RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 PDE6GP18545 87 aa5.35□□□□□ -1.55
EXOSC3-207ENST00000490516 A0A087WVE0 104 aa5.34□□□□□ -1.55
EXOSC3-207ENST00000490516 SCGB1A1P11684 91 aa5.34□□□□□ -1.55
EXOSC3-207ENST00000490516 PSMB2P49721 201 aa5.34□□□□□ -1.55
EXOSC3-207ENST00000490516 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
EXOSC3-207ENST00000490516 SPRR5A0A1B0GTR4 108 aa5.33□□□□□ -1.56
EXOSC3-207ENST00000490516 M0R143 59 aa5.33□□□□□ -1.56
EXOSC3-207ENST00000490516 LCE4AQ5TA78 99 aa5.33□□□□□ -1.56
EXOSC3-207ENST00000490516 HCG22E2RYF7 251 aa5.32□□□□□ -1.56
EXOSC3-207ENST00000490516 HIST3H2BBQ8N257 126 aa5.31□□□□□ -1.56
EXOSC3-207ENST00000490516 HIGD1BQ9P298 99 aa5.3□□□□□ -1.56
EXOSC3-207ENST00000490516 FXYD2P54710 66 aa5.29□□□□□ -1.56
EXOSC3-207ENST00000490516 NREPQ16612 68 aa5.29□□□□□ -1.56
EXOSC3-207ENST00000490516 A0A1B0GW54 56 aa5.28□□□□□ -1.56
EXOSC3-207ENST00000490516 COX6CP09669 75 aa5.28□□□□□ -1.56
EXOSC3-207ENST00000490516 H0YAA0 97 aa5.27□□□□□ -1.57
EXOSC3-207ENST00000490516 KRTAP5-3Q6L8H2 238 aa5.26□□□□□ -1.57
EXOSC3-207ENST00000490516 K7ERJ3 54 aa5.25□□□□□ -1.57
EXOSC3-207ENST00000490516 K7ERU9 68 aa5.25□□□□□ -1.57
EXOSC3-207ENST00000490516 BAALC-AS2P0C853 105 aa5.25□□□□□ -1.57
EXOSC3-207ENST00000490516 CXCL6P80162 114 aa5.25□□□□□ -1.57
EXOSC3-207ENST00000490516 ADM2Q7Z4H4 148 aa5.25□□□□□ -1.57
EXOSC3-207ENST00000490516 LOC110117498A0A087WWA1 95 aa5.24□□□□□ -1.57
EXOSC3-207ENST00000490516 COL5A1-AS1Q5SY13 56 aa5.24□□□□□ -1.57
EXOSC3-207ENST00000490516 CASC2Q6XLA1 102 aa5.24□□□□□ -1.57
EXOSC3-207ENST00000490516 HIST1H2BLQ99880 126 aa5.24□□□□□ -1.57
EXOSC3-207ENST00000490516 PYY3Q5JQD4 70 aa5.23□□□□□ -1.57
EXOSC3-207ENST00000490516 KRTAP19-3Q7Z4W3 81 aa5.21□□□□□ -1.58
EXOSC3-207ENST00000490516 KRTAP9-9Q9BYP9 154 aa5.19□□□□□ -1.58
EXOSC3-207ENST00000490516 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
EXOSC3-207ENST00000490516 C14orf132Q9NPU4 83 aa5.18□□□□□ -1.58
EXOSC3-207ENST00000490516 Q8N9L7 120 aa5.17□□□□□ -1.58
EXOSC3-207ENST00000490516 CYSTM1Q9H1C7 97 aa5.17□□□□□ -1.58
EXOSC3-207ENST00000490516 JMJD7-PLA2G4BH0Y9G9 81 aa5.16□□□□□ -1.58
EXOSC3-207ENST00000490516 R4GN34 69 aa5.15□□□□□ -1.59
EXOSC3-207ENST00000490516 SCGB1C2P0DMR2 95 aa5.14□□□□□ -1.59
EXOSC3-207ENST00000490516 BPY2O14599 106 aa5.13□□□□□ -1.59
EXOSC3-207ENST00000490516 NDUFC1O43677 76 aa5.13□□□□□ -1.59
EXOSC3-207ENST00000490516 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
EXOSC3-207ENST00000490516 PAM16Q9Y3D7 125 aa5.13□□□□□ -1.59
EXOSC3-207ENST00000490516 MT1EP04732 61 aa5.12□□□□□ -1.59
EXOSC3-207ENST00000490516 SPATA45Q537H7 98 aa5.12□□□□□ -1.59
EXOSC3-207ENST00000490516 KRTAP5-4Q6L8H1 288 aa5.12□□□□□ -1.59
EXOSC3-207ENST00000490516 M0QZ58 72 aa5.1□□□□□ -1.59
EXOSC3-207ENST00000490516 LINC01554Q52M75 96 aa5.1□□□□□ -1.59
EXOSC3-207ENST00000490516 J3QR89 54 aa5.09□□□□□ -1.59
EXOSC3-207ENST00000490516 P0C880 135 aa5.05□□□□□ -1.6
EXOSC3-207ENST00000490516 UQCR10Q9UDW1 63 aa5.05□□□□□ -1.6
EXOSC3-207ENST00000490516 GTF2H5Q6ZYL4 71 aa5.04□□□□□ -1.6
EXOSC3-207ENST00000490516 KRTAP23-1A1A580 65 aa5.03□□□□□ -1.6
EXOSC3-207ENST00000490516 K7EP34 96 aa5.02□□□□□ -1.61
EXOSC3-207ENST00000490516 HSD52Q0P140 79 aa5.02□□□□□ -1.61
EXOSC3-207ENST00000490516 VAMP8Q9BV40 100 aa5.02□□□□□ -1.61
EXOSC3-207ENST00000490516 ATXN8Q156A1 80 aa5.01□□□□□ -1.61
EXOSC3-207ENST00000490516 CYP4F30PQ9H0H9 118 aa5.01□□□□□ -1.61
EXOSC3-207ENST00000490516 MT1GP13640 62 aa4.99□□□□□ -1.61
EXOSC3-207ENST00000490516 BATFQ16520 125 aa4.99□□□□□ -1.61
EXOSC3-207ENST00000490516 PP632Q6XCG6 107 aa4.93□□□□□ -1.62
EXOSC3-207ENST00000490516 C20orf197Q8N268 126 aa4.93□□□□□ -1.62
EXOSC3-207ENST00000490516 MT1MQ8N339 61 aa4.93□□□□□ -1.62
EXOSC3-207ENST00000490516 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
EXOSC3-207ENST00000490516 SMIM20Q8N5G0 67 aa4.9□□□□□ -1.63
EXOSC3-207ENST00000490516 KRTAP4-3Q9BYR4 195 aa4.9□□□□□ -1.63
EXOSC3-207ENST00000490516 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
EXOSC3-207ENST00000490516 ANAPC13Q9BS18 74 aa4.89□□□□□ -1.63
EXOSC3-207ENST00000490516 NAA38Q9BRA0 125 aaKnown RBP4.88□□□□□ -1.63
EXOSC3-207ENST00000490516 F8W1H4 67 aa4.87□□□□□ -1.63
EXOSC3-207ENST00000490516 TAX1BP3O14907 124 aa4.87□□□□□ -1.63
EXOSC3-207ENST00000490516 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
EXOSC3-207ENST00000490516 ACYP1P07311 99 aa4.85□□□□□ -1.63
EXOSC3-207ENST00000490516 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
EXOSC3-207ENST00000490516 SEC61GP60059 68 aa4.83□□□□□ -1.64
EXOSC3-207ENST00000490516 TRAV22A0A0B4J277 110 aa4.81□□□□□ -1.64
EXOSC3-207ENST00000490516 LOC101927531A0A1B0GV80 90 aa4.81□□□□□ -1.64
EXOSC3-207ENST00000490516 KRTAP19-5Q3LI72 72 aa4.81□□□□□ -1.64
EXOSC3-207ENST00000490516 AHNAKQ09666 5890 aaKnown RBP4.8□□□□□ -1.64
EXOSC3-207ENST00000490516 MT-ATP8P03928 68 aa4.79□□□□□ -1.64
EXOSC3-207ENST00000490516 SPCS1Q9Y6A9 102 aa4.79□□□□□ -1.64
EXOSC3-207ENST00000490516 V9GYY9 64 aa4.79□□□□□ -1.64
EXOSC3-207ENST00000490516 A0A1W2PPM0 123 aa4.78□□□□□ -1.64
EXOSC3-207ENST00000490516 MT1LQ93083 61 aa4.77□□□□□ -1.65
EXOSC3-207ENST00000490516 PRO0628Q9UI54 55 aa4.76□□□□□ -1.65
EXOSC3-207ENST00000490516 MUC5ACP98088 5654 aa4.74□□□□□ -1.65
EXOSC3-207ENST00000490516 UQCRQO14949 82 aa4.68□□□□□ -1.66
EXOSC3-207ENST00000490516 KRTAP4-11Q9BYQ6 195 aa4.68□□□□□ -1.66
EXOSC3-207ENST00000490516 UBL5Q9BZL1 73 aa4.68□□□□□ -1.66
EXOSC3-207ENST00000490516 H3BT86 120 aa4.67□□□□□ -1.66
EXOSC3-207ENST00000490516 TMEM258P61165 79 aa4.66□□□□□ -1.66
EXOSC3-207ENST00000490516 CCDC179H3BU77 68 aa4.65□□□□□ -1.67
EXOSC3-207ENST00000490516 ETDBQ3ZM63 59 aa4.65□□□□□ -1.67
EXOSC3-207ENST00000490516 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
EXOSC3-207ENST00000490516 A0A0D9SG42 100 aa4.64□□□□□ -1.67
EXOSC3-207ENST00000490516 KRTAP4-2Q9BYR5 136 aa4.63□□□□□ -1.67
EXOSC3-207ENST00000490516 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
EXOSC3-207ENST00000490516 CAMK2N1Q7Z7J9 78 aa4.62□□□□□ -1.67
EXOSC3-207ENST00000490516 KRTAP15-1Q3LI76 137 aa4.61□□□□□ -1.67
EXOSC3-207ENST00000490516 PRO0461Q9UI25 63 aa4.61□□□□□ -1.67
EXOSC3-207ENST00000490516 FAM240AA0A1B0GVK7 77 aa4.6□□□□□ -1.67
EXOSC3-207ENST00000490516 H0Y9P7 68 aa4.59□□□□□ -1.67
EXOSC3-207ENST00000490516 KRTAP5-5Q701N2 237 aaPredicted RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms