RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 CHKB-CPT1BH3BT56 60 aa3.51□□□□□ -1.85
PDAP1-203ENST00000488214 ACYP2P14621 99 aa3.51□□□□□ -1.85
PDAP1-203ENST00000488214 MPLKIPQ8TAP9 179 aa3.51□□□□□ -1.85
PDAP1-203ENST00000488214 KRTAP3-1Q9BYR8 98 aa3.5□□□□□ -1.85
PDAP1-203ENST00000488214 RNF213Q63HN8 5207 aa3.5□□□□□ -1.85
PDAP1-203ENST00000488214 S4R3F8 94 aa3.47□□□□□ -1.85
PDAP1-203ENST00000488214 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
PDAP1-203ENST00000488214 RPS28P62857 69 aaKnown RBP3.45□□□□□ -1.86
PDAP1-203ENST00000488214 LCA10Q71F78 164 aa3.44□□□□□ -1.86
PDAP1-203ENST00000488214 MUC2Q02817 5179 aa3.44□□□□□ -1.86
PDAP1-203ENST00000488214 SMIM26A0A096LP01 95 aa3.42□□□□□ -1.86
PDAP1-203ENST00000488214 SPTSSBQ8NFR3 76 aa3.42□□□□□ -1.86
PDAP1-203ENST00000488214 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
PDAP1-203ENST00000488214 KRTAP23-1A1A580 65 aa3.38□□□□□ -1.87
PDAP1-203ENST00000488214 FAT4Q6V0I7 4981 aa3.36□□□□□ -1.87
PDAP1-203ENST00000488214 PRR15LQ9BU68 103 aa3.36□□□□□ -1.87
PDAP1-203ENST00000488214 V9GYY9 64 aa3.36□□□□□ -1.87
PDAP1-203ENST00000488214 FLGP20930 4061 aaPredicted RBP3.36□□□□□ -1.87
PDAP1-203ENST00000488214 Q1T7F1 81 aa3.35□□□□□ -1.87
PDAP1-203ENST00000488214 CSAG1Q6PB30 78 aa3.35□□□□□ -1.87
PDAP1-203ENST00000488214 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
PDAP1-203ENST00000488214 A0A1B0GU69 56 aa3.34□□□□□ -1.87
PDAP1-203ENST00000488214 PSPHP1O15172 72 aa3.34□□□□□ -1.87
PDAP1-203ENST00000488214 M0R2T5 61 aa3.32□□□□□ -1.88
PDAP1-203ENST00000488214 SEC61GP60059 68 aa3.32□□□□□ -1.88
PDAP1-203ENST00000488214 MT1HP80294 61 aa3.32□□□□□ -1.88
PDAP1-203ENST00000488214 Q5VV11 94 aa3.29□□□□□ -1.88
PDAP1-203ENST00000488214 ADM2Q7Z4H4 148 aa3.29□□□□□ -1.88
PDAP1-203ENST00000488214 H0YAA0 97 aa3.26□□□□□ -1.89
PDAP1-203ENST00000488214 A6NED7 52 aa3.25□□□□□ -1.89
PDAP1-203ENST00000488214 P0C880 135 aa3.25□□□□□ -1.89
PDAP1-203ENST00000488214 KRTAP10-6P60371 365 aaPredicted RBP3.25□□□□□ -1.89
PDAP1-203ENST00000488214 A0A1B0GU33 70 aa3.22□□□□□ -1.89
PDAP1-203ENST00000488214 KRTAP19-4Q3LI73 84 aa3.22□□□□□ -1.89
PDAP1-203ENST00000488214 UQCR11O14957 56 aa3.21□□□□□ -1.9
PDAP1-203ENST00000488214 A0A0A0MQY5 61 aa3.19□□□□□ -1.9
PDAP1-203ENST00000488214 M0QZ58 72 aa3.19□□□□□ -1.9
PDAP1-203ENST00000488214 SPATA8Q6RVD6 105 aa3.19□□□□□ -1.9
PDAP1-203ENST00000488214 BRK1Q8WUW1 75 aa3.19□□□□□ -1.9
PDAP1-203ENST00000488214 MT2AP02795 61 aa3.18□□□□□ -1.9
PDAP1-203ENST00000488214 MIR22HGQ0VDD5 57 aa3.18□□□□□ -1.9
PDAP1-203ENST00000488214 KRTAP13-4Q3LI77 160 aa3.18□□□□□ -1.9
PDAP1-203ENST00000488214 R4GN34 69 aa3.18□□□□□ -1.9
PDAP1-203ENST00000488214 MT1FP04733 61 aa3.17□□□□□ -1.9
PDAP1-203ENST00000488214 KRTAP10-10P60014 251 aa3.16□□□□□ -1.9
PDAP1-203ENST00000488214 KRTAP9-8Q9BYQ0 159 aa3.16□□□□□ -1.9
PDAP1-203ENST00000488214 CDC42SE1Q9NRR8 79 aa3.16□□□□□ -1.9
PDAP1-203ENST00000488214 A0A0D9SG42 100 aa3.15□□□□□ -1.91
PDAP1-203ENST00000488214 A8MU10 97 aa3.15□□□□□ -1.91
PDAP1-203ENST00000488214 LINC01554Q52M75 96 aa3.14□□□□□ -1.91
PDAP1-203ENST00000488214 CRIPTQ9P021 101 aa3.14□□□□□ -1.91
PDAP1-203ENST00000488214 SPINT4Q6UDR6 99 aa3.07□□□□□ -1.92
PDAP1-203ENST00000488214 KRTAP19-1Q8IUB9 90 aa3.07□□□□□ -1.92
PDAP1-203ENST00000488214 SPRR2GQ9BYE4 73 aa3.07□□□□□ -1.92
PDAP1-203ENST00000488214 K7ERS5 55 aa3.06□□□□□ -1.92
PDAP1-203ENST00000488214 PRO0628Q9UI54 55 aa3.06□□□□□ -1.92
PDAP1-203ENST00000488214 KRTAP12-1P59990 96 aa3.05□□□□□ -1.92
PDAP1-203ENST00000488214 KRTAP12-2P59991 146 aa3.05□□□□□ -1.92
PDAP1-203ENST00000488214 KRTAP9-3Q9BYQ3 159 aa3.05□□□□□ -1.92
PDAP1-203ENST00000488214 A6NN06 94 aa3.03□□□□□ -1.92
PDAP1-203ENST00000488214 LOC100996750A0A140TA64 210 aa3.01□□□□□ -1.93
PDAP1-203ENST00000488214 KRTAP4-6Q9BYQ5 205 aa3.01□□□□□ -1.93
PDAP1-203ENST00000488214 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
PDAP1-203ENST00000488214 CAMK2N1Q7Z7J9 78 aa2.99□□□□□ -1.93
PDAP1-203ENST00000488214 PLAC4Q8WY50 150 aa2.99□□□□□ -1.93
PDAP1-203ENST00000488214 MT1BP07438 61 aa2.98□□□□□ -1.93
PDAP1-203ENST00000488214 PMAIP1Q13794 54 aa2.98□□□□□ -1.93
PDAP1-203ENST00000488214 USH2AO75445 5202 aa2.95□□□□□ -1.94
PDAP1-203ENST00000488214 KRTAP4-12Q9BQ66 201 aa2.93□□□□□ -1.94
PDAP1-203ENST00000488214 ROMO1P60602 79 aa2.92□□□□□ -1.94
PDAP1-203ENST00000488214 KRTAP9-6A0A140TA67 174 aa2.91□□□□□ -1.94
PDAP1-203ENST00000488214 KRTAP9-7A8MTY7 169 aa2.91□□□□□ -1.94
PDAP1-203ENST00000488214 KRTAP15-1Q3LI76 137 aa2.91□□□□□ -1.94
PDAP1-203ENST00000488214 LCE4AQ5TA78 99 aa2.91□□□□□ -1.94
PDAP1-203ENST00000488214 KRTAP4-8Q9BYQ9 185 aa2.9□□□□□ -1.95
PDAP1-203ENST00000488214 MT1XP80297 61 aa2.88□□□□□ -1.95
PDAP1-203ENST00000488214 C10orf95Q9H7T3 257 aa2.88□□□□□ -1.95
PDAP1-203ENST00000488214 PRO2289Q9P1D8 64 aa2.87□□□□□ -1.95
PDAP1-203ENST00000488214 SSPOA2VEC9 5147 aa2.87□□□□□ -1.95
PDAP1-203ENST00000488214 KRTAP10-5P60370 271 aa2.86□□□□□ -1.95
PDAP1-203ENST00000488214 KTN1-AS1Q86SY8 53 aa2.86□□□□□ -1.95
PDAP1-203ENST00000488214 KRTAP9-2Q9BYQ4 174 aa2.85□□□□□ -1.95
PDAP1-203ENST00000488214 PRAC1Q96KF2 57 aa2.84□□□□□ -1.95
PDAP1-203ENST00000488214 KRTAP9-4Q9BYQ2 154 aa2.84□□□□□ -1.95
PDAP1-203ENST00000488214 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.81□□□□□ -1.96
PDAP1-203ENST00000488214 TNP1P09430 55 aa2.81□□□□□ -1.96
PDAP1-203ENST00000488214 KRTAP25-1Q3LHN0 102 aa2.81□□□□□ -1.96
PDAP1-203ENST00000488214 KRTAP19-6Q3LI70 58 aa2.81□□□□□ -1.96
PDAP1-203ENST00000488214 KRTAP9-9Q9BYP9 154 aa2.81□□□□□ -1.96
PDAP1-203ENST00000488214 FSIP2Q5CZC0 6907 aa2.8□□□□□ -1.96
PDAP1-203ENST00000488214 LCE3BQ5TA77 95 aa2.79□□□□□ -1.96
PDAP1-203ENST00000488214 KRTAP10-7P60409 375 aaPredicted RBP2.77□□□□□ -1.97
PDAP1-203ENST00000488214 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
PDAP1-203ENST00000488214 CRCT1Q9UGL9 99 aa2.73□□□□□ -1.97
PDAP1-203ENST00000488214 LCE3AQ5TA76 89 aa2.72□□□□□ -1.97
PDAP1-203ENST00000488214 FCGBPQ9Y6R7 5405 aaPredicted RBP2.72□□□□□ -1.97
PDAP1-203ENST00000488214 PP632Q6XCG6 107 aa2.7□□□□□ -1.98
PDAP1-203ENST00000488214 KMT2DO14686 5537 aa2.67□□□□□ -1.98
PDAP1-203ENST00000488214 KRTAP4-8A0A0G2JLE6 195 aa2.66□□□□□ -1.98
PDAP1-203ENST00000488214 LCE5AQ5TCM9 118 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms