RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 A0A1B0GV90 55 aa8□□□□□ -1.13
ITGB1-215ENST00000488494 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
ITGB1-215ENST00000488494 KLKP1Q107X0 134 aa7.98□□□□□ -1.13
ITGB1-215ENST00000488494 Q5VV11 94 aa7.97□□□□□ -1.13
ITGB1-215ENST00000488494 MT1BP07438 61 aa7.96□□□□□ -1.14
ITGB1-215ENST00000488494 KRTAP19-8Q3LI54 63 aa7.94□□□□□ -1.14
ITGB1-215ENST00000488494 LINC00208Q96KT6 92 aa7.9□□□□□ -1.14
ITGB1-215ENST00000488494 NDUFC1O43677 76 aa7.88□□□□□ -1.15
ITGB1-215ENST00000488494 OCR1Q9BZK8 76 aa7.88□□□□□ -1.15
ITGB1-215ENST00000488494 A6NN06 94 aa7.87□□□□□ -1.15
ITGB1-215ENST00000488494 A8MUN3 132 aa7.86□□□□□ -1.15
ITGB1-215ENST00000488494 IMUPQ9GZP8 106 aa7.86□□□□□ -1.15
ITGB1-215ENST00000488494 MP68P56378 58 aa7.85□□□□□ -1.15
ITGB1-215ENST00000488494 CRIPTQ9P021 101 aa7.84□□□□□ -1.15
ITGB1-215ENST00000488494 LOC100996750A0A140TA64 210 aa7.81□□□□□ -1.16
ITGB1-215ENST00000488494 J3QR89 54 aa7.81□□□□□ -1.16
ITGB1-215ENST00000488494 KRTAP6-3Q3LI67 103 aa7.81□□□□□ -1.16
ITGB1-215ENST00000488494 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
ITGB1-215ENST00000488494 H0YAA0 97 aa7.8□□□□□ -1.16
ITGB1-215ENST00000488494 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
ITGB1-215ENST00000488494 ADM2Q7Z4H4 148 aa7.75□□□□□ -1.17
ITGB1-215ENST00000488494 H3BPC8 53 aa7.72□□□□□ -1.17
ITGB1-215ENST00000488494 SCGB1A1P11684 91 aa7.71□□□□□ -1.18
ITGB1-215ENST00000488494 DMAC1Q96GE9 116 aa7.67□□□□□ -1.18
ITGB1-215ENST00000488494 NEBP20929 6669 aa7.62□□□□□ -1.19
ITGB1-215ENST00000488494 P0C880 135 aa7.58□□□□□ -1.2
ITGB1-215ENST00000488494 MT-ATP8P03928 68 aa7.57□□□□□ -1.2
ITGB1-215ENST00000488494 C20orf197Q8N268 126 aa7.56□□□□□ -1.2
ITGB1-215ENST00000488494 MUC12Q9UKN1 5478 aa7.55□□□□□ -1.2
ITGB1-215ENST00000488494 R4GN34 69 aa7.55□□□□□ -1.2
ITGB1-215ENST00000488494 K7ERU9 68 aa7.51□□□□□ -1.21
ITGB1-215ENST00000488494 M0QZ58 72 aa7.5□□□□□ -1.21
ITGB1-215ENST00000488494 TRAV7A0A075B6U4 112 aa7.49□□□□□ -1.21
ITGB1-215ENST00000488494 SMIM20Q8N5G0 67 aa7.49□□□□□ -1.21
ITGB1-215ENST00000488494 MT1XP80297 61 aa7.48□□□□□ -1.21
ITGB1-215ENST00000488494 PLAC4Q8WY50 150 aa7.48□□□□□ -1.21
ITGB1-215ENST00000488494 PRO2289Q9P1D8 64 aa7.48□□□□□ -1.21
ITGB1-215ENST00000488494 KRTAP5-9P26371 169 aa7.46□□□□□ -1.22
ITGB1-215ENST00000488494 KMT2DO14686 5537 aa7.45□□□□□ -1.22
ITGB1-215ENST00000488494 ACYP2P14621 99 aa7.44□□□□□ -1.22
ITGB1-215ENST00000488494 MDN1Q9NU22 5596 aa7.42□□□□□ -1.22
ITGB1-215ENST00000488494 LINC01554Q52M75 96 aa7.4□□□□□ -1.22
ITGB1-215ENST00000488494 SPTSSBQ8NFR3 76 aa7.37□□□□□ -1.23
ITGB1-215ENST00000488494 SNURFQ9Y675 71 aa7.37□□□□□ -1.23
ITGB1-215ENST00000488494 CHKB-CPT1BH3BT56 60 aa7.35□□□□□ -1.23
ITGB1-215ENST00000488494 KRTAP12-2P59991 146 aa7.27□□□□□ -1.25
ITGB1-215ENST00000488494 SPRR2FQ96RM1 72 aa7.27□□□□□ -1.25
ITGB1-215ENST00000488494 KRTAP20-1Q3LI63 56 aa7.26□□□□□ -1.25
ITGB1-215ENST00000488494 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
ITGB1-215ENST00000488494 SERP2Q8N6R1 65 aa7.24□□□□□ -1.25
ITGB1-215ENST00000488494 SPANXA2-OT1Q8N9U9 137 aa7.24□□□□□ -1.25
ITGB1-215ENST00000488494 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
ITGB1-215ENST00000488494 SPRR2EP22531 72 aa7.17□□□□□ -1.26
ITGB1-215ENST00000488494 SPRR2BP35325 72 aa7.17□□□□□ -1.26
ITGB1-215ENST00000488494 SPRR2AP35326 72 aa7.17□□□□□ -1.26
ITGB1-215ENST00000488494 KRTAP4-8A0A0G2JLE6 195 aa7.13□□□□□ -1.27
ITGB1-215ENST00000488494 KRTAP10-7P60409 375 aaPredicted RBP7.13□□□□□ -1.27
ITGB1-215ENST00000488494 KRTAP13-4Q3LI77 160 aa7.09□□□□□ -1.27
ITGB1-215ENST00000488494 KRTAP10-12P60413 245 aa7.08□□□□□ -1.28
ITGB1-215ENST00000488494 COA5Q86WW8 74 aa7.08□□□□□ -1.28
ITGB1-215ENST00000488494 LCE1AQ5T7P2 110 aa7.05□□□□□ -1.28
ITGB1-215ENST00000488494 KRTAP2-3P0C7H8 128 aa7.03□□□□□ -1.28
ITGB1-215ENST00000488494 KRTAP2-4Q9BYR9 128 aa7.03□□□□□ -1.28
ITGB1-215ENST00000488494 COX7CP15954 63 aa7□□□□□ -1.29
ITGB1-215ENST00000488494 CAMK2N1Q7Z7J9 78 aa6.95□□□□□ -1.3
ITGB1-215ENST00000488494 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
ITGB1-215ENST00000488494 SPRR2DP22532 72 aa6.93□□□□□ -1.3
ITGB1-215ENST00000488494 SEC61GP60059 68 aa6.93□□□□□ -1.3
ITGB1-215ENST00000488494 KRTAP4-12Q9BQ66 201 aa6.93□□□□□ -1.3
ITGB1-215ENST00000488494 H7BZZ5 65 aa6.92□□□□□ -1.3
ITGB1-215ENST00000488494 SERP1Q9Y6X1 66 aa6.91□□□□□ -1.3
ITGB1-215ENST00000488494 A0A0D9SG42 100 aa6.88□□□□□ -1.31
ITGB1-215ENST00000488494 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
ITGB1-215ENST00000488494 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.31
ITGB1-215ENST00000488494 A0A1B0GU33 70 aa6.81□□□□□ -1.32
ITGB1-215ENST00000488494 KRTAP2-2Q9BYT5 123 aa6.81□□□□□ -1.32
ITGB1-215ENST00000488494 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
ITGB1-215ENST00000488494 ANAPC13Q9BS18 74 aa6.78□□□□□ -1.32
ITGB1-215ENST00000488494 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
ITGB1-215ENST00000488494 KRTAP9-9Q9BYP9 154 aa6.75□□□□□ -1.33
ITGB1-215ENST00000488494 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
ITGB1-215ENST00000488494 KRTAP12-1P59990 96 aa6.71□□□□□ -1.34
ITGB1-215ENST00000488494 A0A1B0GU69 56 aa6.7□□□□□ -1.34
ITGB1-215ENST00000488494 KRTAP19-7Q3SYF9 63 aa6.67□□□□□ -1.34
ITGB1-215ENST00000488494 CCDC179H3BU77 68 aa6.64□□□□□ -1.35
ITGB1-215ENST00000488494 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
ITGB1-215ENST00000488494 H3BS24 57 aa6.62□□□□□ -1.35
ITGB1-215ENST00000488494 MT1EP04732 61 aa6.62□□□□□ -1.35
ITGB1-215ENST00000488494 A8MU10 97 aa6.6□□□□□ -1.35
ITGB1-215ENST00000488494 LCE5AQ5TCM9 118 aa6.57□□□□□ -1.36
ITGB1-215ENST00000488494 ATP5EP56381 51 aaPredicted RBP6.56□□□□□ -1.36
ITGB1-215ENST00000488494 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
ITGB1-215ENST00000488494 KRTAP19-5Q3LI72 72 aa6.52□□□□□ -1.37
ITGB1-215ENST00000488494 PRR15LQ9BU68 103 aa6.5□□□□□ -1.37
ITGB1-215ENST00000488494 DSTQ03001 7570 aaKnown RBP6.48□□□□□ -1.37
ITGB1-215ENST00000488494 C10orf95Q9H7T3 257 aa6.41□□□□□ -1.38
ITGB1-215ENST00000488494 LINC01558Q9Y6Z2 57 aa6.41□□□□□ -1.38
ITGB1-215ENST00000488494 LCE1DQ5T752 114 aa6.4□□□□□ -1.38
ITGB1-215ENST00000488494 TNP1P09430 55 aa6.38□□□□□ -1.39
ITGB1-215ENST00000488494 TMEM258P61165 79 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms