RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 CRIPTQ9P021 101 aa8.44□□□□□ -1.06
TNFRSF1B-202ENST00000489921 KMT2DO14686 5537 aa8.42□□□□□ -1.06
TNFRSF1B-202ENST00000489921 LOC101927531A0A1B0GV80 90 aa8.42□□□□□ -1.06
TNFRSF1B-202ENST00000489921 MDN1Q9NU22 5596 aa8.39□□□□□ -1.07
TNFRSF1B-202ENST00000489921 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
TNFRSF1B-202ENST00000489921 H0YAA0 97 aa8.34□□□□□ -1.07
TNFRSF1B-202ENST00000489921 UQCRQO14949 82 aa8.3□□□□□ -1.08
TNFRSF1B-202ENST00000489921 ACYP1P07311 99 aa8.3□□□□□ -1.08
TNFRSF1B-202ENST00000489921 KRTAP20-1Q3LI63 56 aa8.3□□□□□ -1.08
TNFRSF1B-202ENST00000489921 H0Y9P7 68 aa8.29□□□□□ -1.08
TNFRSF1B-202ENST00000489921 NDUFC1O43677 76 aa8.29□□□□□ -1.08
TNFRSF1B-202ENST00000489921 FAM240AA0A1B0GVK7 77 aa8.26□□□□□ -1.09
TNFRSF1B-202ENST00000489921 PCP4L1A6NKN8 68 aa8.26□□□□□ -1.09
TNFRSF1B-202ENST00000489921 HIST1H4AP62805 103 aaKnown RBP8.26□□□□□ -1.09
TNFRSF1B-202ENST00000489921 ATP5EP2Q5VTU8 51 aa8.26□□□□□ -1.09
TNFRSF1B-202ENST00000489921 ATOX1O00244 68 aa8.25□□□□□ -1.09
TNFRSF1B-202ENST00000489921 ADM2Q7Z4H4 148 aa8.22□□□□□ -1.09
TNFRSF1B-202ENST00000489921 A8MUN3 132 aa8.19□□□□□ -1.1
TNFRSF1B-202ENST00000489921 MT1XP80297 61 aa8.19□□□□□ -1.1
TNFRSF1B-202ENST00000489921 LINC00208Q96KT6 92 aa8.15□□□□□ -1.1
TNFRSF1B-202ENST00000489921 LINC00643Q86TS7 51 aa8.1□□□□□ -1.11
TNFRSF1B-202ENST00000489921 OCR1Q9BZK8 76 aa8.1□□□□□ -1.11
TNFRSF1B-202ENST00000489921 SPRR2FQ96RM1 72 aa8.09□□□□□ -1.11
TNFRSF1B-202ENST00000489921 PRO2289Q9P1D8 64 aa8.09□□□□□ -1.11
TNFRSF1B-202ENST00000489921 P0C880 135 aa8.06□□□□□ -1.12
TNFRSF1B-202ENST00000489921 KRTAP2-3P0C7H8 128 aa8.05□□□□□ -1.12
TNFRSF1B-202ENST00000489921 KRTAP2-4Q9BYR9 128 aa8.05□□□□□ -1.12
TNFRSF1B-202ENST00000489921 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
TNFRSF1B-202ENST00000489921 SPRR2EP22531 72 aa8.01□□□□□ -1.13
TNFRSF1B-202ENST00000489921 SPRR2BP35325 72 aa8.01□□□□□ -1.13
TNFRSF1B-202ENST00000489921 SPRR2AP35326 72 aa8.01□□□□□ -1.13
TNFRSF1B-202ENST00000489921 MP68P56378 58 aa8.01□□□□□ -1.13
TNFRSF1B-202ENST00000489921 KRTAP12-2P59991 146 aa8□□□□□ -1.13
TNFRSF1B-202ENST00000489921 KRTAP3-2Q9BYR7 98 aa8□□□□□ -1.13
TNFRSF1B-202ENST00000489921 R4GN34 69 aa8□□□□□ -1.13
TNFRSF1B-202ENST00000489921 KRTAP8-1Q8IUC2 63 aa7.98□□□□□ -1.13
TNFRSF1B-202ENST00000489921 M0QZ58 72 aa7.94□□□□□ -1.14
TNFRSF1B-202ENST00000489921 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
TNFRSF1B-202ENST00000489921 DMAC1Q96GE9 116 aa7.94□□□□□ -1.14
TNFRSF1B-202ENST00000489921 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
TNFRSF1B-202ENST00000489921 KRTAP4-8Q9BYQ9 185 aa7.92□□□□□ -1.14
TNFRSF1B-202ENST00000489921 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
TNFRSF1B-202ENST00000489921 H3BPC8 53 aa7.9□□□□□ -1.14
TNFRSF1B-202ENST00000489921 A0A1B0GV90 55 aa7.83□□□□□ -1.16
TNFRSF1B-202ENST00000489921 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
TNFRSF1B-202ENST00000489921 LINC01554Q52M75 96 aa7.82□□□□□ -1.16
TNFRSF1B-202ENST00000489921 KRTAP2-2Q9BYT5 123 aa7.79□□□□□ -1.16
TNFRSF1B-202ENST00000489921 KRTAP2-1Q9BYU5 128 aa7.79□□□□□ -1.16
TNFRSF1B-202ENST00000489921 KRTAP10-12P60413 245 aa7.77□□□□□ -1.17
TNFRSF1B-202ENST00000489921 TRAV7A0A075B6U4 112 aa7.74□□□□□ -1.17
TNFRSF1B-202ENST00000489921 SPRR2DP22532 72 aa7.74□□□□□ -1.17
TNFRSF1B-202ENST00000489921 SCGB1A1P11684 91 aa7.73□□□□□ -1.17
TNFRSF1B-202ENST00000489921 J3QR89 54 aa7.66□□□□□ -1.18
TNFRSF1B-202ENST00000489921 ACYP2P14621 99 aa7.66□□□□□ -1.18
TNFRSF1B-202ENST00000489921 MT-ATP8P03928 68 aa7.59□□□□□ -1.19
TNFRSF1B-202ENST00000489921 LCE3BQ5TA77 95 aa7.56□□□□□ -1.2
TNFRSF1B-202ENST00000489921 SPTSSBQ8NFR3 76 aa7.56□□□□□ -1.2
TNFRSF1B-202ENST00000489921 KRTAP13-4Q3LI77 160 aa7.48□□□□□ -1.21
TNFRSF1B-202ENST00000489921 SMIM20Q8N5G0 67 aa7.48□□□□□ -1.21
TNFRSF1B-202ENST00000489921 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.22
TNFRSF1B-202ENST00000489921 SNURFQ9Y675 71 aa7.42□□□□□ -1.22
TNFRSF1B-202ENST00000489921 SPANXA2-OT1Q8N9U9 137 aa7.35□□□□□ -1.23
TNFRSF1B-202ENST00000489921 KRTAP19-7Q3SYF9 63 aa7.34□□□□□ -1.23
TNFRSF1B-202ENST00000489921 DSTQ03001 7570 aaKnown RBP7.31□□□□□ -1.24
TNFRSF1B-202ENST00000489921 LCE5AQ5TCM9 118 aa7.3□□□□□ -1.24
TNFRSF1B-202ENST00000489921 K7ERU9 68 aa7.29□□□□□ -1.24
TNFRSF1B-202ENST00000489921 CAMK2N1Q7Z7J9 78 aa7.29□□□□□ -1.24
TNFRSF1B-202ENST00000489921 MT1EP04732 61 aa7.25□□□□□ -1.25
TNFRSF1B-202ENST00000489921 KRTAP19-3Q7Z4W3 81 aa7.22□□□□□ -1.25
TNFRSF1B-202ENST00000489921 SERP2Q8N6R1 65 aa7.2□□□□□ -1.26
TNFRSF1B-202ENST00000489921 COA5Q86WW8 74 aa7.16□□□□□ -1.26
TNFRSF1B-202ENST00000489921 A0A0D9SG42 100 aa7.13□□□□□ -1.27
TNFRSF1B-202ENST00000489921 KRTAP4-9Q9BYQ8 210 aa7.12□□□□□ -1.27
TNFRSF1B-202ENST00000489921 SPATA8Q6RVD6 105 aa7.11□□□□□ -1.27
TNFRSF1B-202ENST00000489921 GPR98Q8WXG9 6306 aa7.08□□□□□ -1.28
TNFRSF1B-202ENST00000489921 KRTAP19-5Q3LI72 72 aa7.06□□□□□ -1.28
TNFRSF1B-202ENST00000489921 SERP1Q9Y6X1 66 aa7.05□□□□□ -1.28
TNFRSF1B-202ENST00000489921 KRTAP12-1P59990 96 aa7.04□□□□□ -1.28
TNFRSF1B-202ENST00000489921 SEC61GP60059 68 aa7.03□□□□□ -1.28
TNFRSF1B-202ENST00000489921 MT1GP13640 62 aa7.02□□□□□ -1.29
TNFRSF1B-202ENST00000489921 SPINT4Q6UDR6 99 aa7.02□□□□□ -1.29
TNFRSF1B-202ENST00000489921 CYSTM1Q9H1C7 97 aa7.02□□□□□ -1.29
TNFRSF1B-202ENST00000489921 A0A1B0GU33 70 aa7.01□□□□□ -1.29
TNFRSF1B-202ENST00000489921 LCE1DQ5T752 114 aa6.93□□□□□ -1.3
TNFRSF1B-202ENST00000489921 MT1MQ8N339 61 aa6.92□□□□□ -1.3
TNFRSF1B-202ENST00000489921 COX7CP15954 63 aa6.91□□□□□ -1.3
TNFRSF1B-202ENST00000489921 MT1LQ93083 61 aa6.91□□□□□ -1.3
TNFRSF1B-202ENST00000489921 H7BZZ5 65 aa6.9□□□□□ -1.3
TNFRSF1B-202ENST00000489921 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
TNFRSF1B-202ENST00000489921 HMCN1Q96RW7 5635 aa6.88□□□□□ -1.31
TNFRSF1B-202ENST00000489921 LCE4AQ5TA78 99 aa6.84□□□□□ -1.31
TNFRSF1B-202ENST00000489921 A8MU10 97 aa6.81□□□□□ -1.32
TNFRSF1B-202ENST00000489921 MT4P47944 62 aa6.8□□□□□ -1.32
TNFRSF1B-202ENST00000489921 KRTAP4-3Q9BYR4 195 aa6.8□□□□□ -1.32
TNFRSF1B-202ENST00000489921 LCE3AQ5TA76 89 aa6.79□□□□□ -1.32
TNFRSF1B-202ENST00000489921 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
TNFRSF1B-202ENST00000489921 SMIM26A0A096LP01 95 aa6.77□□□□□ -1.33
TNFRSF1B-202ENST00000489921 A0A1B0GU69 56 aa6.76□□□□□ -1.33
TNFRSF1B-202ENST00000489921 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
TNFRSF1B-202ENST00000489921 TNP1P09430 55 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 182 ms