RNA–Protein interactions for RNA: ENST00000488733.1

ATP1A1-208, Transcript of ATPase Na+/K+ transporting subunit alpha 1, humanhuman

TSL 2

Gene ATP1A1, Length 1,728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A1-208ENST00000488733 RBM12B-AS1Q9P1G2 102 aa10.23□□□□□ -0.77
ATP1A1-208ENST00000488733 Q5VV11 94 aa10.21□□□□□ -0.77
ATP1A1-208ENST00000488733 H1FX-AS1Q4G0G2 97 aa10.17□□□□□ -0.78
ATP1A1-208ENST00000488733 A0A1B0GU69 56 aa10.16□□□□□ -0.78
ATP1A1-208ENST00000488733 KRTAP4-1Q9BYQ7 146 aa10.16□□□□□ -0.78
ATP1A1-208ENST00000488733 S4R3F8 94 aa10.12□□□□□ -0.79
ATP1A1-208ENST00000488733 UBR4Q5T4S7 5183 aa10.1□□□□□ -0.79
ATP1A1-208ENST00000488733 SEC61GP60059 68 aa10.08□□□□□ -0.8
ATP1A1-208ENST00000488733 LCA10Q71F78 164 aa10.08□□□□□ -0.8
ATP1A1-208ENST00000488733 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
ATP1A1-208ENST00000488733 A6NED7 52 aa10.02□□□□□ -0.8
ATP1A1-208ENST00000488733 BRK1Q8WUW1 75 aa10.02□□□□□ -0.8
ATP1A1-208ENST00000488733 MUC2Q02817 5179 aa10.01□□□□□ -0.81
ATP1A1-208ENST00000488733 RNF213Q63HN8 5207 aa9.97□□□□□ -0.81
ATP1A1-208ENST00000488733 PRO0628Q9UI54 55 aa9.91□□□□□ -0.82
ATP1A1-208ENST00000488733 UQCR11O14957 56 aa9.9□□□□□ -0.83
ATP1A1-208ENST00000488733 CSAG1Q6PB30 78 aa9.9□□□□□ -0.83
ATP1A1-208ENST00000488733 CDC42SE1Q9NRR8 79 aa9.87□□□□□ -0.83
ATP1A1-208ENST00000488733 KRTAP19-2Q3LHN2 52 aa9.85□□□□□ -0.83
ATP1A1-208ENST00000488733 A0A1B0GU33 70 aa9.79□□□□□ -0.84
ATP1A1-208ENST00000488733 SPATA8Q6RVD6 105 aa9.79□□□□□ -0.84
ATP1A1-208ENST00000488733 MIR22HGQ0VDD5 57 aa9.78□□□□□ -0.84
ATP1A1-208ENST00000488733 A8MU10 97 aa9.75□□□□□ -0.85
ATP1A1-208ENST00000488733 KRTAP10-6P60371 365 aaPredicted RBP9.73□□□□□ -0.85
ATP1A1-208ENST00000488733 KRTAP3-2Q9BYR7 98 aa9.73□□□□□ -0.85
ATP1A1-208ENST00000488733 H0YAA0 97 aa9.7□□□□□ -0.86
ATP1A1-208ENST00000488733 LCE2CQ5TA81 110 aa9.69□□□□□ -0.86
ATP1A1-208ENST00000488733 ADM2Q7Z4H4 148 aa9.68□□□□□ -0.86
ATP1A1-208ENST00000488733 FAT4Q6V0I7 4981 aa9.65□□□□□ -0.87
ATP1A1-208ENST00000488733 FLGP20930 4061 aaPredicted RBP9.64□□□□□ -0.87
ATP1A1-208ENST00000488733 P0C880 135 aa9.62□□□□□ -0.87
ATP1A1-208ENST00000488733 MT1HP80294 61 aa9.51□□□□□ -0.89
ATP1A1-208ENST00000488733 PMAIP1Q13794 54 aa9.5□□□□□ -0.89
ATP1A1-208ENST00000488733 M0QZ58 72 aa9.48□□□□□ -0.89
ATP1A1-208ENST00000488733 KRTAP13-4Q3LI77 160 aa9.47□□□□□ -0.89
ATP1A1-208ENST00000488733 SVIPQ8NHG7 77 aa9.44□□□□□ -0.9
ATP1A1-208ENST00000488733 M0R2T5 61 aa9.42□□□□□ -0.9
ATP1A1-208ENST00000488733 A6NN06 94 aa9.4□□□□□ -0.9
ATP1A1-208ENST00000488733 K7ERS5 55 aa9.36□□□□□ -0.91
ATP1A1-208ENST00000488733 R4GN34 69 aa9.34□□□□□ -0.91
ATP1A1-208ENST00000488733 A0A0D9SG42 100 aa9.34□□□□□ -0.92
ATP1A1-208ENST00000488733 LORP23490 312 aaPredicted RBP9.25□□□□□ -0.93
ATP1A1-208ENST00000488733 CRIPTQ9P021 101 aa9.25□□□□□ -0.93
ATP1A1-208ENST00000488733 LCE2AQ5TA79 106 aaPredicted RBP9.24□□□□□ -0.93
ATP1A1-208ENST00000488733 KRTAP12-1P59990 96 aa9.16□□□□□ -0.94
ATP1A1-208ENST00000488733 LINC01554Q52M75 96 aa9.15□□□□□ -0.94
ATP1A1-208ENST00000488733 KTN1-AS1Q86SY8 53 aa9.15□□□□□ -0.94
ATP1A1-208ENST00000488733 KRTAP9-8Q9BYQ0 159 aa9.14□□□□□ -0.95
ATP1A1-208ENST00000488733 SPINT4Q6UDR6 99 aa9.13□□□□□ -0.95
ATP1A1-208ENST00000488733 KRTAP12-2P59991 146 aa9.12□□□□□ -0.95
ATP1A1-208ENST00000488733 MT2AP02795 61 aa9.11□□□□□ -0.95
ATP1A1-208ENST00000488733 MT1FP04733 61 aa9.05□□□□□ -0.96
ATP1A1-208ENST00000488733 KRTAP10-10P60014 251 aa9.02□□□□□ -0.96
ATP1A1-208ENST00000488733 ROMO1P60602 79 aa8.96□□□□□ -0.98
ATP1A1-208ENST00000488733 SPRR2GQ9BYE4 73 aa8.96□□□□□ -0.98
ATP1A1-208ENST00000488733 KRTAP19-1Q8IUB9 90 aa8.88□□□□□ -0.99
ATP1A1-208ENST00000488733 PRAC1Q96KF2 57 aa8.82□□□□□ -1
ATP1A1-208ENST00000488733 KRTAP9-3Q9BYQ3 159 aa8.81□□□□□ -1
ATP1A1-208ENST00000488733 CAMK2N1Q7Z7J9 78 aa8.78□□□□□ -1
ATP1A1-208ENST00000488733 LCE2DQ5TA82 110 aaPredicted RBP8.73□□□□□ -1.01
ATP1A1-208ENST00000488733 PLAC4Q8WY50 150 aa8.73□□□□□ -1.01
ATP1A1-208ENST00000488733 KRTAP19-8Q3LI54 63 aa8.69□□□□□ -1.02
ATP1A1-208ENST00000488733 C10orf95Q9H7T3 257 aa8.65□□□□□ -1.03
ATP1A1-208ENST00000488733 KRTAP25-1Q3LHN0 102 aa8.63□□□□□ -1.03
ATP1A1-208ENST00000488733 LCE2BO14633 110 aa8.59□□□□□ -1.03
ATP1A1-208ENST00000488733 MT1BP07438 61 aa8.53□□□□□ -1.04
ATP1A1-208ENST00000488733 USH2AO75445 5202 aa8.44□□□□□ -1.06
ATP1A1-208ENST00000488733 TNP1P09430 55 aa8.4□□□□□ -1.07
ATP1A1-208ENST00000488733 MT1XP80297 61 aa8.29□□□□□ -1.08
ATP1A1-208ENST00000488733 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
ATP1A1-208ENST00000488733 PP632Q6XCG6 107 aa8.27□□□□□ -1.09
ATP1A1-208ENST00000488733 PRO2289Q9P1D8 64 aa8.26□□□□□ -1.09
ATP1A1-208ENST00000488733 FSIP2Q5CZC0 6907 aa8.23□□□□□ -1.09
ATP1A1-208ENST00000488733 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
ATP1A1-208ENST00000488733 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
ATP1A1-208ENST00000488733 SSPOA2VEC9 5147 aa8.2□□□□□ -1.1
ATP1A1-208ENST00000488733 KRTAP19-6Q3LI70 58 aa8.1□□□□□ -1.11
ATP1A1-208ENST00000488733 KRTAP10-7P60409 375 aaPredicted RBP7.95□□□□□ -1.14
ATP1A1-208ENST00000488733 LCE3AQ5TA76 89 aa7.95□□□□□ -1.14
ATP1A1-208ENST00000488733 KRTAP10-12P60413 245 aa7.95□□□□□ -1.14
ATP1A1-208ENST00000488733 CRCT1Q9UGL9 99 aa7.89□□□□□ -1.15
ATP1A1-208ENST00000488733 FCGBPQ9Y6R7 5405 aaPredicted RBP7.87□□□□□ -1.15
ATP1A1-208ENST00000488733 KRTAP8-1Q8IUC2 63 aa7.83□□□□□ -1.16
ATP1A1-208ENST00000488733 KRTAP12-3P60328 96 aa7.66□□□□□ -1.18
ATP1A1-208ENST00000488733 KRTAP15-1Q3LI76 137 aa7.66□□□□□ -1.18
ATP1A1-208ENST00000488733 KMT2DO14686 5537 aa7.63□□□□□ -1.19
ATP1A1-208ENST00000488733 KRTAP9-6A0A140TA67 174 aa7.62□□□□□ -1.19
ATP1A1-208ENST00000488733 KRTAP4-8A0A0G2JLE6 195 aa7.61□□□□□ -1.19
ATP1A1-208ENST00000488733 KRTAP4-8Q9BYQ9 185 aa7.61□□□□□ -1.19
ATP1A1-208ENST00000488733 MACF1Q9UPN3 7388 aaKnown RBP7.54□□□□□ -1.2
ATP1A1-208ENST00000488733 KRTAP19-5Q3LI72 72 aa7.53□□□□□ -1.2
ATP1A1-208ENST00000488733 KRTAP19-7Q3SYF9 63 aa7.39□□□□□ -1.23
ATP1A1-208ENST00000488733 SPRR5A0A1B0GTR4 108 aa7.36□□□□□ -1.23
ATP1A1-208ENST00000488733 SYNE2Q8WXH0 6885 aaKnown RBP7.34□□□□□ -1.23
ATP1A1-208ENST00000488733 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.32□□□□□ -1.24
ATP1A1-208ENST00000488733 MT1EP04732 61 aa7.26□□□□□ -1.25
ATP1A1-208ENST00000488733 KRTAP19-4Q3LI73 84 aa7.24□□□□□ -1.25
ATP1A1-208ENST00000488733 LUZP6Q538Z0 58 aa7.24□□□□□ -1.25
ATP1A1-208ENST00000488733 SPRR2FQ96RM1 72 aa7.2□□□□□ -1.26
ATP1A1-208ENST00000488733 LCE3CQ5T5A8 94 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms