RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 KLKP1Q107X0 134 aa10.69□□□□□ -0.7
RNF38-208ENST00000488058 J3QR89 54 aa10.68□□□□□ -0.7
RNF38-208ENST00000488058 MP68P56378 58 aa10.67□□□□□ -0.7
RNF38-208ENST00000488058 OCR1Q9BZK8 76 aa10.66□□□□□ -0.7
RNF38-208ENST00000488058 SPRR2GQ9BYE4 73 aa10.65□□□□□ -0.7
RNF38-208ENST00000488058 NDUFC1O43677 76 aa10.64□□□□□ -0.71
RNF38-208ENST00000488058 Q5VV11 94 aa10.64□□□□□ -0.71
RNF38-208ENST00000488058 MT1BP07438 61 aa10.61□□□□□ -0.71
RNF38-208ENST00000488058 A8MUN3 132 aa10.59□□□□□ -0.71
RNF38-208ENST00000488058 IMUPQ9GZP8 106 aa10.59□□□□□ -0.71
RNF38-208ENST00000488058 KRTAP19-8Q3LI54 63 aa10.58□□□□□ -0.72
RNF38-208ENST00000488058 SYNE2Q8WXH0 6885 aaKnown RBP10.56□□□□□ -0.72
RNF38-208ENST00000488058 SCGB1A1P11684 91 aa10.52□□□□□ -0.73
RNF38-208ENST00000488058 A6NN06 94 aa10.51□□□□□ -0.73
RNF38-208ENST00000488058 CRIPTQ9P021 101 aa10.51□□□□□ -0.73
RNF38-208ENST00000488058 H3BPC8 53 aa10.47□□□□□ -0.73
RNF38-208ENST00000488058 H0YAA0 97 aa10.45□□□□□ -0.74
RNF38-208ENST00000488058 ADM2Q7Z4H4 148 aa10.43□□□□□ -0.74
RNF38-208ENST00000488058 KRTAP10-5P60370 271 aa10.35□□□□□ -0.75
RNF38-208ENST00000488058 KRTAP6-3Q3LI67 103 aa10.35□□□□□ -0.75
RNF38-208ENST00000488058 DMAC1Q96GE9 116 aa10.32□□□□□ -0.76
RNF38-208ENST00000488058 MT-ATP8P03928 68 aa10.31□□□□□ -0.76
RNF38-208ENST00000488058 K7ERU9 68 aa10.28□□□□□ -0.76
RNF38-208ENST00000488058 TRAV7A0A075B6U4 112 aa10.19□□□□□ -0.78
RNF38-208ENST00000488058 SMIM20Q8N5G0 67 aa10.19□□□□□ -0.78
RNF38-208ENST00000488058 P0C880 135 aa10.18□□□□□ -0.78
RNF38-208ENST00000488058 C20orf197Q8N268 126 aa10.17□□□□□ -0.78
RNF38-208ENST00000488058 R4GN34 69 aa10.16□□□□□ -0.78
RNF38-208ENST00000488058 ACYP2P14621 99 aa10.11□□□□□ -0.79
RNF38-208ENST00000488058 M0QZ58 72 aa10.1□□□□□ -0.79
RNF38-208ENST00000488058 PLAC4Q8WY50 150 aa10.08□□□□□ -0.8
RNF38-208ENST00000488058 KRTAP3-2Q9BYR7 98 aa10.06□□□□□ -0.8
RNF38-208ENST00000488058 SNURFQ9Y675 71 aa10.03□□□□□ -0.8
RNF38-208ENST00000488058 PRO2289Q9P1D8 64 aa10.01□□□□□ -0.81
RNF38-208ENST00000488058 SPTSSBQ8NFR3 76 aa10□□□□□ -0.81
RNF38-208ENST00000488058 LINC01554Q52M75 96 aa9.99□□□□□ -0.81
RNF38-208ENST00000488058 CHKB-CPT1BH3BT56 60 aa9.98□□□□□ -0.81
RNF38-208ENST00000488058 MT1XP80297 61 aa9.96□□□□□ -0.82
RNF38-208ENST00000488058 NEBP20929 6669 aa9.92□□□□□ -0.82
RNF38-208ENST00000488058 KRTAP5-9P26371 169 aa9.87□□□□□ -0.83
RNF38-208ENST00000488058 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
RNF38-208ENST00000488058 MUC12Q9UKN1 5478 aa9.85□□□□□ -0.83
RNF38-208ENST00000488058 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
RNF38-208ENST00000488058 KRTAP20-1Q3LI63 56 aa9.8□□□□□ -0.84
RNF38-208ENST00000488058 KMT2DO14686 5537 aa9.7□□□□□ -0.86
RNF38-208ENST00000488058 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
RNF38-208ENST00000488058 SPRR2FQ96RM1 72 aa9.67□□□□□ -0.86
RNF38-208ENST00000488058 KRTAP8-1Q8IUC2 63 aa9.66□□□□□ -0.86
RNF38-208ENST00000488058 COA5Q86WW8 74 aa9.6□□□□□ -0.87
RNF38-208ENST00000488058 MDN1Q9NU22 5596 aa9.57□□□□□ -0.88
RNF38-208ENST00000488058 COX7CP15954 63 aa9.57□□□□□ -0.88
RNF38-208ENST00000488058 KRTAP4-8A0A0G2JLE6 195 aa9.54□□□□□ -0.88
RNF38-208ENST00000488058 KRTAP4-8Q9BYQ9 185 aa9.54□□□□□ -0.88
RNF38-208ENST00000488058 SPRR2EP22531 72 aa9.53□□□□□ -0.88
RNF38-208ENST00000488058 SPRR2BP35325 72 aa9.53□□□□□ -0.88
RNF38-208ENST00000488058 SPRR2AP35326 72 aa9.53□□□□□ -0.88
RNF38-208ENST00000488058 KRTAP10-7P60409 375 aaPredicted RBP9.53□□□□□ -0.88
RNF38-208ENST00000488058 KRTAP13-4Q3LI77 160 aa9.52□□□□□ -0.89
RNF38-208ENST00000488058 KRTAP10-12P60413 245 aa9.44□□□□□ -0.9
RNF38-208ENST00000488058 SEC61GP60059 68 aa9.43□□□□□ -0.9
RNF38-208ENST00000488058 CYSTM1Q9H1C7 97 aa9.42□□□□□ -0.9
RNF38-208ENST00000488058 SERP1Q9Y6X1 66 aa9.42□□□□□ -0.9
RNF38-208ENST00000488058 H7BZZ5 65 aa9.4□□□□□ -0.9
RNF38-208ENST00000488058 CAMK2N1Q7Z7J9 78 aa9.38□□□□□ -0.91
RNF38-208ENST00000488058 KRTAP2-3P0C7H8 128 aa9.36□□□□□ -0.91
RNF38-208ENST00000488058 LCE1AQ5T7P2 110 aa9.36□□□□□ -0.91
RNF38-208ENST00000488058 KRTAP2-4Q9BYR9 128 aa9.36□□□□□ -0.91
RNF38-208ENST00000488058 A0A0D9SG42 100 aa9.31□□□□□ -0.92
RNF38-208ENST00000488058 ANAPC13Q9BS18 74 aa9.28□□□□□ -0.92
RNF38-208ENST00000488058 SPATA8Q6RVD6 105 aa9.27□□□□□ -0.93
RNF38-208ENST00000488058 A0A1B0GU33 70 aa9.24□□□□□ -0.93
RNF38-208ENST00000488058 SPRR2DP22532 72 aa9.21□□□□□ -0.94
RNF38-208ENST00000488058 SPINT4Q6UDR6 99 aa9.18□□□□□ -0.94
RNF38-208ENST00000488058 A0A1B0GU69 56 aa9.13□□□□□ -0.95
RNF38-208ENST00000488058 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
RNF38-208ENST00000488058 KRTAP12-1P59990 96 aa9.05□□□□□ -0.96
RNF38-208ENST00000488058 KRTAP2-2Q9BYT5 123 aa9.04□□□□□ -0.96
RNF38-208ENST00000488058 KRTAP2-1Q9BYU5 128 aa9.04□□□□□ -0.96
RNF38-208ENST00000488058 SMIM26A0A096LP01 95 aa8.98□□□□□ -0.97
RNF38-208ENST00000488058 A8MU10 97 aa8.94□□□□□ -0.98
RNF38-208ENST00000488058 ATP5EP56381 51 aaPredicted RBP8.94□□□□□ -0.98
RNF38-208ENST00000488058 LCE3BQ5TA77 95 aa8.94□□□□□ -0.98
RNF38-208ENST00000488058 KRTAP19-7Q3SYF9 63 aa8.89□□□□□ -0.99
RNF38-208ENST00000488058 PRR15LQ9BU68 103 aa8.86□□□□□ -0.99
RNF38-208ENST00000488058 MT1EP04732 61 aa8.82□□□□□ -1
RNF38-208ENST00000488058 LINC01558Q9Y6Z2 57 aa8.75□□□□□ -1.01
RNF38-208ENST00000488058 KRTAP19-3Q7Z4W3 81 aa8.74□□□□□ -1.01
RNF38-208ENST00000488058 LCE5AQ5TCM9 118 aa8.73□□□□□ -1.01
RNF38-208ENST00000488058 TMEM258P61165 79 aa8.72□□□□□ -1.01
RNF38-208ENST00000488058 KRTAP19-5Q3LI72 72 aa8.72□□□□□ -1.01
RNF38-208ENST00000488058 C10orf95Q9H7T3 257 aa8.66□□□□□ -1.02
RNF38-208ENST00000488058 TNP1P09430 55 aa8.63□□□□□ -1.03
RNF38-208ENST00000488058 LCE3AQ5TA76 89 aa8.57□□□□□ -1.04
RNF38-208ENST00000488058 UQCR11O14957 56 aa8.55□□□□□ -1.04
RNF38-208ENST00000488058 DSTQ03001 7570 aaKnown RBP8.55□□□□□ -1.04
RNF38-208ENST00000488058 MT1GP13640 62 aa8.53□□□□□ -1.04
RNF38-208ENST00000488058 PP632Q6XCG6 107 aa8.49□□□□□ -1.05
RNF38-208ENST00000488058 GPR98Q8WXG9 6306 aa8.47□□□□□ -1.05
RNF38-208ENST00000488058 MT1LQ93083 61 aa8.44□□□□□ -1.06
RNF38-208ENST00000488058 MT1MQ8N339 61 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms