□□□ -1.79
NUP50-217ENST00000491860 ETDBQ3ZM63 59 aa3.89□□□□□ -1.79
NUP50-217ENST00000491860 ATP5EP2Q5VTU8 51 aa3.89□□□□□ -1.79
NUP50-217ENST00000491860 KRTAP10-5P60370 271 aa3.88□□□□□ -1.79
NUP50-217ENST00000491860 UQCRQO14949 82 aa3.87□□□□□ -1.79
NUP50-217ENST00000491860 NDUFC1O43677 76 aa3.87□□□□□ -1.79
NUP50-217ENST00000491860 KRTAP2-3P0C7H8 128 aa3.87□□□□□ -1.79
NUP50-217ENST00000491860 KRTAP2-4Q9BYR9 128 aa3.87□□□□□ -1.79
NUP50-217ENST00000491860 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
NUP50-217ENST00000491860 FAM240AA0A1B0GVK7 77 aa3.86□□□□□ -1.79
NUP50-217ENST00000491860 A8MUN3 132 aa3.86□□□□□ -1.79
NUP50-217ENST00000491860 H0YAA0 97 aa3.86□□□□□ -1.79
NUP50-217ENST00000491860 KMT2DO14686 5537 aa3.85□□□□□ -1.79
NUP50-217ENST00000491860 HIST1H4AP62805 103 aaKnown RBP3.83□□□□□ -1.8
NUP50-217ENST00000491860 H0Y9P7 68 aa3.82□□□□□ -1.8
NUP50-217ENST00000491860 PRO2289Q9P1D8 64 aa3.8□□□□□ -1.8
NUP50-217ENST00000491860 A0A087WVE0 104 aa3.78□□□□□ -1.8
NUP50-217ENST00000491860 MP68P56378 58 aa3.77□□□□□ -1.81
NUP50-217ENST00000491860 LINC00643Q86TS7 51 aa3.77□□□□□ -1.81
NUP50-217ENST00000491860 PCP4L1A6NKN8 68 aa3.76□□□□□ -1.81
NUP50-217ENST00000491860 ADM2Q7Z4H4 148 aa3.76□□□□□ -1.81
NUP50-217ENST00000491860 C20orf197Q8N268 126 aa3.76□□□□□ -1.81
NUP50-217ENST00000491860 LINC00208Q96KT6 92 aa3.75□□□□□ -1.81
NUP50-217ENST00000491860 PLAC4Q8WY50 150 aa3.74□□□□□ -1.81
NUP50-217ENST00000491860 H3BPC8 53 aa3.73□□□□□ -1.81
NUP50-217ENST00000491860 KRTAP2-2Q9BYT5 123 aa3.72□□□□□ -1.81
NUP50-217ENST00000491860 KRTAP2-1Q9BYU5 128 aa3.72□□□□□ -1.81
NUP50-217ENST00000491860 R4GN34 69 aa3.72□□□□□ -1.81
NUP50-217ENST00000491860 SPRR2EP22531 72 aa3.7□□□□□ -1.82
NUP50-217ENST00000491860 SPRR2BP35325 72 aa3.7□□□□□ -1.82
NUP50-217ENST00000491860 SPRR2AP35326 72 aa3.7□□□□□ -1.82
NUP50-217ENST00000491860 OCR1Q9BZK8 76 aa3.7□□□□□ -1.82
NUP50-217ENST00000491860 SPRR2FQ96RM1 72 aa3.67□□□□□ -1.82
NUP50-217ENST00000491860 J3QR89 54 aa3.66□□□□□ -1.82
NUP50-217ENST00000491860 MT1XP80297 61 aa3.66□□□□□ -1.82
NUP50-217ENST00000491860 DMAC1Q96GE9 116 aa3.66□□□□□ -1.82
NUP50-217ENST00000491860 M0QZ58 72 aa3.65□□□□□ -1.83
NUP50-217ENST00000491860 KRTAP12-2P59991 146 aa3.65□□□□□ -1.83
NUP50-217ENST00000491860 SCGB1A1P11684 91 aa3.64□□□□□ -1.83
NUP50-217ENST00000491860 KRTAP8-1Q8IUC2 63 aa3.64□□□□□ -1.83
NUP50-217ENST00000491860 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
NUP50-217ENST00000491860 TRAV7A0A075B6U4 112 aa3.62□□□□□ -1.83
NUP50-217ENST00000491860 P0C880 135 aa3.62□□□□□ -1.83
NUP50-217ENST00000491860 SPTSSBQ8NFR3 76 aa3.62□□□□□ -1.83
NUP50-217ENST00000491860 ACYP2P14621 99 aa3.59□□□□□ -1.83
NUP50-217ENST00000491860 SPRR2DP22532 72 aa3.58□□□□□ -1.84
NUP50-217ENST00000491860 LINC01554Q52M75 96 aa3.58□□□□□ -1.84
NUP50-217ENST00000491860 SMIM20Q8N5G0 67 aa3.57□□□□□ -1.84
NUP50-217ENST00000491860 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
NUP50-217ENST00000491860 MT-ATP8P03928 68 aa3.56□□□□□ -1.84
NUP50-217ENST00000491860 A0A1B0GV90 55 aa3.54□□□□□ -1.84
NUP50-217ENST00000491860 CHKB-CPT1BH3BT56 60 aa3.52□□□□□ -1.85
NUP50-217ENST00000491860 KRTAP10-12P60413 245 aa3.51□□□□□ -1.85
NUP50-217ENST00000491860 LCE3BQ5TA77 95 aa3.51□□□□□ -1.85
NUP50-217ENST00000491860 KRTAP4-8A0A0G2JLE6 195 aa3.49□□□□□ -1.85
NUP50-217ENST00000491860 KRTAP4-8Q9BYQ9 185 aa3.49□□□□□ -1.85
NUP50-217ENST00000491860 KRTAP10-7P60409 375 aaPredicted RBP3.47□□□□□ -1.85
NUP50-217ENST00000491860 K7ERU9 68 aa3.44□□□□□ -1.86
NUP50-217ENST00000491860 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
NUP50-217ENST00000491860 CAMK2N1Q7Z7J9 78 aa3.41□□□□□ -1.86
NUP50-217ENST00000491860 SNURFQ9Y675 71 aa3.39□□□□□ -1.87
NUP50-217ENST00000491860 DSTQ03001 7570 aaKnown RBP3.38□□□□□ -1.87
NUP50-217ENST00000491860 SEC61GP60059 68 aa3.37□□□□□ -1.87
NUP50-217ENST00000491860 SERP2Q8N6R1 65 aa3.35□□□□□ -1.87
NUP50-217ENST00000491860 SERP1Q9Y6X1 66 aa3.34□□□□□ -1.87
NUP50-217ENST00000491860 KRTAP13-4Q3LI77 160 aa3.33□□□□□ -1.88
NUP50-217ENST00000491860 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
NUP50-217ENST00000491860 COA5Q86WW8 74 aa3.3□□□□□ -1.88
NUP50-217ENST00000491860 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.88
NUP50-217ENST00000491860 LCE5AQ5TCM9 118 aa3.28□□□□□ -1.88
NUP50-217ENST00000491860 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.88
NUP50-217ENST00000491860 KRTAP19-3Q7Z4W3 81 aa3.27□□□□□ -1.89
NUP50-217ENST00000491860 A0A0D9SG42 100 aa3.26□□□□□ -1.89
NUP50-217ENST00000491860 A0A1B0GU33 70 aa3.26□□□□□ -1.89
NUP50-217ENST00000491860 MT1EP04732 61 aa3.26□□□□□ -1.89
NUP50-217ENST00000491860 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
NUP50-217ENST00000491860 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
NUP50-217ENST00000491860 SVIPQ8NHG7 77 aa3.25□□□□□ -1.89
NUP50-217ENST00000491860 LCE1DQ5T752 114 aa3.24□□□□□ -1.89
NUP50-217ENST00000491860 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
NUP50-217ENST00000491860 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
NUP50-217ENST00000491860 SMIM26A0A096LP01 95 aa3.22□□□□□ -1.89
NUP50-217ENST00000491860 COX7CP15954 63 aa3.22□□□□□ -1.89
NUP50-217ENST00000491860 PCP4P48539 62 aa3.22□□□□□ -1.89
NUP50-217ENST00000491860 HMCN1Q96RW7 5635 aa3.22□□□□□ -1.89
NUP50-217ENST00000491860 MT1GP13640 62 aa3.21□□□□□ -1.9
NUP50-217ENST00000491860 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
NUP50-217ENST00000491860 CYSTM1Q9H1C7 97 aa3.21□□□□□ -1.9
NUP50-217ENST00000491860 KRTAP12-1P59990 96 aa3.19□□□□□ -1.9
NUP50-217ENST00000491860 LCE4AQ5TA78 99 aa3.19□□□□□ -1.9
NUP50-217ENST00000491860 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
NUP50-217ENST00000491860 A0A1B0GU69 56 aa3.18□□□□□ -1.9
NUP50-217ENST00000491860 KRTAP19-5Q3LI72 72 aa3.17□□□□□ -1.9
NUP50-217ENST00000491860 H7BZZ5 65 aa3.16□□□□□ -1.9
NUP50-217ENST00000491860 TNP1P09430 55 aa3.14□□□□□ -1.91
NUP50-217ENST00000491860 MT4P47944 62 aa3.13□□□□□ -1.91
NUP50-217ENST00000491860 KRTAP5-7Q6L8G8 165 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms