RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 CXCL6P80162 114 aa3.98□□□□□ -1.77
HDAC3-211ENST00000491581 KRTAP19-8Q3LI54 63 aa3.96□□□□□ -1.78
HDAC3-211ENST00000491581 Q5VV11 94 aa3.95□□□□□ -1.78
HDAC3-211ENST00000491581 SPRR2GQ9BYE4 73 aa3.95□□□□□ -1.78
HDAC3-211ENST00000491581 NEBP20929 6669 aa3.94□□□□□ -1.78
HDAC3-211ENST00000491581 K7EP34 96 aa3.93□□□□□ -1.78
HDAC3-211ENST00000491581 KRTAP10-5P60370 271 aa3.93□□□□□ -1.78
HDAC3-211ENST00000491581 UBL5Q9BZL1 73 aa3.93□□□□□ -1.78
HDAC3-211ENST00000491581 MUC12Q9UKN1 5478 aa3.92□□□□□ -1.78
HDAC3-211ENST00000491581 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
HDAC3-211ENST00000491581 KLKP1Q107X0 134 aa3.9□□□□□ -1.79
HDAC3-211ENST00000491581 COL5A1-AS1Q5SY13 56 aa3.89□□□□□ -1.79
HDAC3-211ENST00000491581 ETDBQ3ZM63 59 aa3.88□□□□□ -1.79
HDAC3-211ENST00000491581 CYP4F30PQ9H0H9 118 aa3.88□□□□□ -1.79
HDAC3-211ENST00000491581 PCP4L1A6NKN8 68 aa3.85□□□□□ -1.79
HDAC3-211ENST00000491581 TP53AIP1Q9HCN2 124 aa3.84□□□□□ -1.79
HDAC3-211ENST00000491581 KMT2DO14686 5537 aa3.83□□□□□ -1.8
HDAC3-211ENST00000491581 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
HDAC3-211ENST00000491581 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
HDAC3-211ENST00000491581 IMUPQ9GZP8 106 aa3.82□□□□□ -1.8
HDAC3-211ENST00000491581 TRAV22A0A0B4J277 110 aa3.81□□□□□ -1.8
HDAC3-211ENST00000491581 F8W1H4 67 aa3.79□□□□□ -1.8
HDAC3-211ENST00000491581 GTF2H5Q6ZYL4 71 aa3.79□□□□□ -1.8
HDAC3-211ENST00000491581 H0Y9P7 68 aa3.78□□□□□ -1.8
HDAC3-211ENST00000491581 HIST1H4AP62805 103 aaKnown RBP3.78□□□□□ -1.8
HDAC3-211ENST00000491581 ADM2Q7Z4H4 148 aa3.78□□□□□ -1.8
HDAC3-211ENST00000491581 LOC101927531A0A1B0GV80 90 aa3.77□□□□□ -1.81
HDAC3-211ENST00000491581 MT1XP80297 61 aa3.77□□□□□ -1.81
HDAC3-211ENST00000491581 MDN1Q9NU22 5596 aa3.75□□□□□ -1.81
HDAC3-211ENST00000491581 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
HDAC3-211ENST00000491581 SPRR2FQ96RM1 72 aa3.74□□□□□ -1.81
HDAC3-211ENST00000491581 CRIPTQ9P021 101 aa3.74□□□□□ -1.81
HDAC3-211ENST00000491581 NDUFC1O43677 76 aa3.73□□□□□ -1.81
HDAC3-211ENST00000491581 P0C880 135 aa3.73□□□□□ -1.81
HDAC3-211ENST00000491581 LINC00208Q96KT6 92 aa3.72□□□□□ -1.81
HDAC3-211ENST00000491581 A8MUN3 132 aa3.71□□□□□ -1.82
HDAC3-211ENST00000491581 UQCRQO14949 82 aa3.71□□□□□ -1.82
HDAC3-211ENST00000491581 SPRR2EP22531 72 aa3.71□□□□□ -1.82
HDAC3-211ENST00000491581 SPRR2BP35325 72 aa3.71□□□□□ -1.82
HDAC3-211ENST00000491581 SPRR2AP35326 72 aa3.71□□□□□ -1.82
HDAC3-211ENST00000491581 H0YAA0 97 aa3.7□□□□□ -1.82
HDAC3-211ENST00000491581 ACYP1P07311 99 aa3.68□□□□□ -1.82
HDAC3-211ENST00000491581 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
HDAC3-211ENST00000491581 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
HDAC3-211ENST00000491581 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
HDAC3-211ENST00000491581 FAM240AA0A1B0GVK7 77 aa3.66□□□□□ -1.82
HDAC3-211ENST00000491581 ATOX1O00244 68 aa3.66□□□□□ -1.82
HDAC3-211ENST00000491581 ATP5EP2Q5VTU8 51 aa3.66□□□□□ -1.82
HDAC3-211ENST00000491581 KRTAP8-1Q8IUC2 63 aa3.66□□□□□ -1.82
HDAC3-211ENST00000491581 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
HDAC3-211ENST00000491581 M0QZ58 72 aa3.64□□□□□ -1.83
HDAC3-211ENST00000491581 KRTAP10-7P60409 375 aaPredicted RBP3.64□□□□□ -1.83
HDAC3-211ENST00000491581 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
HDAC3-211ENST00000491581 PLAC4Q8WY50 150 aa3.63□□□□□ -1.83
HDAC3-211ENST00000491581 A0A1B0GV90 55 aa3.62□□□□□ -1.83
HDAC3-211ENST00000491581 KRTAP15-1Q3LI76 137 aa3.62□□□□□ -1.83
HDAC3-211ENST00000491581 LINC00643Q86TS7 51 aa3.62□□□□□ -1.83
HDAC3-211ENST00000491581 PRO2289Q9P1D8 64 aa3.62□□□□□ -1.83
HDAC3-211ENST00000491581 R4GN34 69 aa3.62□□□□□ -1.83
HDAC3-211ENST00000491581 MP68P56378 58 aa3.59□□□□□ -1.83
HDAC3-211ENST00000491581 KRTAP12-2P59991 146 aa3.59□□□□□ -1.83
HDAC3-211ENST00000491581 SPRR2DP22532 72 aa3.58□□□□□ -1.84
HDAC3-211ENST00000491581 KRTAP5-11Q6L8G4 156 aa3.57□□□□□ -1.84
HDAC3-211ENST00000491581 DMAC1Q96GE9 116 aa3.57□□□□□ -1.84
HDAC3-211ENST00000491581 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
HDAC3-211ENST00000491581 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
HDAC3-211ENST00000491581 KRTAP10-12P60413 245 aa3.53□□□□□ -1.84
HDAC3-211ENST00000491581 SCGB1A1P11684 91 aa3.49□□□□□ -1.85
HDAC3-211ENST00000491581 C20orf197Q8N268 126 aa3.49□□□□□ -1.85
HDAC3-211ENST00000491581 H3BPC8 53 aa3.47□□□□□ -1.85
HDAC3-211ENST00000491581 KRTAP13-4Q3LI77 160 aa3.47□□□□□ -1.85
HDAC3-211ENST00000491581 MT-ATP8P03928 68 aa3.45□□□□□ -1.86
HDAC3-211ENST00000491581 TRAV7A0A075B6U4 112 aa3.44□□□□□ -1.86
HDAC3-211ENST00000491581 SNURFQ9Y675 71 aa3.43□□□□□ -1.86
HDAC3-211ENST00000491581 ACYP2P14621 99 aa3.42□□□□□ -1.86
HDAC3-211ENST00000491581 CHKB-CPT1BH3BT56 60 aa3.38□□□□□ -1.87
HDAC3-211ENST00000491581 KRTAP19-7Q3SYF9 63 aa3.38□□□□□ -1.87
HDAC3-211ENST00000491581 J3QR89 54 aa3.37□□□□□ -1.87
HDAC3-211ENST00000491581 MT1EP04732 61 aa3.33□□□□□ -1.88
HDAC3-211ENST00000491581 SPTSSBQ8NFR3 76 aa3.33□□□□□ -1.88
HDAC3-211ENST00000491581 DSTQ03001 7570 aaKnown RBP3.33□□□□□ -1.88
HDAC3-211ENST00000491581 A0A0D9SG42 100 aa3.32□□□□□ -1.88
HDAC3-211ENST00000491581 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
HDAC3-211ENST00000491581 SPATA8Q6RVD6 105 aa3.3□□□□□ -1.88
HDAC3-211ENST00000491581 KRTAP19-3Q7Z4W3 81 aa3.29□□□□□ -1.88
HDAC3-211ENST00000491581 KRTAP19-5Q3LI72 72 aa3.27□□□□□ -1.89
HDAC3-211ENST00000491581 SMIM20Q8N5G0 67 aa3.27□□□□□ -1.89
HDAC3-211ENST00000491581 COA5Q86WW8 74 aa3.26□□□□□ -1.89
HDAC3-211ENST00000491581 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
HDAC3-211ENST00000491581 K7ERU9 68 aa3.24□□□□□ -1.89
HDAC3-211ENST00000491581 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
HDAC3-211ENST00000491581 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
HDAC3-211ENST00000491581 CYSTM1Q9H1C7 97 aa3.24□□□□□ -1.89
HDAC3-211ENST00000491581 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
HDAC3-211ENST00000491581 KRTAP23-1A1A580 65 aa3.22□□□□□ -1.89
HDAC3-211ENST00000491581 KRTAP12-1P59990 96 aa3.22□□□□□ -1.89
HDAC3-211ENST00000491581 SERP2Q8N6R1 65 aa3.22□□□□□ -1.89
HDAC3-211ENST00000491581 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
HDAC3-211ENST00000491581 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
HDAC3-211ENST00000491581 MT4P47944 62 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms