RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
HMG20B-211ENST00000486028 MMP24-AS1A0A0U1RRL7 71 aa6.37□□□□□ -1.39
HMG20B-211ENST00000486028 M0R2T5 61 aa6.36□□□□□ -1.39
HMG20B-211ENST00000486028 MRPL34Q9BQ48 92 aaKnown RBP6.36□□□□□ -1.39
HMG20B-211ENST00000486028 FLGP20930 4061 aaPredicted RBP6.36□□□□□ -1.39
HMG20B-211ENST00000486028 RBM12B-AS1Q9P1G2 102 aa6.33□□□□□ -1.4
HMG20B-211ENST00000486028 PSPHP1O15172 72 aa6.32□□□□□ -1.4
HMG20B-211ENST00000486028 SPINK7P58062 85 aa6.32□□□□□ -1.4
HMG20B-211ENST00000486028 TP53AIP1Q9HCN2 124 aa6.32□□□□□ -1.4
HMG20B-211ENST00000486028 A8MUN3 132 aa6.31□□□□□ -1.4
HMG20B-211ENST00000486028 NDUFS5O43920 106 aa6.31□□□□□ -1.4
HMG20B-211ENST00000486028 HRES1P13985 223 aa6.31□□□□□ -1.4
HMG20B-211ENST00000486028 Q5VV11 94 aa6.3□□□□□ -1.4
HMG20B-211ENST00000486028 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
HMG20B-211ENST00000486028 KRTAP10-6P60371 365 aaPredicted RBP6.28□□□□□ -1.4
HMG20B-211ENST00000486028 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
HMG20B-211ENST00000486028 COA5Q86WW8 74 aa6.26□□□□□ -1.41
HMG20B-211ENST00000486028 SEC61GP60059 68 aa6.25□□□□□ -1.41
HMG20B-211ENST00000486028 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
HMG20B-211ENST00000486028 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
HMG20B-211ENST00000486028 PRR15LQ9BU68 103 aa6.23□□□□□ -1.41
HMG20B-211ENST00000486028 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
HMG20B-211ENST00000486028 LINC01558Q9Y6Z2 57 aa6.21□□□□□ -1.42
HMG20B-211ENST00000486028 Q5W150 140 aa6.2□□□□□ -1.42
HMG20B-211ENST00000486028 IGKV2D-30A0A075B6S6 120 aa6.18□□□□□ -1.42
HMG20B-211ENST00000486028 IGKV2-30P06310 120 aa6.18□□□□□ -1.42
HMG20B-211ENST00000486028 C7orf65Q6ZTY9 151 aa6.16□□□□□ -1.42
HMG20B-211ENST00000486028 LCA10Q71F78 164 aa6.14□□□□□ -1.43
HMG20B-211ENST00000486028 CDC42SE1Q9NRR8 79 aa6.14□□□□□ -1.43
HMG20B-211ENST00000486028 A6NED7 52 aa6.13□□□□□ -1.43
HMG20B-211ENST00000486028 A8MU10 97 aa6.12□□□□□ -1.43
HMG20B-211ENST00000486028 PRAC1Q96KF2 57 aa6.11□□□□□ -1.43
HMG20B-211ENST00000486028 FSIP2Q5CZC0 6907 aa6.1□□□□□ -1.43
HMG20B-211ENST00000486028 KRTAP9-8Q9BYQ0 159 aa6.1□□□□□ -1.43
HMG20B-211ENST00000486028 A6NN06 94 aa6.09□□□□□ -1.43
HMG20B-211ENST00000486028 H1FX-AS1Q4G0G2 97 aa6.09□□□□□ -1.43
HMG20B-211ENST00000486028 KTN1-AS1Q86SY8 53 aa6.09□□□□□ -1.43
HMG20B-211ENST00000486028 SPTSSBQ8NFR3 76 aa6.06□□□□□ -1.44
HMG20B-211ENST00000486028 ACYP2P14621 99 aa6.05□□□□□ -1.44
HMG20B-211ENST00000486028 KRTAP9-6A0A140TA67 174 aa6.04□□□□□ -1.44
HMG20B-211ENST00000486028 MT2AP02795 61 aa6.03□□□□□ -1.44
HMG20B-211ENST00000486028 DMAC1Q96GE9 116 aa6.01□□□□□ -1.45
HMG20B-211ENST00000486028 KRTAP10-10P60014 251 aa6□□□□□ -1.45
HMG20B-211ENST00000486028 MT1FP04733 61 aa5.98□□□□□ -1.45
HMG20B-211ENST00000486028 CRCT1Q9UGL9 99 aa5.98□□□□□ -1.45
HMG20B-211ENST00000486028 KRTAP9-7A8MTY7 169 aa5.91□□□□□ -1.46
HMG20B-211ENST00000486028 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
HMG20B-211ENST00000486028 SPATA8Q6RVD6 105 aa5.9□□□□□ -1.46
HMG20B-211ENST00000486028 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.46
HMG20B-211ENST00000486028 S4R3F8 94 aa5.9□□□□□ -1.46
HMG20B-211ENST00000486028 A0A1B0GU69 56 aa5.89□□□□□ -1.47
HMG20B-211ENST00000486028 USH2AO75445 5202 aa5.87□□□□□ -1.47
HMG20B-211ENST00000486028 CSAG1Q6PB30 78 aa5.86□□□□□ -1.47
HMG20B-211ENST00000486028 LCE4AQ5TA78 99 aa5.85□□□□□ -1.47
HMG20B-211ENST00000486028 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
HMG20B-211ENST00000486028 UQCR11O14957 56 aa5.81□□□□□ -1.48
HMG20B-211ENST00000486028 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
HMG20B-211ENST00000486028 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
HMG20B-211ENST00000486028 KRTAP4-6Q9BYQ5 205 aa5.76□□□□□ -1.49
HMG20B-211ENST00000486028 SSPOA2VEC9 5147 aa5.76□□□□□ -1.49
HMG20B-211ENST00000486028 KRTAP4-12Q9BQ66 201 aa5.75□□□□□ -1.49
HMG20B-211ENST00000486028 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
HMG20B-211ENST00000486028 ADM2Q7Z4H4 148 aa5.68□□□□□ -1.5
HMG20B-211ENST00000486028 FCGBPQ9Y6R7 5405 aaPredicted RBP5.65□□□□□ -1.5
HMG20B-211ENST00000486028 LINC01554Q52M75 96 aa5.64□□□□□ -1.51
HMG20B-211ENST00000486028 KRTAP4-8Q9BYQ9 185 aa5.64□□□□□ -1.51
HMG20B-211ENST00000486028 H0YAA0 97 aa5.62□□□□□ -1.51
HMG20B-211ENST00000486028 KRTAP19-6Q3LI70 58 aa5.62□□□□□ -1.51
HMG20B-211ENST00000486028 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
HMG20B-211ENST00000486028 CRIPTQ9P021 101 aa5.61□□□□□ -1.51
HMG20B-211ENST00000486028 NDUFAF8A1L188 74 aa5.56□□□□□ -1.52
HMG20B-211ENST00000486028 A0A1B0GU33 70 aa5.55□□□□□ -1.52
HMG20B-211ENST00000486028 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.55□□□□□ -1.52
HMG20B-211ENST00000486028 KRTAP19-8Q3LI54 63 aa5.55□□□□□ -1.52
HMG20B-211ENST00000486028 LCE5AQ5TCM9 118 aa5.53□□□□□ -1.52
HMG20B-211ENST00000486028 MT1BP07438 61 aa5.52□□□□□ -1.53
HMG20B-211ENST00000486028 MACF1Q9UPN3 7388 aaKnown RBP5.5□□□□□ -1.53
HMG20B-211ENST00000486028 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
HMG20B-211ENST00000486028 KRTAP25-1Q3LHN0 102 aa5.46□□□□□ -1.54
HMG20B-211ENST00000486028 SYNE2Q8WXH0 6885 aaKnown RBP5.45□□□□□ -1.54
HMG20B-211ENST00000486028 K7ERS5 55 aa5.44□□□□□ -1.54
HMG20B-211ENST00000486028 P0C880 135 aa5.44□□□□□ -1.54
HMG20B-211ENST00000486028 R4GN34 69 aa5.42□□□□□ -1.54
HMG20B-211ENST00000486028 M0QZ58 72 aa5.38□□□□□ -1.55
HMG20B-211ENST00000486028 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
HMG20B-211ENST00000486028 PLAC4Q8WY50 150 aa5.34□□□□□ -1.55
HMG20B-211ENST00000486028 ROMO1P60602 79 aa5.33□□□□□ -1.56
HMG20B-211ENST00000486028 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
HMG20B-211ENST00000486028 KRTAP6-3Q3LI67 103 aa5.26□□□□□ -1.57
HMG20B-211ENST00000486028 KRTAP13-4Q3LI77 160 aa5.23□□□□□ -1.57
HMG20B-211ENST00000486028 MT1XP80297 61 aa5.21□□□□□ -1.58
HMG20B-211ENST00000486028 CAMK2N1Q7Z7J9 78 aa5.2□□□□□ -1.58
HMG20B-211ENST00000486028 A0A0D9SG42 100 aa5.17□□□□□ -1.58
HMG20B-211ENST00000486028 LCE1DQ5T752 114 aa5.13□□□□□ -1.59
HMG20B-211ENST00000486028 NEBP20929 6669 aa5.12□□□□□ -1.59
HMG20B-211ENST00000486028 KRTAP12-1P59990 96 aa5.09□□□□□ -1.59
HMG20B-211ENST00000486028 KRTAP12-2P59991 146 aa5.08□□□□□ -1.6
HMG20B-211ENST00000486028 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
HMG20B-211ENST00000486028 SPINT4Q6UDR6 99 aa5.05□□□□□ -1.6
HMG20B-211ENST00000486028 MT3P25713 68 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 392.4 ms