RNA–Protein interactions for RNA: ENST00000488171.5

CD55-209, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 3

Gene CD55, Length 1,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-209ENST00000488171 KRTAP19-8Q3LI54 63 aa8.68□□□□□ -1.02
CD55-209ENST00000488171 Q5VV11 94 aa8.66□□□□□ -1.02
CD55-209ENST00000488171 CYP4F30PQ9H0H9 118 aa8.65□□□□□ -1.02
CD55-209ENST00000488171 A6NN06 94 aa8.63□□□□□ -1.03
CD55-209ENST00000488171 KRTAP4-8A0A0G2JLE6 195 aa8.61□□□□□ -1.03
CD55-209ENST00000488171 KLKP1Q107X0 134 aa8.61□□□□□ -1.03
CD55-209ENST00000488171 A0A087WVE0 104 aa8.59□□□□□ -1.03
CD55-209ENST00000488171 TRAV22A0A0B4J277 110 aa8.57□□□□□ -1.04
CD55-209ENST00000488171 LOC101927531A0A1B0GV80 90 aa8.54□□□□□ -1.04
CD55-209ENST00000488171 KRTAP10-5P60370 271 aa8.54□□□□□ -1.04
CD55-209ENST00000488171 KRTAP19-4Q3LI73 84 aa8.5□□□□□ -1.05
CD55-209ENST00000488171 ACYP1P07311 99 aa8.49□□□□□ -1.05
CD55-209ENST00000488171 CRIPTQ9P021 101 aa8.47□□□□□ -1.05
CD55-209ENST00000488171 ATP5EP2Q5VTU8 51 aa8.46□□□□□ -1.06
CD55-209ENST00000488171 FAM240AA0A1B0GVK7 77 aa8.45□□□□□ -1.06
CD55-209ENST00000488171 UQCRQO14949 82 aa8.45□□□□□ -1.06
CD55-209ENST00000488171 HIST1H4AP62805 103 aaKnown RBP8.44□□□□□ -1.06
CD55-209ENST00000488171 LCE1DQ5T752 114 aa8.44□□□□□ -1.06
CD55-209ENST00000488171 H0Y9P7 68 aa8.42□□□□□ -1.06
CD55-209ENST00000488171 K7ERU9 68 aa8.42□□□□□ -1.06
CD55-209ENST00000488171 IMUPQ9GZP8 106 aa8.42□□□□□ -1.06
CD55-209ENST00000488171 ATOX1O00244 68 aa8.4□□□□□ -1.06
CD55-209ENST00000488171 NDUFC1O43677 76 aa8.38□□□□□ -1.07
CD55-209ENST00000488171 H0YAA0 97 aa8.37□□□□□ -1.07
CD55-209ENST00000488171 MUC12Q9UKN1 5478 aa8.35□□□□□ -1.07
CD55-209ENST00000488171 PCP4P48539 62 aa8.35□□□□□ -1.07
CD55-209ENST00000488171 NEBP20929 6669 aa8.32□□□□□ -1.08
CD55-209ENST00000488171 KRTAP5-9P26371 169 aa8.32□□□□□ -1.08
CD55-209ENST00000488171 A8MUN3 132 aa8.31□□□□□ -1.08
CD55-209ENST00000488171 LCE4AQ5TA78 99 aa8.31□□□□□ -1.08
CD55-209ENST00000488171 KRTAP4-7Q9BYR0 210 aa8.31□□□□□ -1.08
CD55-209ENST00000488171 J3QR89 54 aa8.29□□□□□ -1.08
CD55-209ENST00000488171 ADM2Q7Z4H4 148 aa8.28□□□□□ -1.08
CD55-209ENST00000488171 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
CD55-209ENST00000488171 LINC00208Q96KT6 92 aa8.28□□□□□ -1.08
CD55-209ENST00000488171 OCR1Q9BZK8 76 aa8.22□□□□□ -1.09
CD55-209ENST00000488171 MP68P56378 58 aa8.18□□□□□ -1.1
CD55-209ENST00000488171 SCGB1A1P11684 91 aa8.17□□□□□ -1.1
CD55-209ENST00000488171 KRTAP20-1Q3LI63 56 aa8.17□□□□□ -1.1
CD55-209ENST00000488171 KMT2DO14686 5537 aa8.17□□□□□ -1.1
CD55-209ENST00000488171 KRTAP4-9Q9BYQ8 210 aa8.16□□□□□ -1.1
CD55-209ENST00000488171 MT1XP80297 61 aa8.14□□□□□ -1.11
CD55-209ENST00000488171 PRO2289Q9P1D8 64 aa8.11□□□□□ -1.11
CD55-209ENST00000488171 P0C880 135 aa8.1□□□□□ -1.11
CD55-209ENST00000488171 PLAC4Q8WY50 150 aa8.08□□□□□ -1.12
CD55-209ENST00000488171 MDN1Q9NU22 5596 aa8.08□□□□□ -1.12
CD55-209ENST00000488171 R4GN34 69 aa8.07□□□□□ -1.12
CD55-209ENST00000488171 H3BPC8 53 aa8.06□□□□□ -1.12
CD55-209ENST00000488171 DMAC1Q96GE9 116 aa8.05□□□□□ -1.12
CD55-209ENST00000488171 C20orf197Q8N268 126 aa8.02□□□□□ -1.13
CD55-209ENST00000488171 SPRR2FQ96RM1 72 aa8.02□□□□□ -1.13
CD55-209ENST00000488171 M0QZ58 72 aa8□□□□□ -1.13
CD55-209ENST00000488171 KRTAP12-2P59991 146 aa7.96□□□□□ -1.14
CD55-209ENST00000488171 SPRR2EP22531 72 aa7.94□□□□□ -1.14
CD55-209ENST00000488171 SPRR2BP35325 72 aa7.94□□□□□ -1.14
CD55-209ENST00000488171 SPRR2AP35326 72 aa7.94□□□□□ -1.14
CD55-209ENST00000488171 KRTAP8-1Q8IUC2 63 aa7.94□□□□□ -1.14
CD55-209ENST00000488171 KRTAP4-2Q9BYR5 136 aa7.94□□□□□ -1.14
CD55-209ENST00000488171 KRTAP2-3P0C7H8 128 aa7.92□□□□□ -1.14
CD55-209ENST00000488171 KRTAP2-4Q9BYR9 128 aa7.92□□□□□ -1.14
CD55-209ENST00000488171 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
CD55-209ENST00000488171 KRTAP4-11Q9BYQ6 195 aa7.89□□□□□ -1.15
CD55-209ENST00000488171 LINC01554Q52M75 96 aa7.88□□□□□ -1.15
CD55-209ENST00000488171 TRAV7A0A075B6U4 112 aa7.86□□□□□ -1.15
CD55-209ENST00000488171 MT-ATP8P03928 68 aa7.86□□□□□ -1.15
CD55-209ENST00000488171 LCE1AQ5T7P2 110 aa7.84□□□□□ -1.16
CD55-209ENST00000488171 ACYP2P14621 99 aa7.8□□□□□ -1.16
CD55-209ENST00000488171 ANAPC13Q9BS18 74 aa7.8□□□□□ -1.16
CD55-209ENST00000488171 KRTAP10-7P60409 375 aaPredicted RBP7.77□□□□□ -1.17
CD55-209ENST00000488171 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
CD55-209ENST00000488171 SPTSSBQ8NFR3 76 aa7.71□□□□□ -1.17
CD55-209ENST00000488171 SVIPQ8NHG7 77 aa7.71□□□□□ -1.17
CD55-209ENST00000488171 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
CD55-209ENST00000488171 SPRR2DP22532 72 aa7.67□□□□□ -1.18
CD55-209ENST00000488171 KRTAP2-2Q9BYT5 123 aa7.66□□□□□ -1.18
CD55-209ENST00000488171 KRTAP2-1Q9BYU5 128 aa7.66□□□□□ -1.18
CD55-209ENST00000488171 CHKB-CPT1BH3BT56 60 aa7.63□□□□□ -1.19
CD55-209ENST00000488171 SNURFQ9Y675 71 aa7.59□□□□□ -1.19
CD55-209ENST00000488171 CCDC179H3BU77 68 aa7.58□□□□□ -1.2
CD55-209ENST00000488171 KRTAP13-4Q3LI77 160 aa7.51□□□□□ -1.21
CD55-209ENST00000488171 SPANXA2-OT1Q8N9U9 137 aa7.51□□□□□ -1.21
CD55-209ENST00000488171 COX7CP15954 63 aa7.5□□□□□ -1.21
CD55-209ENST00000488171 SERP2Q8N6R1 65 aa7.44□□□□□ -1.22
CD55-209ENST00000488171 CAMK2N1Q7Z7J9 78 aa7.38□□□□□ -1.23
CD55-209ENST00000488171 TMEM258P61165 79 aa7.36□□□□□ -1.23
CD55-209ENST00000488171 RPS28P62857 69 aaKnown RBP7.33□□□□□ -1.24
CD55-209ENST00000488171 COA5Q86WW8 74 aa7.32□□□□□ -1.24
CD55-209ENST00000488171 KRTAP19-7Q3SYF9 63 aa7.29□□□□□ -1.24
CD55-209ENST00000488171 A0A0D9SG42 100 aa7.22□□□□□ -1.25
CD55-209ENST00000488171 MT1EP04732 61 aa7.21□□□□□ -1.25
CD55-209ENST00000488171 SEC61GP60059 68 aa7.2□□□□□ -1.26
CD55-209ENST00000488171 SERP1Q9Y6X1 66 aa7.2□□□□□ -1.26
CD55-209ENST00000488171 SPATA8Q6RVD6 105 aa7.2□□□□□ -1.26
CD55-209ENST00000488171 ATP5EP56381 51 aaPredicted RBP7.18□□□□□ -1.26
CD55-209ENST00000488171 KRTAP19-3Q7Z4W3 81 aa7.18□□□□□ -1.26
CD55-209ENST00000488171 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
CD55-209ENST00000488171 A0A1B0GU33 70 aa7.13□□□□□ -1.27
CD55-209ENST00000488171 KRTAP23-1A1A580 65 aa7.13□□□□□ -1.27
CD55-209ENST00000488171 H7BZZ5 65 aa7.12□□□□□ -1.27
CD55-209ENST00000488171 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms