RNA–Protein interactions for RNA: ENST00000490283.1

SEC13-218, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-218ENST00000490283 Q5VV11 94 aa7.88□□□□□ -1.15
SEC13-218ENST00000490283 SPRR2GQ9BYE4 73 aa7.86□□□□□ -1.15
SEC13-218ENST00000490283 SYNE2Q8WXH0 6885 aaKnown RBP7.85□□□□□ -1.15
SEC13-218ENST00000490283 A0A1B0GV90 55 aa7.84□□□□□ -1.15
SEC13-218ENST00000490283 NDUFC1O43677 76 aa7.84□□□□□ -1.15
SEC13-218ENST00000490283 A8MUN3 132 aa7.83□□□□□ -1.16
SEC13-218ENST00000490283 MP68P56378 58 aa7.83□□□□□ -1.16
SEC13-218ENST00000490283 LINC00208Q96KT6 92 aa7.83□□□□□ -1.16
SEC13-218ENST00000490283 IMUPQ9GZP8 106 aa7.83□□□□□ -1.16
SEC13-218ENST00000490283 CRIPTQ9P021 101 aa7.81□□□□□ -1.16
SEC13-218ENST00000490283 A6NN06 94 aa7.8□□□□□ -1.16
SEC13-218ENST00000490283 J3QR89 54 aa7.8□□□□□ -1.16
SEC13-218ENST00000490283 KRTAP19-8Q3LI54 63 aa7.8□□□□□ -1.16
SEC13-218ENST00000490283 MT1BP07438 61 aa7.79□□□□□ -1.16
SEC13-218ENST00000490283 OCR1Q9BZK8 76 aa7.76□□□□□ -1.17
SEC13-218ENST00000490283 H0YAA0 97 aa7.73□□□□□ -1.17
SEC13-218ENST00000490283 KRTAP6-3Q3LI67 103 aa7.71□□□□□ -1.18
SEC13-218ENST00000490283 SCGB1A1P11684 91 aa7.7□□□□□ -1.18
SEC13-218ENST00000490283 H3BPC8 53 aa7.69□□□□□ -1.18
SEC13-218ENST00000490283 ADM2Q7Z4H4 148 aa7.66□□□□□ -1.18
SEC13-218ENST00000490283 KRTAP10-5P60370 271 aa7.64□□□□□ -1.19
SEC13-218ENST00000490283 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
SEC13-218ENST00000490283 DMAC1Q96GE9 116 aa7.56□□□□□ -1.2
SEC13-218ENST00000490283 H3BS24 57 aa7.51□□□□□ -1.21
SEC13-218ENST00000490283 R4GN34 69 aa7.51□□□□□ -1.21
SEC13-218ENST00000490283 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
SEC13-218ENST00000490283 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
SEC13-218ENST00000490283 K7ERU9 68 aa7.47□□□□□ -1.21
SEC13-218ENST00000490283 SMIM20Q8N5G0 67 aa7.47□□□□□ -1.21
SEC13-218ENST00000490283 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
SEC13-218ENST00000490283 PRO2289Q9P1D8 64 aa7.46□□□□□ -1.22
SEC13-218ENST00000490283 TRAV7A0A075B6U4 112 aa7.43□□□□□ -1.22
SEC13-218ENST00000490283 MT-ATP8P03928 68 aa7.43□□□□□ -1.22
SEC13-218ENST00000490283 P0C880 135 aa7.43□□□□□ -1.22
SEC13-218ENST00000490283 M0QZ58 72 aa7.42□□□□□ -1.22
SEC13-218ENST00000490283 ACYP2P14621 99 aa7.42□□□□□ -1.22
SEC13-218ENST00000490283 NEBP20929 6669 aa7.41□□□□□ -1.22
SEC13-218ENST00000490283 SPTSSBQ8NFR3 76 aa7.39□□□□□ -1.23
SEC13-218ENST00000490283 CHKB-CPT1BH3BT56 60 aa7.33□□□□□ -1.24
SEC13-218ENST00000490283 KRTAP5-9P26371 169 aa7.33□□□□□ -1.24
SEC13-218ENST00000490283 LINC01554Q52M75 96 aa7.33□□□□□ -1.24
SEC13-218ENST00000490283 MUC12Q9UKN1 5478 aa7.31□□□□□ -1.24
SEC13-218ENST00000490283 MT1XP80297 61 aa7.31□□□□□ -1.24
SEC13-218ENST00000490283 SNURFQ9Y675 71 aa7.26□□□□□ -1.25
SEC13-218ENST00000490283 KMT2DO14686 5537 aa7.2□□□□□ -1.26
SEC13-218ENST00000490283 SPANXA2-OT1Q8N9U9 137 aa7.19□□□□□ -1.26
SEC13-218ENST00000490283 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
SEC13-218ENST00000490283 SERP2Q8N6R1 65 aa7.17□□□□□ -1.26
SEC13-218ENST00000490283 KRTAP20-1Q3LI63 56 aa7.16□□□□□ -1.26
SEC13-218ENST00000490283 SPRR2FQ96RM1 72 aa7.16□□□□□ -1.26
SEC13-218ENST00000490283 MDN1Q9NU22 5596 aa7.15□□□□□ -1.26
SEC13-218ENST00000490283 KRTAP8-1Q8IUC2 63 aa7.15□□□□□ -1.26
SEC13-218ENST00000490283 SPRR2EP22531 72 aa7.06□□□□□ -1.28
SEC13-218ENST00000490283 SPRR2BP35325 72 aa7.06□□□□□ -1.28
SEC13-218ENST00000490283 SPRR2AP35326 72 aa7.06□□□□□ -1.28
SEC13-218ENST00000490283 KRTAP4-8Q9BYQ9 185 aa7.02□□□□□ -1.29
SEC13-218ENST00000490283 COA5Q86WW8 74 aa6.99□□□□□ -1.29
SEC13-218ENST00000490283 KRTAP10-7P60409 375 aaPredicted RBP6.98□□□□□ -1.29
SEC13-218ENST00000490283 KRTAP4-8A0A0G2JLE6 195 aa6.97□□□□□ -1.29
SEC13-218ENST00000490283 KRTAP2-3P0C7H8 128 aa6.97□□□□□ -1.29
SEC13-218ENST00000490283 KRTAP2-4Q9BYR9 128 aa6.97□□□□□ -1.29
SEC13-218ENST00000490283 SEC61GP60059 68 aa6.96□□□□□ -1.3
SEC13-218ENST00000490283 KRTAP10-12P60413 245 aa6.95□□□□□ -1.3
SEC13-218ENST00000490283 COX7CP15954 63 aa6.94□□□□□ -1.3
SEC13-218ENST00000490283 SERP1Q9Y6X1 66 aa6.93□□□□□ -1.3
SEC13-218ENST00000490283 KRTAP13-4Q3LI77 160 aa6.92□□□□□ -1.3
SEC13-218ENST00000490283 LCE1AQ5T7P2 110 aa6.92□□□□□ -1.3
SEC13-218ENST00000490283 CAMK2N1Q7Z7J9 78 aa6.92□□□□□ -1.3
SEC13-218ENST00000490283 KRTAP4-12Q9BQ66 201 aa6.89□□□□□ -1.31
SEC13-218ENST00000490283 SPRR2DP22532 72 aa6.83□□□□□ -1.32
SEC13-218ENST00000490283 H7BZZ5 65 aa6.81□□□□□ -1.32
SEC13-218ENST00000490283 A0A0D9SG42 100 aa6.79□□□□□ -1.32
SEC13-218ENST00000490283 A0A1B0GU33 70 aa6.77□□□□□ -1.33
SEC13-218ENST00000490283 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
SEC13-218ENST00000490283 SPATA8Q6RVD6 105 aa6.74□□□□□ -1.33
SEC13-218ENST00000490283 KRTAP2-2Q9BYT5 123 aa6.74□□□□□ -1.33
SEC13-218ENST00000490283 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
SEC13-218ENST00000490283 SPINT4Q6UDR6 99 aa6.72□□□□□ -1.33
SEC13-218ENST00000490283 ANAPC13Q9BS18 74 aa6.71□□□□□ -1.34
SEC13-218ENST00000490283 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
SEC13-218ENST00000490283 KRTAP19-4Q3LI73 84 aa6.69□□□□□ -1.34
SEC13-218ENST00000490283 A0A1B0GU69 56 aa6.67□□□□□ -1.34
SEC13-218ENST00000490283 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
SEC13-218ENST00000490283 KRTAP12-1P59990 96 aa6.6□□□□□ -1.35
SEC13-218ENST00000490283 KRTAP9-9Q9BYP9 154 aa6.55□□□□□ -1.36
SEC13-218ENST00000490283 KRTAP9-4Q9BYQ2 154 aa6.55□□□□□ -1.36
SEC13-218ENST00000490283 ATP5EP56381 51 aaPredicted RBP6.54□□□□□ -1.36
SEC13-218ENST00000490283 CCDC179H3BU77 68 aa6.52□□□□□ -1.37
SEC13-218ENST00000490283 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
SEC13-218ENST00000490283 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
SEC13-218ENST00000490283 PRR15LQ9BU68 103 aa6.51□□□□□ -1.37
SEC13-218ENST00000490283 MT1EP04732 61 aa6.49□□□□□ -1.37
SEC13-218ENST00000490283 A8MU10 97 aa6.48□□□□□ -1.37
SEC13-218ENST00000490283 KRTAP19-3Q7Z4W3 81 aa6.46□□□□□ -1.38
SEC13-218ENST00000490283 LCE5AQ5TCM9 118 aa6.45□□□□□ -1.38
SEC13-218ENST00000490283 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
SEC13-218ENST00000490283 TNP1P09430 55 aa6.36□□□□□ -1.39
SEC13-218ENST00000490283 LINC01558Q9Y6Z2 57 aa6.36□□□□□ -1.39
SEC13-218ENST00000490283 DSTQ03001 7570 aaKnown RBP6.34□□□□□ -1.39
SEC13-218ENST00000490283 TMEM258P61165 79 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms